 | 2009 |
|---|
| 38 |       | Sebastian Böcker,
Birte Kehr,
Florian Rasche:
Determination of Glycan Structure from Tandem Mass Spectra.
COCOON 2009: 258-267 |
| 37 | | Sebastian Böcker,
Anton Pervukhin:
Inferring Peptide Composition from Molecular Formulas.
COCOON 2009: 277-286 |
| 36 | | Sebastian Böcker,
Quang Bao Anh Bui,
Patrick Seeber,
Anke Truß:
Computing Bond Types in Molecule Graphs.
COCOON 2009: 297-306 |
| 35 | | Sebastian Böcker,
Falk Hüffner,
Anke Truß,
Magnus Wahlström:
A Faster Fixed-Parameter Approach to Drawing Binary Tanglegrams.
IWPEC 2009: 38-49 |
| 34 | | Sebastian Böcker,
Florian Rasche,
Tamara Steijger:
Annotating Fragmentation Patterns.
WABI 2009: 13-24 |
| 33 | | Sebastian Böcker,
Sebastian Briesemeister,
Gunnar W. Klau:
On optimal comparability editing with applications to molecular diagnostics.
BMC Bioinformatics 10(S-1): (2009) |
| 32 | | Sebastian Böcker,
Matthias C. Letzel,
Zsuzsanna Lipták,
Anton Pervukhin:
SIRIUS: decomposing isotope patterns for metabolite identification.
Bioinformatics 25(2): 218-224 (2009) |
| 31 | | Sebastian Böcker,
Sebastian Briesemeister,
Quang Bao Anh Bui,
Anke Truß:
Going weighted: Parameterized algorithms for cluster editing.
Theor. Comput. Sci. 410(52): 5467-5480 (2009) |
| 2008 |
|---|
| 30 | | Sebastian Böcker,
Sebastian Briesemeister,
Quang Bao Anh Bui,
Anke Truß:
A Fixed-Parameter Approach for Weighted Cluster Editing.
APBC 2008: 211-220 |
| 29 | | Sebastian Böcker,
Sebastian Briesemeister,
Quang Bao Anh Bui,
Anke Truß:
Going Weighted: Parameterized Algorithms for Cluster Editing.
COCOA 2008: 1-12 |
| 28 | | Sebastian Böcker,
Florian Rasche:
Towards de novo identification of metabolites by analyzing tandem mass spectra.
ECCB 2008: 49-55 |
| 27 | | Alexandra Scherbart,
Wiebke Timm,
Sebastian Böcker,
Tim W. Nattkemper:
Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting.
ICONIP (1) 2008: 513-520 |
| 26 | | Sebastian Böcker,
Quang Bao Anh Bui,
Anke Truß:
An Improved Fixed-Parameter Algorithm for Minimum-Flip Consensus Trees.
IWPEC 2008: 43-54 |
| 25 | | Sebastian Böcker,
Katharina Jahn,
Julia Mixtacki,
Jens Stoye:
Computation of Median Gene Clusters.
RECOMB 2008: 331-345 |
| 24 | | Sebastian Böcker,
Sebastian Briesemeister,
Gunnar W. Klau:
Exact Algorithms for Cluster Editing: Evaluation and Experiments.
WEA 2008: 289-302 |
| 23 | | Wiebke Timm,
Alexandra Scherbart,
Sebastian Böcker,
Oliver Kohlbacher,
Tim W. Nattkemper:
Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics.
BMC Bioinformatics 9: (2008) |
| 22 | | Thasso Griebel,
Malte Brinkmeyer,
Sebastian Böcker:
EPoS: a modular software framework for phylogenetic analysis.
Bioinformatics 24(20): 2399-2400 (2008) |
| 21 | | Sebastian Böcker,
Zsuzsanna Lipták,
Marcel Martin,
Anton Pervukhin,
Henner Sudek:
DECOMP - from interpreting Mass Spectrometry peaks to solving the Money Changing Problem.
