SC 2001: Denver, CO, USA

• Aiichiro Nakano, Rajiv K. Kalia, Priya Vashishta, Timothy Campbell, Shuji Ogata, Fuyuki Shimojo, Subhash Saini:
  Scalable atomistic simulation algorithms for materials research. 1
  
• Valerio Pascucci, Randall J. Frank:
  Global static indexing for real-time exploration of very large regular grids. 2
  
• Kyung Dong Ryu, Jeffrey K. Hollingsworth, Peter J. Keleher:
  Efficient network and I/O throttling for fine-grain cycle stealing. 3
  
• Mark F. Adams:
  A distributed memory unstructured gauss-seidel algorithm for multigrid smoothers. 4
  
• Kenneth A. Perrine, Donald R. Jones:
  Parallel graphics and interactivity with the scaleable graphics engine. 5
  
• Andrew M. Wissink, Richard D. Hornung, Scott R. Kohn, Steve S. Smith, Noah Elliott:
  Large scale parallel structured AMR calculations using the SAMRAI framework. 6
  
• Alan E. Charlesworth:
  The sun fireplane system interconnect. 7
  
• L. A. Smith, J. Mark Bull, J. Obdrzálek:
  A parallel java grande benchmark suite. 8
  
• Phu V. Luong, Clay P. Breshears, Le N. Ly:
  Coastal ocean modeling of the U.S. west coast with multiblock grid and dual-level parallelism. 9
  
• David W. Miller, Jinhua Guo, Eileen Kraemer, Yin Xiong:
  On-the-fly calculation and verification of consistent steering transactions. 10
  
• Robert B. Ross, Daniel Nurmi, Albert Cheng, Michael Zingale:
  A case study in application I/O on Linux clusters. 11
  
• Shava Smallen, Henri Casanova, Francine Berman:
  Applying scheduling and tuning to on-line parallel tomography. 12
  
• Greg Bryan, Tom Abel, Michael L. Norman:
  Achieving extreme resolution in numerical cosmology using adaptive mesh refinement: resolving primordial star formation. 13
  
• Antoine Petitet, L. Susan Blackford, Jack Dongarra, Brett Ellis, Graham E. Fagg, Kenneth Roche, Sathish S. Vadhiyar:
  Numerical libraries and the grid: the GrADS experiments with ScaLAPACK. 14
  
• Osamu Tatebe, Umpei Nagashima, Satoshi Sekiguchi, Hisayoshi Kitabayashi, Yoshiyuki Hayashida:
  Design and implementation of FMPL, a fast message-passing library for remote memory operations. 15
  
• Dimitrios S. Nikolopoulos, Constantine D. Polychronopoulos, Eduard Ayguadé:
  Scaling irregular parallel codes with minimal programming effort. 16
  
• Jean-Pierre Prost, Richard Treumann, Richard Hedges, Bin Jia, Alice E. Koniges:
  MPI-IO/GPFS, an optimized implementation of MPI-IO on top of GPFS. 17
  
• Richard D. Loft, Stephen J. Thomas, John M. Dennis:
  Terascale spectral element dynamical core for atmospheric general circulation models. 18
  
• Yu Zhuang, Xian-He Sun:
  Stable, globally non-iterative, non-overlapping domain decomposition parallel solvers for parabolic problems. 19
  
• Craig A. Stewart, David Hart, Donald K. Berry, Gary J. Olsen, Eric A. Wernert, William Fischer:
  Parallel implementation and performance of fastDNAml: a program for maximum likelihood phylogenetic inference. 20
  
• Patrick C. Moore, Wilbur R. Johnson, Richard J. Detry:
  Adapting globus and kerberos for a secure ASCI grid. 21
  
• Bryan Singer, Manuela M. Veloso:
  Stochastic search for signal processing algorithm optimization. 22
  
• Chao-Yang Gau, Mark A. Stadtherr:
  Parallel interval-Newton using message passing: dynamic load balancing strategies. 23
  
• Toyotaro Suzumura, Satoshi Matsuoka, Hidemoto Nakada:
  A Jini-based computing portal system. 24
  
• David Abramson, Andrew Lewis, Tom Peachey, Clive Fletcher:
  An automatic design optimization tool and its application to computational fluid dynamics. 25
  
• Tetsu Narumi, Atsushi Kawai, Takahiro Koishi:
  An 8.61 Tflop/s molecular dynamics simulation for NaCl with a special-purpose computer: MDM. 26
  
• Thomas Rauber, Robert Reilein, Gudula Rünger:
  ORT: a communication library for orthogonal processor groups. 27
  
• Ümit V. Çatalyürek, Cevdet Aykanat:
  A hypergraph-partitioning approach for coarse-grain decomposition. 28
  
• Alessandro Marongiu, Paolo Palazzari, Vittorio Rosato:
  Parallel dedicated hardware devices for heterogeneous computations. 29
  
• Nathalie Furmento, Anthony Mayer, Stephen McGough, Steven Newhouse, Tony Field, John Darlington:
  Optimisation of component-based applications within a grid environment. 30
  
• Valentin Puente, José A. Gregorio, Ramón Beivide, Fernando Vallejo, Andres Ibañez:
  A new routing mechanism for networks with irregular topology. 31
  
