GCB 2003: Neuherberg/Garching near Munich, Germany
Proceedings of the German Conference on Bioinformatics, GCB 2003, October 12-14, 2003, Neuherberg/Garching near Munich, Germany. 2003
Ingrid G. Abfalter, Christoph Flamm, Peter F. Stadler: Design of multi-stable nucleid acid sequences. 1-7
Alexey V. Antonov, Igor V. Tetko, Michael T. Mader, Jan Budczies, Hans-Werner Mewes: Exploiting gene interaction information from microarray expression data for cancer classification. 9-14
Peter F. Arndt, Terence Hwa: Regional and Time-resolved Mutation Patterns of the Human Genome. 15-19
Constantin Bannert, Jens Stoye: Evaluation of the Jumping Alignment algorithm with artificial and biological data. 21-25
Panos Dafas, Dan M. Bolser, Jacek Gomoluch, Jong Park, Michael Schroeder: Fast and efficient computation of domain-domaininteractions from known protein structures in the PDB. 27-32
André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. 33-39
Florian Frommlet, Andreas Futschik, Malgorzata Bogdan: Sequence alignments with multiple scoring matrices. 41-45
Jörg Galle, Markus Loeffler, Dirk Drasdo: An individual cell-based model of the growth regulation of epithelial cell-populations in-vitro. 47-51
Mark Gerstein: Computational Proteomics: Genome-scale Analysis of Protein Structure, Function, & Evolution(Invited Talk). 53
Jens Hansen, Thomas Floss, Petra van Sloun, Claudia Seisenberger, Marc Meidlinger, Ernst Martin Füchtbauer, Franz Vauti, Hans-Hennig Arnold, Frank Schnütgen, Harald von Melchner, Patricia Ruiz, Wolfgang Wurst: Functional Analysis of the Mammalian Genome by Large Scale Gene Trap Mutagenesis. 55-56
Ivo L. Hofacker, Peter F. Stadler, Roman R. Stocsits: Conserved RNA secondary structures in viral genomes: A survey. 57-62
Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender: Recognition of multiple patterns in unaligned sets of sequences. Comparison of kernel clustering method with other methods. 63-68
Rainer König, Roland Eils: Gene expression analysis on biochemical networks with the potts spin model. 69-72
Dirk Klingbiel, Henning Witt, Boris Ivandic, Dieter Weichenhan, Hugo A. Katus, Patricia Ruiz, Lutz Dümbgen: Singular value decomposition for feature selection in gene chips. 73-76
David P. Kreil, Richard P. Auburn, Lisa A. Meadows, Steven Russell, Gos Micklem: Quantitative microarray spot profile optimization: A systematic evaluation of buffer/slide combinations. 77-81
Martin J. Lercher, Laurence D. Hurst: Gene Expression, Gene Clusters, and Genomic Regionality in Rates of Evolution. 83-87
Tie-Fei Liu, Wing-Kin Sung, Pei-lin Mao, Ankush Mittal: Tag SNP selection by brute-force and heuristic algorithms. 89-93
Tobias Müller, Sven Rahmann, Thomas Dandekar, Matthias Wolf: Robust estimation of the phylogeny of Chlorophyceae(Chlorophyta)based on profile distances. 97-101
Thomas Meinel, Martin Vingron, Antje Krause: The SYSTERS protein family database: Taxon-related protein family size distributions and singleton frequencies. 103-108
Christine A. Orengo: A Structural Perspective on Genome Evolution(Invited Talk). 109-110
Philipp Pagel, Hans-Werner Mewes, Dmitrij Frishman: Conservation of protein-protein interactions among Ascomycota species. 111-115
Stefan A. Rensing, Daniel Lang, Ralf Reski: In silico prediction of UTR repeats using clustered EST data. 117-122
Falk Schubert, Jasmin Müller, Björn Fritz, Peter Lichter, Roland Eils: Understanding the classification of tumors with a support-vector-machine: A case-based explanation scheme. 123-127
Stefan Schuster, Steffen Klamt, Jörg Stelling: Making predictions about robustness and flexibility from metabolic network structure. 129-134
Florian Sohler, Daniel Hanisch, Ralf Zimmer: New methods for joint analysis of biological networks and expression data. 141-146
Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel: Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. 147-152
Aik Choon Tan, David Gilbert, Yves Deville: Integrative machine learning approach for multi-class SCOP protein fold classification. 153-159
Juris Viksna, David Gilbert, Gilleain M. Torrance: Protein structure comparison based o n profiles of topological motifs: a feasible way to deal with information from negative examples. 159-165
Claudia Voigt, Steffen Möller, Saleh M. Ibrahim, Pablo Serrano-Fernández: Non-linear conversion between genetic and physical chromosomal distances. 167-172
Nils Weskamp, Daniel Kuhn, Eyke Hüllermeier, Gerhard Klebe: Efficient Similarity Search in Protein Structure Databases: Improving Cliqae-Detection through Clique Hashing. 179-184
Owen White: Bacterial Annotation Tools. 187



