10. ISMB 2002:
Edmondon, Alberta, Canada (Supplement of Bioinformatics)
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, August 3-7, 2002, Edmonton, Alberta, Canada.
2002 
- Janice I. Glasgow, Burkhard Rost:
ISMB 2002.
1-4
- Ajit Narayanan, Xikun Wu, Zheng Rong Yang:
Mining viral protease data to extract cleavage knowledge.
5-13
- Ori Sasson, Nathan Linial, Michal Linial:
The metric space of proteins-comparative study of clustering algorithms.
14-21
- Nicholas R. Steffen, S. D. Murphy, L. Tolleri, G. Wesley Hatfield, Richard H. Lathrop:
DNA sequence and structure: direct and indirect recognition in protein-DNA binding.
22-30
- Amy M. Hauth, Deborah Joseph:
Beyond tandem repeats: complex pattern structures and distant regions of similarity.
31-37
- Michael J. Wise:
The POPPs: clustering and searching using peptide probability profiles.
38-45
- Pier Luigi Martelli, Piero Fariselli, Anders Krogh, Rita Casadio:
A sequence-profile-based HMM for predicting and discriminating beta barrel membrane proteins.
46-53
- Chris Bystroff, Yu Shao:
Fully automated ab initio protein structure prediction using I-STES, HMMSTR and ROSETTA.
54-61
- Gianluca Pollastri, Pierre Baldi:
Prediction of contact maps by GIOHMMs and recurrent neural networks using lateral propagation from all four cardinal corners.
62-70
- Tal Pupko, Rachel E. Bell, Itay Mayrose, Fabian Glaser, Nir Ben-Tal:
Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues.
71-77
- Rajesh Nair, Burkhard Rost:
Inferring sub-cellular localization through automated lexical analysis.
78-86
- Ekaterina Myasnikova, Anastassia Samsonova, Maria Samsonova, John Reinitz:
Support vector regression applied to the determination of the developmental age of a Drosophila embryo from its segmentation gene expression patterns.
87-95
- Wolfgang Huber, Anja von Heydebreck, Holger Sültmann, Annemarie Poustka, Martin Vingron:
Variance stabilization applied to microarray data calibration and to the quantification of differential expression.
96-104
- Blythe Durbin, Johanna S. Hardin, Douglas M. Hawkins, David M. Rocke:
A variance-stabilizing transformation for gene-expression microarray data.
105-110
- M. Sultan, Dennis A. Wigle, C. A. Cumbaa, M. Maziarz, Janice I. Glasgow, Ming-Sound Tsao, Igor Jurisica:
Binary tree-structured vector quantization approach to clustering and visualizing microarray data.
111-119
- Peter J. Park, Lu Tian, Isaac S. Kohane:
Linking gene expression data with patient survival times using partial least squares.
120-127
- Rohan J. Fernandes, Steven Skiena:
Microarray synthesis through multiple-use PCR primer design.
128-135
- Amos Tanay, Roded Sharan, Ron Shamir:
Discovering statistically significant biclusters in gene expression data.
136-144
- Daniel Hanisch, Alexander Zien, Ralf Zimmer, Thomas Lengauer:
Co-clustering of biological networks and gene expression data.
145-154
- Fabian Model, Thomas König, Christian Piepenbrock, Péter Adorján:
Statistical process control for large scale microarray experiments.
155-163
- J. B. Tobler, Michael Molla, Emile F. Nuwaysir, R. D. Green, Jude W. Shavlik:
Evaluating machine learning approaches for aiding probe selection for gene-expression arrays.
164-171
- Chaim Linhart, Ron Shamir:
The degenerate primer design problem.
172-181
- Steffen Heber, Max A. Alekseyev, Sing-Hoi Sze, Haixu Tang, Pavel A. Pevzner:
Splicing graphs and EST assembly problem.
181-188
- Maáyan Fishelson, Dan Geiger:
Exact genetic linkage computations for general pedigrees.
189-198
- Teemu Kivioja, Mikko Arvas, Kari Kataja, Merja Penttilä, Hans Söderlund, Esko Ukkonen:
Assigning probes into a small number of pools separable by electrophoresis.
199-206
- Daniel L. Rubin, Farhad Shafa, Diane E. Oliver, Micheal Hewett, Russ B. Altman:
Representing genetic sequence data for pharmacogenomics: an evolutionary approach using ontological and relational models.
207-215
- V. Anne Smith, Erich D. Jarvis, Alexander J. Hartemink:
Evaluating functional network inference using simulations of complex biological systems.
216-224
- Peter D. Karp, Suzanne M. Paley, Pedro Romero:
The Pathway Tools software.
225-232
- Trey Ideker, Owen Ozier, Benno Schwikowski, Andrew F. Siegel:
Discovering regulatory and signalling circuits in molecular interaction networks.
233-240
- Irene M. Ong, Jeremy D. Glasner, David Page:
Modelling regulatory pathways in E. coli from time series expression profiles.
241-248
- Michael Krauthammer, Pauline Kra, Ivan Iossifov, Shawn M. Gomez, George Hripcsak, Vasileios Hatzivassiloglou, Carol Friedman, Andrey Rzhetsky:
Of truth and pathways: chasing bits of information through myriads of articles.
249-257
- Dana Pe'er, Aviv Regev, Amos Tanay:
Minreg: Inferring an active regulator set.
258-267
- Koji Tsuda, Taishin Kin, Kiyoshi Asai:
Marginalized kernels for biological sequences.
268-275
- Jean-Philippe Vert:
A tree kernel to analyse phylogenetic profiles.
276-284
- Cara Stockham, Li-San Wang, Tandy Warnow:
Statistically based postprocessing of phylogenetic analysis by clustering.
285-293
- Daniel P. Fasulo, Aaron L. Halpern, Ian M. Dew, Clark M. Mobarry:
Efficiently detecting polymorphisms during the fragment assembly process.
294-302
- Dmitry Korkin, Lev Goldfarb:
Multiple genome rearrangement: a general approach via the evolutionary genome graph.
303-311
- Michael Höhl, Stefan Kurtz, Enno Ohlebusch:
Efficient multiple genome alignment.
312-320
- Kyungsook Han, Yujin Lee, Wootaek Kim:
PseudoViewer: automatic visualization of RNA pseudoknots.
321-328
- Gabriel Moreno-Hagelsieb, Julio Collado-Vides:
A powerful non-homology method for the prediction of operons in prokaryotes.
329-336
- Brian Tjaden, David R. Haynor, Sergey Stolyar, Carsten Rosenow, Eugene Kolker:
Identifying operons and untranslated regions of transcripts using Escherichia coli RNA expression analysis.
337-344
- Dirk Husmeier, Gráinne McGuire:
Detecting recombination with MCMC.
345-353
- Eleazar Eskin, Pavel A. Pevzner:
Finding composite regulatory patterns in DNA sequences.
354-363
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