 | 2009 |
|---|
| 8 |       | Arvind Ramanathan,
Pratul K. Agarwal,
Maria Kurnikova,
Christopher James Langmead:
An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations.
RECOMB 2009: 138-154 |
| 2008 |
|---|
| 7 | | Sadaf R. Alam,
Pratul K. Agarwal,
Scott S. Hampton,
Hong Ong:
Experimental Evaluation of Molecular Dynamics Simulations on Multi-core Systems.
HiPC 2008: 131-141 |
| 6 | | Sadaf R. Alam,
Pratul K. Agarwal,
Scott S. Hampton,
Hong Ong,
Jeffrey S. Vetter:
Impact of multicores on large-scale molecular dynamics simulations.
IPDPS 2008: 1-7 |
| 5 | | Sadaf R. Alam,
Pratul K. Agarwal,
Jeffrey S. Vetter:
Performance characteristics of biomolecular simulations on high-end systems with multi-core processors.
Parallel Computing 34(11): 640-651 (2008) |
| 2007 |
|---|
| 4 | | Sadaf R. Alam,
Pratul K. Agarwal,
Jeffery A. Kuehn:
Performance Evaluation of a Scalable Molecular Dynamics Simulation Framework on a Massively-Parallel System.
BIBE 2007: 1459-1466 |
| 3 | | Sadaf R. Alam,
Pratul K. Agarwal:
On the Path to Enable Multi-scale Biomolecular Simulations on PetaFLOPS Supercomputer with Multi-core Processors.
IPDPS 2007: 1-8 |
| 2 | | Sadaf R. Alam,
Pratul K. Agarwal,
Melissa C. Smith,
Jeffrey S. Vetter,
David Caliga:
Using FPGA Devices to Accelerate Biomolecular Simulations.
IEEE Computer 40(3): 66-73 (2007) |
| 2006 |
|---|
| 1 | | Sadaf R. Alam,
Jeffrey S. Vetter,
Pratul K. Agarwal,
Al Geist:
Performance characterization of molecular dynamics techniques for biomolecular simulations.
PPOPP 2006: 59-68 |