• David Caliga, David Peter Barker:
  Delivering acceleration: the potential for increased HPC application performance using reconfigurable logic. 32
  
• Kenneth M. Wilson, Bob B. Aglietti:
  Dynamic page placement to improve locality in CC-NUMA multiprocessors for TPC-C. 33
  
• Hong Linh Truong, Thomas Fahringer, Georg Madsen, Allen D. Malony, Hans Moritsch, Sameer Shende:
  On using SCALEA for performance analysis of distributed and parallel programs. 34
  
• Thomas Fahringer, Clovis Seragiotto Jr.:
  Modeling and detecting performance problems for distributed and parallel programs with JavaPSL. 35
  
• Zhiling Lan, Valerie E. Taylor, Greg Bryan:
  Dynamic load balancing of SAMR applications on distributed systems. 36
  
• Darren J. Kerbyson, Henry J. Alme, Adolfy Hoisie, Fabrizio Petrini, Harvey J. Wasserman, M. Gittings:
  Predictive performance and scalability modeling of a large-scale application. 37
  
• Eladio Gutiérrez, Oscar G. Plata, Emilio L. Zapata:
  Improving parallel irregular reductions using partial array expansion. 38
  
• Florin Dobrian, Alex Pothen:
  The design of I/O-efficient sparse direct solvers. 39
  
• Ron Brightwell, Lee Ann Fisk:
  Scalable parallel application launch on Cplant. 40
  
• Bruce Greer, John Harrison, Greg Henry, Wei Li, Peter Tang:
  Scientific computing on the Itanium processor. 41
  
• Dimitri Komatitsch, Jeroen Tromp:
  Modeling of seismic wave propagation at the scale of the Earth on a large Beowulf. 42
  
• Guohua Jin, John M. Mellor-Crummey, Robert J. Fowler:
  Increasing temporal locality with skewing and recursive blocking. 43
  
• A. Canning, B. Ujfalussy, Thomas C. Schulthess, X.-G. Zhang, William A. Shelton, D. M. C. Nicholson, G. M. Stocks, Yang Wang, T. Dirks:
  Multi-teraflops spin dynamics studies of the magnetic structure of FeMn/Co interfaces. 44
  
• Irene Moulitsas, George Karypis:
  Multilevel algorithms for generating coarse grids for multigrid methods. 45
  
• William E. Allcock, Ian T. Foster, Veronika Nefedova, Ann L. Chervenak, Ewa Deelman, Carl Kesselman, Jason Lee, Alex Sim, Arie Shoshani, Bob Drach, Dean Williams:
  High-performance remote access to climate simulation data: a challenge problem for data grid technologies. 46
  
• Mark Baertschy, Xiaoye S. Li:
  Solution of a three-body problem in quantum mechanics using sparse linear algebra on parallel computers. 47
  
• Kevin Roe, Duane Stevens, Carol McCord:
  High resolution weather modeling for improved fire management. 48
  
• Sriram Krishnan, Randall Bramley, Dennis Gannon, Madhusudhan Govindaraju, Rahul Indurkar, Aleksander Slominski, Benjamin Temko, Jay Alameda, Richard C. Alkire, Timothy O. Drews, Eric Webb:
  The XCAT science portal. 49
  
• Chris H. Q. Ding, Yun He:
  A ghost cell expansion method for reducing communications in solving PDE problems. 50
  
• Shigeru Muraki, Masato Ogata, Kwan-Liu Ma, Kenji Koshizuka, Kagenori Kajihara, Xuezhen Liu, Yasutada Nagano, Kazuro Shimokawa:
  Next-generation visual supercomputing using PC clusters with volume graphics hardware devices. 51
  
• Gabrielle Allen, Thomas Dramlitsch, Ian T. Foster, Nicholas T. Karonis, Matei Ripeanu, Edward Seidel, Brian R. Toonen:
  Supporting efficient execution in heterogeneous distributed computing environments with cactus and globus. 52
  
• Henrique Andrade, Tahsin M. Kurç, Alan Sussman, Joel H. Saltz:
  Efficient execution of multiple query workloads in data analysis applications. 53
  
• Keith D. Underwood, Ron R. Sass, Walter B. Ligon III:
  Cost effectiveness of an adaptable computing cluster. 54
  
• E. Scott Larsen, David K. McAllister:
  Fast matrix multiplies using graphics hardware. 55
  
• Zoran Radovic, Erik Hagersten:
  Removing the overhead from software-based shared memory. 56
  
• Piyush Shivam, Pete Wyckoff, Dhabaleswar K. Panda:
  EMP: zero-copy OS-bypass NIC-driven gigabit ethernet message passing. 57
  
• Douglas Thain, John Bent, Andrea C. Arpaci-Dusseau, Remzi H. Arpaci-Dusseau, Miron Livny:
  Gathering at the well: creating communities for grid I/O. 58
  
• Brian S. White, Michael Walker, Marty Humphrey, Andrew S. Grimshaw:
  LegionFS: a secure and scalable file system supporting cross-domain high-performance applications. 59
  
• Chung-Hung Lai, Tien-Fu Chen:
  Compressing inverted files in scalable information systems by binary decision diagram encoding . 60