Alex Bateman

	2009
49		Alex Bateman, Matt Wood: Cloud computing. Bioinformatics 25(12): 1475 (2009)
48		Alex Bateman, Robert D. Finn, Peter J. Sims, Therese Wiedmer, Andreas Biegert, Johannes Söding: Phospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factors. Bioinformatics 25(2): 159-162 (2009)
47		Alex Bateman, John Quackenbush: Editorial. Bioinformatics 25(4): 429 (2009)
46		Paul P. Gardner, Jennifer Daub, John G. Tate, Eric P. Nawrocki, Diana L. Kolbe, Stinus Lindgreen, Adam C. Wilkinson, Robert D. Finn, Sam Griffiths-Jones, Sean R. Eddy, Alex Bateman: Rfam: updates to the RNA families database. Nucleic Acids Research 37(Database-Issue): 136-140 (2009)
45		Sarah Hunter, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Peer Bork, Ujjwal Das, Louise Daugherty, Lauranne Duquenne, Robert D. Finn, Julian Gough, Daniel H. Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Aurélie Laugraud, Ivica Letunic, David Lonsdale, Rodrigo Lopez, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Jaina Mistry, Alex Mitchell, Nicola J. Mulder, Darren A. Natale, Christine A. Orengo, Antony F. Quinn, Jeremy D. Selengut, Christian J. A. Sigrist, Manjula Thimma, Paul D. Thomas, Franck Valentin, Derek Wilson, Cathy H. Wu, Corin Yeats: InterPro: the integrative protein signature database. Nucleic Acids Research 37(Database-Issue): 211-215 (2009)
	2008
44		Jonathan D. Wren, Alex Bateman: Databases, data tombs and dust in the wind. Bioinformatics 24(19): 2127-2128 (2008)
43		Stephen John Sammut, Robert D. Finn, Alex Bateman: Pfam 10 years on: 10 000 families and still growing. Briefings in Bioinformatics 9(3): 210-219 (2008)
42		Alex Bateman: Editorial. Nucleic Acids Research 36(Database-Issue): 1 (2008)
41		Robert D. Finn, John G. Tate, Jaina Mistry, Penny C. Coggill, Stephen John Sammut, Hans-Rudolf Hotz, Goran Ceric, Kristoffer Forslund, Sean R. Eddy, Erik L. L. Sonnhammer, Alex Bateman: The Pfam protein families database. Nucleic Acids Research 36(Database-Issue): 281-288 (2008)
	2007
40		Jaina Mistry, Alex Bateman, Robert D. Finn: Predicting active site residue annotations in the Pfam database. BMC Bioinformatics 8: (2007)
39		Benjamin Schuster-Böckler, Alex Bateman: Reuse of structural domain-domain interactions in protein networks. BMC Bioinformatics 8: (2007)
38		Alfonso Valencia, Alex Bateman: Editorial. Bioinformatics 23(2): 133 (2007)
37		Alex Bateman, Robert D. Finn: SCOOP: a simple method for identification of novel protein superfamily relationships. Bioinformatics 23(7): 809-814 (2007)
36		Alex Bateman: Editorial. Nucleic Acids Research 35(Database-Issue): 1-2 (2007)
35		Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Peer Bork, Virginie Buillard, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Louise Daugherty, Mark Dibley, Robert D. Finn, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicolas Hulo, Sarah Hunter, Daniel Kahn, Alexander Kanapin, Anish Kejariwal, Alberto Labarga, Petra S. Langendijk-Genevaux, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Jaina Mistry, Alex Mitchell, Anastasia N. Nikolskaya, Sandra E. Orchard, Christine A. Orengo, Robert Petryszak, Jeremy D. Selengut, Christian J. A. Sigrist, Paul D. Thomas, Franck Valentin, Derek Wilson, Cathy H. Wu, Corin Yeats: New developments in the InterPro database. Nucleic Acids Research 35(Database-Issue): 224-228 (2007)
	2006
34		Alex Bateman: Bioinformatics - The new home for protein sequence motifs. Bioinformatics 22(1): 2 (2006)
33		Alfonso Valencia, Alex Bateman: Software patents in Bioinformatics. Bioinformatics 22(12): 1415 (2006)
