| 2009 | ||
|---|---|---|
| 19 | Mathieu Clément-Ziza, Christophe Malabat, Christian Weber, Ivan Moszer, Tero Aittokallio, Catherine Letondal, Sandrine Rousseau: Genoscape: a Cytoscape plug-in to automate the retrieval and integration of gene expression data and molecular networks. Bioinformatics 25(19): 2617-2618 (2009) | |
| 2008 | ||
| 18 | Arho Virkki, Olli Polo, Tarja Saaresranta, Anne Laapotti-Salo, Mats Gyllenberg, Tero Aittokallio: Overnight features of transcutaneous carbon dioxide measurement as predictors of metabolic status. Artificial Intelligence in Medicine 42(1): 55-65 (2008) | |
| 17 | Johannes Tuikkala, Laura Elo, Olli Nevalainen, Tero Aittokallio: Missing value imputation improves clustering and interpretation of gene expression microarray data. BMC Bioinformatics 9: (2008) | |
| 16 | Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa Uusipaikka: Model-based prediction of sequence alignment quality. Bioinformatics 24(19): 2165-2171 (2008) | |
| 15 | Laura Elo, Sanna Filen, Riitta Lahesmaa, Tero Aittokallio: Reproducibility-Optimized Test Statistic for Ranking Genes in Microarray Studies. IEEE/ACM Trans. Comput. Biology Bioinform. 5(3): 423-431 (2008) | |
| 2007 | ||
| 14 | Laura Elo, Henna Järvenpää, Matej Oresic, Riitta Lahesmaa, Tero Aittokallio: Systematic construction of gene coexpression networks with applications to human T helper cell differentiation process. Bioinformatics 23(16): 2096-2103 (2007) | |
| 13 | Olivier Garcia, Cosmin Saveanu, Melissa S. Cline, Micheline Fromont-Racine, Alain Jacquier, Benno Schwikowski, Tero Aittokallio: GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring. Bioinformatics 23(3): 394-396 (2007) | |
| 12 | Tero Aittokallio, Jani S. Malminen, Tapio Pahikkala, Olli Polo, Olli Nevalainen: Inspiratory flow shape clustering: An automated method to monitor upper airway performance during sleep. Computer Methods and Programs in Biomedicine 85(1): 8-18 (2007) | |
| 2006 | ||
| 11 | Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa Uusipaikka: A statistical score for assessing the quality of multiple sequence alignments. BMC Bioinformatics 7: 484 (2006) | |
| 10 | Jussi Salmi, Robert Moulder, Jan-Jonas Filén, Olli Nevalainen, Tuula A. Nyman, Riitta Lahesmaa, Tero Aittokallio: Quality classification of tandem mass spectrometry data. Bioinformatics 22(4): 400-406 (2006) | |
| 9 | Johannes Tuikkala, Laura Elo, Olli Nevalainen, Tero Aittokallio: Improving missing value estimation in microarray data with gene ontology. Bioinformatics 22(5): 566-572 (2006) | |
| 8 | Tero Aittokallio, Benno Schwikowski: Graph-based methods for analysing networks in cell biology. Briefings in Bioinformatics 7(3): 243-255 (2006) | |
| 7 | Laura Elo, Riitta Lahesmaa, Tero Aittokallio: Inference of Gene Coexpression Networks by Integrative Analysis across Microarray Experiments. J. Integrative Bioinformatics 3(2): (2006) | |
| 2005 | ||
| 6 | Marius C. Codrea, Tero Aittokallio, Mika Keränen, Esa Tyystjärvi, Olli Nevalainen: On the Robustness of Fluorescence Fingerprinting of Plants. Artificial Intelligence and Applications 2005: 400-405 | |
| 2003 | ||
| 5 | Marius C. Codrea, Tero Aittokallio, Mika Keränen, Esa Tyystjärvi, Olli Nevalainen: Genetic Feature Learning Algorithm for Fluorescence Fingerprinting of Plants. Artificial Evolution 2003: 371-383 | |
| 4 | Virpi Ahola, Tero Aittokallio, Esa Uusipaikka, Mauno Vihinen: Efficient estimation of emission probabilities in profile hidden Markov models. Bioinformatics 19(18): 2359-2368 (2003) | |
| 3 | Tero Aittokallio, Markus Kurki, Olli Nevalainen, Tuomas Nikula, Anne West, Riitta Lahesmaa: Computational Strategies for Analyzing Data in Gene Expression Microarray Experiments. J. Bioinformatics and Computational Biology 1(3): 541-586 (2003) | |
| 2 | Marius C. Codrea, Tero Aittokallio, Mika Keränen, Esa Tyystjärvi, Olli Nevalainen: Feature learning with a genetic algorithm for fluorescence fingerprinting of plant species. Pattern Recognition Letters 24(15): 2663-2673 (2003) | |
| 2000 | ||
| 1 | Tero Aittokallio, Mats Gyllenberg, J. Järvi, Olli Nevalainen, Olli Polo: Detection of high-frequency respiratory movements during sleep. Computer Methods and Programs in Biomedicine 61(3): 171-185 (2000) | |