GCCB 2006: Eilat, Israel

Sequence Analysis

• Chunyan Wang, Paul M. K. Gordon, Andrei L. Turinsky, Jason Burgess, Terry Dalton, Christoph W. Sensen:
  Combining a High-Throughput Bioinformatics Grid and Bioinformatics Web Services. 1-10
  
• Thomas Rattei, Mathias C. Walter, Roland Arnold, David P. Anderson, Hans-Werner Mewes:
  Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis. 11-18
  
• Patrick May, Gunnar W. Klau, Markus Bauer, Thomas Steinke:
  Accelerated microRNA-Precursor Detection Using the Smith-Waterman Algorithm on FPGAs. 19-32
  

Grids for Screening and Property Prediction

• Andrew D. Arenson, Ludmila Bakhireva, Tina Chambers, Christina Deximo, Tatiana Foroud, Joseph Jacobson, Sandra Jacobson, Kenneth Lyons Jones, Sarah Mattson, Philip May, Elizabeth Moore, Kimberly Ogle, Edward Riley, Luther Robinson, Jeffrey Rogers, Ann Streissguth, Michel Tavares, Joseph Urbanski, Helen Yezerets, Craig A. Stewart:
  Implementation of a Distributed Architecture for Managing Collection and Dissemination of Data for Fetal Alcohol Spectrum Disorders Research. 33-44
  
• Nicolas Jacq, Vincent Breton, Hsin-Yen Chen, Li-Yung Ho, Martin Hofmann, Hurng-Chun Lee, Yannick Legré, Simon C. Lin, Astrid Maaß, Emmanuel Medernach, Ivan Merelli, Luciano Milanesi, Giulio Rastelli, Matthieu Reichstadt, Jean Salzemann, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Ying-Ta Wu, Marc Zimmermann:
  Grid-Enabled High Throughput Virtual Screening. 45-59
  
• Uko Maran, Sulev Sild, Paolo Mazzatorta, Mosé Casalegno, Emilio Benfenati, Mathilde Romberg:
  Grid Computing for the Estimation of Toxicity: Acute Toxicity on Fathead Minnow (Pimephales promelas). 60-74
  
• Xueping Quan, Chris Walton, Dietlind L. Gerloff, Joanna L. Sharman, David Robertson:
  Peer-to-Peer Experimentation in Protein Structure Prediction: An Architecture, Experiment and Initial Results. 75-98
  

Data Management

• Nigel McCoy, Shaun Mahony, Aaron Golden:
  Gene Prediction in Metagenomic Libraries Using the Self Organising Map and High Performance Computing Techniques. 99-109
  
• Mark Silberstein, Dan Geiger, Assaf Schuster:
  A Distributed System for Genetic Linkage Analysis. 110-123
  
• Michael A. Johnston, Jordi Villà-Freixa:
  Enabling Data Sharing and Collaboration in Complex Systems Applications. 124-140
  
• Samatha Kottha, Kumar Abhinav, Ralph Müller-Pfefferkorn, Hartmut Mix:
  Accessing Bio-databases with OGSA-DAI - A Performance Analysis. 141-156
  

Collaborative Environments

• Lars Ailo Bongo, Grant Wallace, Tore Larsen, Kai Li, Olga G. Troyanskaya:
  Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks. 157-174
  
• Im Young Jung, In Soon Cho, Heon Young Yeom, Hee S. Kweon, Jysoo Lee:
  HVEM DataGrid: Implementation of a Biologic Data Management System for Experiments with High Voltage Electron Microscope. 175-190