12. ISMB / 3. ECCB 2004:
Glasgow,
Scotland,
UK (Supplement of Bioinformatics)
Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, Glasgow, UK, July 31-August 4, 2004.
2004 BibTeX
- Janet M. Thornton, David Gilbert, Catherine Brooksbank:
ISMB/ECCB 2004.
1-2
Electronic Edition (link) BibTeX
- Janet M. Thornton, David Gilbert, Catherine Brooksbank:
ISMB/ECCB 2004 Organization.
3-5
Electronic Edition (link) BibTeX
- Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Minoru Kanehisa, Tatsuya Akutsu, Hiroshi Mamitsuka:
Application of a new probabilistic model for recognizing complex patterns in glycans.
6-14
Electronic Edition (link) BibTeX
- Chitta Baral, Karen Chancellor, Nam Tran, Nhan Tran, Anna M. Joy, Michael E. Berens:
A knowledge based approach for representing and reasoning about signaling networks.
15-22
Electronic Edition (link) BibTeX
- Ziv Bar-Joseph, Shlomit Farkash, David K. Gifford, Itamar Simon, Roni Rosenfeld:
Deconvolving cell cycle expression data with complementary information.
23-30
Electronic Edition (link) BibTeX
- Gill Bejerano, David Haussler, Mathieu Blanchette:
Into the heart of darkness: large-scale clustering of human non-coding DNA.
40-48
Electronic Edition (link) BibTeX
- Marshall W. Bern, David Goldberg, W. Hayes McDonald, John R. Yates III:
Automatic Quality Assessment of Peptide Tandem Mass Spectra.
49-54
Electronic Edition (link) BibTeX
- Doron Betel, Ruth Isserlin-Weinberger, Christopher W. V. Hogue:
Analysis of domain correlations in yeast protein complexes.
55-62
Electronic Edition (link) BibTeX
- Emidio Capriotti, Piero Fariselli, Rita Casadio:
A neural-network-based method for predicting protein stability changes upon single point mutations.
63-68
Electronic Edition (link) BibTeX
- Robert Castelo, Roderic Guigó:
Splice site identification by idlBNs.
69-76
Electronic Edition (link) BibTeX
- Shann-Ching Chen, Ivet Bahar:
Mining frequent patterns in protein structures: a study of protease families.
77-85
Electronic Edition (link) BibTeX
- Sarah Cohen Boulakia, Séverine Lair, Nicolas Stransky, Stéphane Graziani, François Radvanyi, Emmanuel Barillot, Christine Froidevaux:
Selecting biomedical data sources according to user preferences.
86-93
Electronic Edition (link) BibTeX
- Lachlan James M. Coin, Richard Durbin:
Improved techniques for the identification of pseudogenes.
94-100
Electronic Edition (link) BibTeX
- Michiel J. L. de Hoon, Yuko Makita, Seiya Imoto, Kazuo Kobayashi, Naotake Ogasawara, Kenta Nakai, Satoru Miyano:
Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data.
101-108
Electronic Edition (link) BibTeX
- Christoph Dieterich, Sven Rahmann, Martin Vingron:
Functional inference from non-random distributions of conserved predicted transcription factor binding sites.
109-115
Electronic Edition (link) BibTeX
- Hernán Dopazo, Javier Santoyo, Joaquín Dopazo:
Phylogenomics and the number of characters required for obtaining an accurate phylogeny of eukaryote model species.
116-121
Electronic Edition (link) BibTeX
- Angela Enosh, Sarel J. Fleishman, Nir Ben-Tal, Dan Halperin:
Assigning transmembrane segments to helices in intermediate-resolution structures.
122-129
Electronic Edition (link) BibTeX
- Richard A. George, Ruth V. Spriggs, Janet M. Thornton, Bissan Al-Lazikani, Mark B. Swindells:
SCOPEC: a database of protein catalytic domains.
130-136
Electronic Edition (link) BibTeX
- Gideon Greenspan, Dan Geiger:
High density linkage disequilibrium mapping using models of haplotype block variation.
137-144
Electronic Edition (link) BibTeX
- Cigdem Gunduz, Bülent Yener, S. Humayun Gultekin:
The cell graphs of cancer.
145-151
Electronic Edition (link) BibTeX
- Naohiko Heida, Yoshikazu Hasegawa, Yoshiki Mochizuki, Katsura Hirosawa, Akihiko Konagaya, Tetsuro Toyoda:
TraitMap: an XML-based genetic-map database combining multigenic loci and biomolecular networks.
152-160
Electronic Edition (link) BibTeX
- Vladimir Jojic, Nebojsa Jojic, Christopher Meek, Dan Geiger, Adam C. Siepel, David Haussler, David Heckerman:
Efficient approximations for learning phylogenetic HMM models from data.
161-168
Electronic Edition (link) BibTeX
- Cliff Joslyn, Susan M. Mniszewski, Andy W. Fulmer, Gary Heaton:
The Gene Ontology Categorizer.
169-177
Electronic Edition (link) BibTeX
- Peter Kharchenko, Dennis Vitkup, George M. Church:
Filling gaps in a metabolic network using expression information.