32		Alex Bateman, Alfonso Valencia: Structural genomics meets computational biology. Bioinformatics 22(19): 2319 (2006)
31		Alex Bateman: EDITORIAL. Nucleic Acids Research 34(Database-Issue): 1 (2006)
30		Sam Griffiths-Jones, Russell J. Grocock, Stijn van Dongen, Alex Bateman, Anton J. Enright: miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Research 34(Database-Issue): 140-144 (2006)
29		Robert D. Finn, Jaina Mistry, Benjamin Schuster-Böckler, Sam Griffiths-Jones, Volker Hollich, Timo Lassmann, Simon Moxon, Mhairi Marshall, Ajay Khanna, Richard Durbin, Sean R. Eddy, Erik L. L. Sonnhammer, Alex Bateman: Pfam: clans, web tools and services. Nucleic Acids Research 34(Database-Issue): 247-251 (2006)
	2005
28		Alfonso Valencia, Alex Bateman: Increasing the Impact of Bioinformatics. Bioinformatics 21(1): 1-1 (2005)
27		Benjamin Schuster-Böckler, Alex Bateman: Visualizing profile-profile alignment: pairwise HMM logos. Bioinformatics 21(12): 2912-2913 (2005)
26		Alex Bateman, Alfonso Valencia: An update from the Bioinformatics Editors. Bioinformatics 21(24): 4319 (2005)
25		Robert D. Finn, Mhairi Marshall, Alex Bateman: iPfam: visualization of protein?Cprotein interactions in PDB at domain and amino acid resolutions. Bioinformatics 21(3): 410-412 (2005)
24		Alex Bateman, Matthew T. G. Holden, Corin Yeats: The G5 domain: a potential N-acetylglucosamine recognition domain involved in biofilm formation. Bioinformatics 21(8): 1301-1303 (2005)
23		Alex Bateman: Editorial. Nucleic Acids Research 33(Database-Issue): 1 (2005)
22		Sam Griffiths-Jones, Simon Moxon, Mhairi Marshall, Ajay Khanna, Sean R. Eddy, Alex Bateman: Rfam: annotating non-coding RNAs in complete genomes. Nucleic Acids Research 33(Database-Issue): 121-124 (2005)
21		Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Paul Bradley, Peer Bork, Phillip Bucher, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Jennifer McDowall, Alex Mitchell, Anastasia N. Nikolskaya, Sandra E. Orchard, Marco Pagni, Chris P. Ponting, Emmanuel Quevillon, Jeremy D. Selengut, Christian J. A. Sigrist, Ville Silventoinen, David J. Studholme, Robert Vaughan, Cathy H. Wu: InterPro, progress and status in 2005. Nucleic Acids Research 33(Database-Issue): 201-205 (2005)
	2004
20		Shane C. Dillon, Alex Bateman: The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases. BMC Bioinformatics 5: 109 (2004)
19		Lachlan James M. Coin, Alex Bateman, Richard Durbin: Enhanced protein domain discovery using taxonomy. BMC Bioinformatics 5: 56 (2004)
18		Alex Bateman, Alfonso Valencia: New Leadership for Bioinformatics. Bioinformatics 20(12): 1821 (2004)
17		Alex Bateman, Lachlan James M. Coin, Richard Durbin, Robert D. Finn, Volker Hollich, Sam Griffiths-Jones, Ajay Khanna, Mhairi Marshall, Simon Moxon, Erik L. L. Sonnhammer, David J. Studholme, Corin Yeats, Sean R. Eddy: The Pfam protein families database. Nucleic Acids Research 32(Database-Issue): 138-141 (2004)
	2003
16		David J. Studholme, Neil D. Rawlings, Alan J. Barrett, Alex Bateman: A comparison of Pfam and MEROPS: Two databases, one comprehensive, and one specialised. BMC Bioinformatics 4: 17 (2003)
15		Alex Bateman, Valerie A. Kickhoefer: The TROVE module: A common element in Telomerase, Ro and Vault ribonucleoproteins. BMC Bioinformatics 4: 49 (2003)
14		Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Daniel Barrell, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Sam Griffiths-Jones, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, David Lonsdale, Ville Silventoinen, Sandra E. Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Jeremy D. Selengut, Florence Servant, Christian J. A. Sigrist, Robert Vaughan, Evgeni M. Zdobnov: The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Research 31(1): 315-318 (2003)
