11. WABI 2011: Saarbrücken, Germany
Teresa M. Przytycka, Marie-France Sagot (Eds.): Algorithms in Bioinformatics - 11th International Workshop, WABI 2011, Saarbrücken, Germany, September 5-7, 2011. Proceedings. Springer 2011 Lecture Notes in Computer Science ISBN 978-3-642-23037-0- Brona Brejová, Michal Burger, Tomás Vinar: Automated Segmentation of DNA Sequences with Complex Evolutionary Histories. 1-13
- Stefan Canzar, Mohammed El-Kebir: A Mathematical Programming Approach to Marker-Assisted Gene Pyramiding. 26-38
- Rayan Chikhi, Dominique Lavenier: Localized Genome Assembly from Reads to Scaffolds: Practical Traversal of the Paired String Graph. 39-48
- Daniel Doerr, Ilan Gronau, Shlomo Moran, Irad Yavneh: Stochastic Errors vs. Modeling Errors in Distance Based Phylogenetic Reconstructions - (Extended Abstract). 49-60
- Elad Donsky, Haim J. Wolfson: PepCrawler: A Fast RRT-Like Algorithm for High-Resolution Refinement and Binding-Affinity Estimation of Peptide Inhibitors - (Abstract). 73-75
- Mohamed Elati, Rim Fekih, Rémy Nicolle, Ivan Junier, Joan Hérisson, François Képès: Boosting Binding Sites Prediction Using Gene's Positions. 92-103
- Rob Gysel, Fumei Lam, Dan Gusfield: Constructing Perfect Phylogenies and Proper Triangulations for Three-State Characters. 104-115
- Jonathan Qiang Jiang: Learning Protein Functions from Bi-relational Graph of Proteins and Function Annotations. 128-138
- Hans-Michael Kaltenbach, Simona Constantinescu, Justin Feigelman, Jörg Stelling: Graph-Based Decomposition of Biochemical Reaction Networks into Monotone Subsystems. 139-150
- Kouichi Kimura, Asako Koike, Kenta Nakai: Seed-Set Construction by Equi-entropy Partitioning for Efficient and Sensitive Short-Read Mapping. 151-162
- Jakub Kovác, Brona Brejová, Tomás Vinar: A Practical Algorithm for Ancestral Rearrangement Reconstruction. 163-174
- Yu Lin, Vaibhav Rajan, Bernard M. E. Moret: Bootstrapping Phylogenies Inferred from Rearrangement Data. 175-187
- Noël Malod-Dognin, Mathilde Le Boudic-Jamin, Pritish Kamath, Rumen Andonov: Using Dominances for Solving the Protein Family Identification Problem. 201-212
- Serghei Mangul, Irina Astrovskaya, Marius Nicolae, Bassam Tork, Ion I. Mandoiu, Alexander Zelikovsky: Maximum Likelihood Estimation of Incomplete Genomic Spectrum from HTS Data. 213-224
- Vincent Noel, Sergei Vakulenko, Ovidiu Radulescu: Algorithm for Identification of Piecewise Smooth Hybrid Systems: Application to Eukaryotic Cell Cycle Regulation. 225-236
- Robert Patro, Emre Sefer, Justin Malin, Guillaume Marçais, Saket Navlakha, Carl Kingsford: Parsimonious Reconstruction of Network Evolution. 237-249
- Yann Ponty, Cédric Saule: A Combinatorial Framework for Designing (Pseudoknotted) RNA Algorithms. 250-269
- Jouni Sirén, Niko Välimäki, Veli Mäkinen: Indexing Finite Language Representation of Population Genotypes. 270-281
- Kristian Stevens, Bonnie Kirkpatrick: Efficiently Solvable Perfect Phylogeny Problems on Binary and k-State Data with Missing Values. 282-297
- Olga Tanaseichuk, James Borneman, Tao Jiang: Separating Metagenomic Short Reads into Genomes via Clustering - (Extended Abstract). 298-313
- Fabio Vandin, Eli Upfal, Benjamin J. Raphael: Finding Driver Pathways in Cancer: Models and Algorithms. 314-325
- Joseph Andrew Whitney, Judice L. Y. Koh, Michael Costanzo, Grant Brown, Charles Boone, Michael Brudno: Clustering with Overlap for Genetic Interaction Networks via Local Search Optimization. 326-338
- Hang Xiao, Melvin Zhang, Axel Mosig, Hon Wai Leong: Dynamic Programming Algorithms for Efficiently Computing Cosegmentations between Biological Images. 339-350
- Chunfang Zheng, Krister M. Swenson, Eric Lyons, David Sankoff: OMG! Orthologs in Multiple Genomes - Competing Graph-Theoretical Formulations. 364-375
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last updated on 2013-06-18T211851 by the dblp team