178-185
Electronic Edition (link) BibTeX
- Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert:
Optimal robust non-unique probe selection using Integer Linear Programming.
186-193
Electronic Edition (link) BibTeX
- Dennis Kostka, Rainer Spang:
Finding disease specific alterations in the co-expression of genes.
194-199
Electronic Edition (link) BibTeX
- Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski:
An efficient algorithm for detecting frequent subgraphs in biological networks.
200-207
Electronic Edition (link) BibTeX
- Hongzhe Li, Jiang Gui:
Partial Cox regression analysis for high-dimensional microarray gene expression data.
208-215
Electronic Edition (link) BibTeX
- Gerton Lunter, Jotun Hein:
A nucleotide substitution model with nearest-neighbour interactions.
216-223
Electronic Edition (link) BibTeX
- Robert M. MacCallum:
Striped sheets and protein contact prediction.
224-231
Electronic Edition (link) BibTeX
- Manuel Middendorf, Anshul Kundaje, Chris Wiggins, Yoav Freund, Christina S. Leslie:
Predicting genetic regulatory response using classification.
232-240
Electronic Edition (link) BibTeX
- Sven Mika, Burkhard Rost:
Protein names precisely peeled off free text.
241-247
Electronic Edition (link) BibTeX
- Iftach Nachman, Aviv Regev, Nir Friedman:
Inferring quantitative models of regulatory networks from expression data.
248-256
Electronic Edition (link) BibTeX
- Stephen A. Racunas, N. H. Shah, I. Albert, Nina V. Fedoroff:
HyBrow: a prototype system for computer-aided hypothesis evaluation.
257-264
Electronic Edition (link) BibTeX
- Benjamin J. Raphael, Pavel A. Pevzner:
Reconstructing tumor amplisomes.
265-273
Electronic Edition (link) BibTeX
- David J. Reiss, Benno Schwikowski:
Predicting protein-peptide interactions via a network-based motif sampler.
274-282
Electronic Edition (link) BibTeX
- Alexander Schliep, Christine Steinhoff, Alexander Schönhuth:
Robust inference of groups in gene expression time-courses using mixtures of HMMs.
283-289
Electronic Edition (link) BibTeX
- Padmini Srinivasan, Bisharah Libbus:
Mining MEDLINE for implicit links between dietary substances and diseases.
290-296
Electronic Edition (link) BibTeX
- Kellathur N. Srinivasan, Guanglan Zhang, Asif M. Khan, J. Thomas August, Vladimir Brusic:
Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens.
297-302
Electronic Edition (link) BibTeX
- Robert D. Stevens, Hannah J. Tipney, Chris Wroe, Thomas M. Oinn, Martin Senger, Phillip W. Lord, Carole A. Goble, Andy Brass, M. Tassabehji:
Exploring Williams-Beuren syndrome using myGrid.
303-310
Electronic Edition (link) BibTeX
- Radek Szklarczyk, Jaap Heringa:
Tracking repeats using significance and transitivity.
311-317
Electronic Edition (link) BibTeX
- Phil Trinh, Aoife McLysaght, David Sankoff:
Genomic features in the breakpoint regions between syntenic blocks.
318-325
Electronic Edition (link) BibTeX
- Koji Tsuda, William Stafford Noble:
Learning kernels from biological networks by maximizing entropy.
326-333
Electronic Edition (link) BibTeX
- Zasha Weinberg, Walter L. Ruzzo:
Exploiting conserved structure for faster annotation of non-coding RNAs without loss of accuracy.
334-341
Electronic Edition (link) BibTeX
- Daniela Wieser, Ernst Kretschmann, Rolf Apweiler:
Filtering erroneous protein annotation.
342-347
Electronic Edition (link) BibTeX
- M. D. Woodhams, Michael D. Hendy:
Reconstructing phylogeny by Quadratically Approximated Maximum Likelihood.
348-354
Electronic Edition (link) BibTeX
- Weijia Xu, Willard J. Briggs, Joanna Padolina, Ruth E. Timme, Wenguo Liu, C. Randal Linder, Daniel P. Miranker:
Using MoBIoS' scalable genome join to find conserved primer pair candidates between two genomes.
355-362
Electronic Edition (link) BibTeX
- Yoshihiro Yamanishi, Jean-Philippe Vert, Minoru Kanehisa:
Protein network inference from multiple genomic data: a supervised approach.
363-370
Electronic Edition (link) BibTeX
- Changhui Yan, Drena Dobbs, Vasant Honavar:
A two-stage classifier for identification of protein-protein interface residues.
371-378
Electronic Edition (link) BibTeX
- Mehdi Yousfi Monod, Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc:
IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs.
379-385
Electronic Edition (link) BibTeX
- Mohammed Javeed Zaki, Vinay Nadimpally, Deb Bardhan, Chris Bystroff:
Predicting protein folding pathways.
386-393
Electronic Edition (link) BibTeX
Copyright © Fri May 16 16:31:31 2008
by Michael Ley (ley@uni-trier.de)