13		Sam Griffiths-Jones, Alex Bateman, Mhairi Marshall, Ajay Khanna, Sean R. Eddy: Rfam: an RNA family database. Nucleic Acids Research 31(1): 439-441 (2003)
	2002
12		Alex Bateman: The SGS3 protein involved in PTGS finds a family. BMC Bioinformatics 3: 21 (2002)
11		Kevin L. Howe, Alex Bateman, Richard Durbin: QuickTree: building huge Neighbour-Joining trees of protein sequences. Bioinformatics 18(11): 1546-1547 (2002)
10		Sam Griffiths-Jones, Alex Bateman: The use of structure information to increase alignment accuracy does not aid homologue detection with profile HMMs. Bioinformatics 18(9): 1243-1249 (2002)
9		Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Sam Griffiths-Jones, Daniel H. Haft, Henning Hermjakob, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, Sue Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Florence Servant, Christian J. A. Sigrist: InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites Briefings in Bioinformatics 3(3): 225-235 (2002)
8		Alex Bateman, Daniel H. Haft: HMM-based databases in InterPro. Briefings in Bioinformatics 3(3): 236-245 (2002)
7		Alex Bateman, Ewan Birney, Lorenzo Cerutti, Richard Durbin, Laurence Ettwiller, Sean R. Eddy, Sam Griffiths-Jones, Kevin L. Howe, Mhairi Marshall, Erik L. L. Sonnhammer: The Pfam Protein Families Database. Nucleic Acids Research 30(1): 276-280 (2002)
	2001
6		Paul I. W. de Bakker, Alex Bateman, David F. Burke, Ricardo Núñez Miguel, Kenji Mizuguchi, J. Shi, Hiroki Shirai, Tom L. Blundell: HOMSTRAD: adding sequence information to structure-based alignments of homologous protein families. Bioinformatics 17(8): 748-749 (2001)
5		Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov: The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Research 29(1): 37-40 (2001)
	2000
4		Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, Ewan Birney, Margaret Biswas, Philipp Bucher, Lorenzo Cerutti, Florence Corpet, Michael D. R. Croning, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Henning Hermjakob, Nicolas Hulo, Inge Jonassen, Daniel Kahn, Alexander Kanapin, Youla Karavidopoulou, Rodrigo Lopez, Beate Marx, Nicola J. Mulder, Thomas M. Oinn, Marco Pagni, Florence Servant, Christian J. A. Sigrist, Evgeni M. Zdobnov: InterPro-an integrated documentation resource for protein families, domains and functional sites. Bioinformatics 16(12): 1145-1150 (2000)
3		Alex Bateman, Ewan Birney, Richard Durbin, Sean R. Eddy, Kevin L. Howe, Erik L. L. Sonnhammer: The Pfam Protein Families Database. Nucleic Acids Research 28(1): 263-266 (2000)
	1999
2		Alex Bateman, Ewan Birney, Richard Durbin, Sean R. Eddy, Robert D. Finn, Erik L. L. Sonnhammer: Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins. Nucleic Acids Research 27(1): 260-262 (1999)
	1998
1		Erik L. L. Sonnhammer, Sean R. Eddy, Ewan Birney, Alex Bateman, Richard Durbin: Pfam: multiple sequence alignments and HMM-profiles of protein domains. Nucleic Acids Research 26(1): 320-322 (1998)

Coauthor Index

1	Rolf Apweiler	[4] [5] [9] [14] [21] [35] [45]
2	Terri K. Attwood (Teresa K. Attwood)	[4] [5] [9] [14] [21] [35] [45]
3	Amos Bairoch	[4] [5] [9] [14] [21] [35] [45]
4	Paul I. W. de Bakker	[6]
5	Daniel Barrell	[14]
6	Alan J. Barrett	[16]
7	Andreas Biegert	[48]
8	David Binns	[9] [14] [21] [35] [45]
9	Ewan Birney	[1] [2] [3] [4] [5] [7]
10	Margaret Biswas	[4] [5] [9] [14]
11	Tom L. Blundell	[6]
12	Peer Bork	[9] [14] [21] [35] [45]
13	Paul Bradley	[9] [14] [21]
14	Philipp Bucher	[4] [5] [9] [14]
15	Phillip Bucher	[21]
16	Virginie Buillard	[35]