Bioinformatics 24(4): 591-593 (2008) |
| 20 | | Sebastian Böcker,
Veli Mäkinen:
Combinatorial Approaches for Mass Spectra Recalibration.
IEEE/ACM Trans. Comput. Biology Bioinform. 5(1): 91-100 (2008) |
| 2007 |
|---|
| 19 | | Alexandra Scherbart,
Wiebke Timm,
Sebastian Böcker,
Tim W. Nattkemper:
Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping.
ICANN (2) 2007: 90-99 |
| 18 | | Sebastian Böcker,
Zsuzsanna Lipták:
A Fast and Simple Algorithm for the Money Changing Problem.
Algorithmica 48(4): 413-432 (2007) |
| 17 | | Hans-Michael Kaltenbach,
Andreas Wilke,
Sebastian Böcker:
SAMPI: Protein Identification with Mass Spectra Alignments.
BMC Bioinformatics 8: (2007) |
| 16 | | Sebastian Böcker:
Simulating multiplexed SNP discovery rates using base-specific cleavage and mass spectrometry.
Bioinformatics 23(2): 5-12 (2007) |
| 15 | | Sebastian Böcker,
Hans-Michael Kaltenbach:
Mass spectra alignments and their significance.
J. Discrete Algorithms 5(4): 714-728 (2007) |
| 2006 |
|---|
| 14 | | Hans-Michael Kaltenbach,
Sebastian Böcker,
Sven Rahmann:
Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting.
Systems Biology and Computational Proteomics 2006: 29-41 |
| 13 | | Sebastian Böcker,
Matthias C. Letzel,
Zsuzsanna Lipták,
Anton Pervukhin:
Decomposing Metabolomic Isotope Patterns.
WABI 2006: 12-23 |
| 12 | | Sebastian Böcker:
Sequencing from Compomers: The Puzzle.
Theory Comput. Syst. 39(3): 455-471 (2006) |
| 2005 |
|---|
| 11 | | Sebastian Böcker,
Zsuzsanna Lipták:
The Money Changing Problem Revisited: Computing the Frobenius Number in Time O(k a1).
COCOON 2005: 965-974 |
| 10 | | Sebastian Böcker,
Hans-Michael Kaltenbach:
Mass Spectra Alignments and Their Significance.
CPM 2005: 429-441 |
| 9 | | Sebastian Böcker,
Veli Mäkinen:
Combinatorial Approaches for Mass Spectra Recalibration.
Computational Proteomics 2005 |
| 8 | | Sebastian Böcker,
Veli Mäkinen:
Maximum line-pair stabbing problem and its variations.
EuroCG 2005: 183-186 |
| 7 | | Sebastian Böcker,
Zsuzsanna Lipták:
Efficient mass decomposition.
SAC 2005: 151-157 |
| 2004 |
|---|
| 6 |  | Sebastian Böcker:
Weighted Sequencing from Compomers: DNA de-novo sequencing from mass spectrometry data in the presence of false negative constraints.
German Conference on Bioinformatics 2004: 13-24 |
| 5 | | Sebastian Böcker:
Sequencing from Compomers: Using Mass Spectrometry for DNA de novo Sequencing of 200+ nt.
Journal of Computational Biology 11(6): 1110-1134 (2004) |
| 2003 |
|---|
| 4 | | Sebastian Böcker:
SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry.
ISMB (Supplement of Bioinformatics) 2003: 44-53 |
| 3 | | Sebastian Böcker:
Sequencing from Compomers: Using Mass Spectrometry for DNA De-Novo Sequencing of 200+ nt.
WABI 2003: 476-497 |
| 2002 |
|---|
| 2 | | Sebastian Böcker:
Exponentially many supertrees.
Appl. Math. Lett. 15(7): 861-865 (2002) |
| 2000 |
|---|
| 1 | | Sebastian Böcker,
David Bryant,
Andreas W. M. Dress,
Mike A. Steel:
Algorithmic Aspects of Tree Amalgamation.
J. Algorithms 37(2): 522-537 (2000) |
