Richa Agarwala

	2009
22		William Klimke, Richa Agarwala, Azat Badretdin, Slava Chetvernin, Stacy Ciufo, Boris Fedorov, Boris Kiryutin, Kathleen O'Neill, Wolfgang Resch, Sergei Resenchuk, Susan Schafer, Igor Tolstoy, Tatiana A. Tatusova: The National Center for Biotechnology Information's Protein Clusters Database. Nucleic Acids Research 37(Database-Issue): 216-223 (2009)
	2008
21		Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas L. Madden, Richa Agarwala, Alejandro A. Schäffer: Database indexing for production MegaBLAST searches. Bioinformatics 24(16): 1757-1764 (2008)
20		Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas L. Madden, Richa Agarwala, Alejandro A. Schäffer: Database indexing for production MegaBLAST searches. Bioinformatics 24(24): 2942 (2008)
	2007
19		Sergey A. Shiryev, Jason S. Papadopoulos, Alejandro A. Schäffer, Richa Agarwala: Improved BLAST searches using longer words for protein seeding. Bioinformatics 23(21): 2949-2951 (2007)
18		Jason S. Papadopoulos, Richa Agarwala: COBALT: constraint-based alignment tool for multiple protein sequences. Bioinformatics 23(9): 1073-1079 (2007)
17		Alejandro A. Schäffer, Edward Stallknecht Rice, William Cook, Richa Agarwala: rh_tsp_map 3.0: end-to-end radiation hybrid mapping with improved speed and quality control. Bioinformatics 23(9): 1156-1158 (2007)
	2006
16		Aleksandr Morgulis, E. Michael Gertz, Alejandro A. Schäffer, Richa Agarwala: WindowMasker: window-based masker for sequenced genomes. Bioinformatics 22(2): 134-141 (2006)
15		Aleksandr Morgulis, E. Michael Gertz, Alejandro A. Schäffer, Richa Agarwala: A Fast and Symmetric DUST Implementation to Mask Low-Complexity DNA Sequences. Journal of Computational Biology 13(5): 1028-1040 (2006)
	2000
14		Richa Agarwala, Leslie G. Biesecker, Alejandro A. Schäffer: Inverse inbreeding coefficient problems with an application to linkage analysis of recessive diseases in inbred populations. Discrete Applied Mathematics 104(1-3): 3-44 (2000)
	1999
13		Richa Agarwala, Leslie G. Biesecker, Alejandro A. Schäffer: Inverse Inbreeding Coefficient Problems with an Application to Linkage Analysis of Recessive Diseases in Inbred Populations. SODA 1999: 840-841
12		Richa Agarwala, Vineet Bafna, Martin Farach, Mike Paterson, Mikkel Thorup: On the Approximability of Numerical Taxonomy (Fitting Distances by Tree Metrics). SIAM J. Comput. 28(3): 1073-1085 (1999)
	1997
11		Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, S. Muthukrishnan, Steven Skiena: Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model. RECOMB 1997: 1-2
10		Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, Steven Skiena: Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. SODA 1997: 390-399
9		Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Sridhar Hannenhalli, Martin Farach, S. Muthukrishnan, Steven Skiena: Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. Journal of Computational Biology 4(3): 275-296 (1997)
	1996
8		Richa Agarwala, Vineet Bafna, Martin Farach, Babu O. Narayanan, Mike Paterson, Mikkel Thorup: On the Approximability of Numerical Taxonomy (Fitting Distances by Tree Metrics). SODA 1996: 365-372
7		Richa Agarwala, David Fernández-Baca: Simple Algorithms for Perfect Phylogeny and Triangulating Colored Graphs. Int. J. Found. Comput. Sci. 7(1): 11-22 (1996)
6		Richa Agarwala, David Fernández-Baca: Weighted Multidimensional Search and Its Application to Convex Optimization. SIAM J. Comput. 25(1): 83-99 (1996)
	1995
5		Richa Agarwala, David Fernández-Baca: Weighted Search in the Plane. Inf. Process. Lett. 54(2): 97-100 (1995)
4		Richa Agarwala, David Fernández-Baca, Giora Slutzki: Fast Algorithms for Inferring Evolutionary Trees. Journal of Computational Biology 2(3): 397-407 (1995)
	1994
3		Richa Agarwala, David Fernández-Baca: A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when the Number of Character States is Fixed. SIAM J. Comput. 23(6): 1216-1224 (1994)
	1993
2		Richa Agarwala, David Fernández-Baca: A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when the Number of Character States is Fixed FOCS 1993: 140-147
	1992
1		Richa Agarwala, David Fernández-Baca: Solving the Lagrangian Dual when the Number of Constraints is Fixed. FSTTCS 1992: 164-175

Coauthor Index

1	Azat Badretdin	[22]
2	Vineet Bafna	[8] [12]
3	Serafim Batzoglou	[9] [10] [11]
4	Leslie G. Biesecker	[13] [14]
5	Slava Chetvernin	[22]
6	Stacy Ciufo	[22]
7	William Cook	[17]
8	George Coulouris	[20] [21]
9	Vlado Dancík	[9] [10] [11]
10	Scott E. Decatur	[9] [10] [11]
11	Martin Farach-Colton (Martin Farach)	[8] [9] [10] [11] [12]
12	Boris Fedorov	[22]
13	David Fernández-Baca	[1] [2] [3] [4] [5] [6] [7]
14	E. Michael Gertz	[15] [16]
15	Sridhar Hannenhalli	[9] [10] [11]
16	Boris Kiryutin	[22]
17	William Klimke	[22]
18	Thomas L. Madden	[20] [21]
19	Aleksandr Morgulis	[15] [16] [20] [21]
20	S. Muthukrishnan (S. Muthu Muthukrishnan)	[9] [11]
21	Babu O. Narayanan	[8]
22	Kathleen O'Neill	[22]
23	Jason S. Papadopoulos	[18] [19]
24	Mike Paterson	[8] [12]
25	Yan Raytselis	[20] [21]
26	Wolfgang Resch	[22]
27	Sergei Resenchuk	[22]
28	Edward Stallknecht Rice	[17]
29	Susan Schafer	[22]
30	Alejandro A. Schäffer	[13] [14] [15] [16] [17] [19] [20] [21]
31	Sergey A. Shiryev	[19]
32	Steven Skiena	[9] [10] [11]
33	Giora Slutzki	[4]
34	Tatiana A. Tatusova	[22]
35	Mikkel Thorup	[8] [12]
36	Igor Tolstoy	[22]

Colors in the list of coauthors