17	David F. Burke	[6]
18	Goran Ceric	[41]
19	Lorenzo Cerutti	[4] [5] [7] [21] [35]
20	Penny C. Coggill	[41]
21	Lachlan James M. Coin	[17] [19]
22	Richard R. Copley	[9] [14] [21] [35]
23	Florence Corpet	[4] [5]
24	Emmanuel Courcelle	[9] [14] [21] [35]
25	Michael D. R. Croning	[4] [5]
26	Ujjwal Das	[14] [21] [35] [45]
27	Jennifer Daub	[46]
28	Louise Daugherty	[35] [45]
29	Mark Dibley	[35]
30	Shane C. Dillon	[20]
31	Stijn van Dongen	[30]
32	Lauranne Duquenne	[45]
33	Richard Durbin	[1] [2] [3] [4] [5] [7] [9] [11] [14] [17] [19] [21] [29]
34	Sean R. Eddy	[1] [2] [3] [7] [13] [17] [22] [29] [41] [46]
35	Anton J. Enright	[30]
36	Laurence Ettwiller	[7]
37	Laurent Falquet	[4] [5] [9] [14]
38	Robert D. Finn	[2] [17] [25] [29] [35] [37] [40] [41] [43] [45] [46] [48]
39	Wolfgang Fleischmann	[4] [5] [9] [14] [21] [35]
40	Kristoffer Forslund	[41]
41	Paul P. Gardner	[46]
42	Julian Gough	[21] [35] [45]
43	Jérôme Gouzy	[4] [5] [9]
44	Sam Griffiths-Jones	[7] [9] [10] [13] [14] [17] [22] [29] [30] [46]
45	Russell J. Grocock	[30]
46	Daniel H. Haft	[8] [9] [14] [21] [35] [45]
47	Nicola Harte	[14] [21]
48	Henning Hermjakob	[4] [5] [9]
49	Matthew T. G. Holden	[24]
50	Volker Hollich	[17] [29]
51	Hans-Rudolf Hotz	[41]
52	Kevin L. Howe	[3] [7] [11]
53	Nicolas Hulo	[4] [5] [9] [14] [21] [35] [45]
54	Sarah Hunter	[35] [45]
55	Inge Jonassen	[4] [5]
56	Daniel Kahn	[4] [5] [9] [14] [21] [35] [45]
57	Alexander Kanapin	[4] [5] [9] [14] [21] [35]
58	Youla Karavidopoulou	[4] [5]
59	Anish Kejariwal	[35]
60	Elizabeth Kelly	[45]
61	Ajay Khanna	[13] [17] [22] [29]
62	Valerie A. Kickhoefer	[15]
63	Diana L. Kolbe	[46]
64	Maria Krestyaninova	[9] [14] [21]
65	Alberto Labarga	[35]
66	Petra S. Langendijk-Genevaux	[35]
67	Timo Lassmann	[29]
68	Aurélie Laugraud	[45]
69	Ivica Letunic	[9] [14] [21] [35] [45]
70	Stinus Lindgreen	[46]
71	David Lonsdale	[14] [21] [35] [45]
72	Rodrigo Lopez	[4] [5] [9] [14] [21] [35] [45]
73	Martin Madera	[21] [35] [45]
74	Mhairi Marshall	[7] [13] [17] [22] [25] [29]
75	Beate Marx	[4] [5]
76	John Maslen	[21] [35] [45]
77	Craig McAnulla	[35] [45]
78	Jennifer McDowall	[21] [35] [45]
79	Ricardo Núñez Miguel	[6]
80	Jaina Mistry	[29] [35] [40] [41] [45]
81	Alex Mitchell	[21] [35] [45]
82	Kenji Mizuguchi	[6]
83	Simon Moxon	[17] [22] [29]
84	Nicola J. Mulder	[4] [5] [9] [14] [21] [35] [45]
85	Darren A. Natale	[45]
86	Eric P. Nawrocki	[46]
87	Anastasia N. Nikolskaya	[21] [35]
88	Thomas M. Oinn (Tom Oinn)	[4] [5]
89	Sandra E. Orchard	[14] [21] [35]
90	Sue Orchard	[9]
91	Christine A. Orengo	[35] [45]
92	Marco Pagni	[4] [5] [9] [14] [21]
93	Robert Petryszak	[35]
94	David Peyruc	[9] [14]
95	Chris P. Ponting	[9] [14] [21]
96	John Quackenbush	[47]
97	Emmanuel Quevillon	[21]
98	Antony F. Quinn	[45]
99	Neil D. Rawlings	[16]
100	Stephen John Sammut	[41] [43]
101	Benjamin Schuster-Böckler	[27] [29] [39]
102	Jeremy D. Selengut	[14] [21] [35] [45]
103	Florence Servant	[4] [5] [9] [14]
104	J. Shi	[6]
105	Hiroki Shirai	[6]
106	Christian J. A. Sigrist	[4] [5] [9] [14] [21] [35] [45]
107	Ville Silventoinen	[14] [21]
108	Peter J. Sims	[48]
109	Johannes Söding	[48]
110	Erik L. L. Sonnhammer	[1] [2] [3] [7] [17] [29] [41]
111	David J. Studholme	[16] [17] [21]
112	John G. Tate	[41] [46]
113	Manjula Thimma	[45]
114	Paul D. Thomas	[35] [45]
115	Alfonso Valencia	[18] [26] [28] [32] [33] [38]
116	Franck Valentin	[35] [45]
117	Robert Vaughan	[14] [21]
118	Therese Wiedmer	[48]
119	Adam C. Wilkinson	[46]
120	Derek Wilson	[35] [45]
121	Matt Wood	[49]
122	Jonathan D. Wren	[44]
123	Cathy H. Wu	[21] [35] [45]
124	Corin Yeats	[17] [24] [35] [45]
125	Evgeni M. Zdobnov	[4] [5] [14]

Colors in the list of coauthors