Anne Bergeron

	2009
42		Guylaine Poisson, Mahdi Belcaid, Anne Bergeron: Comparative Genomics and Extensive Recombinations in Phage Communities. RECOMB-CG 2009: 205-216
41		Aïda Ouangraoua, Anne Bergeron: Parking Functions, Labeled Trees and DCJ Sorting Scenarios. RECOMB-CG 2009: 24-35
40		Aïda Ouangraoua, Anne Bergeron: Parking functions, labeled trees and DCJ sorting scenarios CoRR abs/0903.2499: (2009)
39		Anne Bergeron, Julia Mixtacki, Jens Stoye: A new linear time algorithm to compute the genomic distance via the double cut and join distance. Theor. Comput. Sci. 410(51): 5300-5316 (2009)
	2008
38		Anne Bergeron, Julia Mixtacki, Jens Stoye: HP Distance Via Double Cut and Join Distance. CPM 2008: 56-68
37		Anne Bergeron, Julia Mixtacki, Jens Stoye: On Computing the Breakpoint Reuse Rate in Rearrangement Scenarios. RECOMB-CG 2008: 226-240
36		Vincent Lacroix, Michael Sammeth, Roderic Guigó, Anne Bergeron: Exact Transcriptome Reconstruction from Short Sequence Reads. WABI 2008: 50-63
35		Anne Bergeron, Cedric Chauve, Fabien de Montgolfier, Mathieu Raffinot: Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs. SIAM J. Discrete Math. 22(3): 1022-1039 (2008)
	2007
34		Mahdi Belcaid, Anne Bergeron, Annie Chateau, Cedric Chauve, Yannick Gingras, Guylaine Poisson, M. Vendette: Exploring Genome Rearrangements using Virtual Hybridization. APBC 2007: 205-214
33		Eric Tannier, Anne Bergeron, Marie-France Sagot: Advances on sorting by reversals. Discrete Applied Mathematics 155(6-7): 881-888 (2007)
32		Guylaine Poisson, Cedric Chauve, Xin Chen, Anne Bergeron: FragAnchor: A Large-Scale Predictor of Glycosylphosphatidylinositol Anchors in Eukaryote Protein Sequences by Qualitative Scoring. Genomics, Proteomics & Bioinformatics 5(2): 121-130 (2007)
31		Sèverine Bérard, Anne Bergeron, Cedric Chauve, Christophe Paul: Perfect Sorting by Reversals Is Not Always Difficult. IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 4-16 (2007)
	2006
30		Anne Bergeron, Julia Mixtacki, Jens Stoye: A Unifying View of Genome Rearrangements. WABI 2006: 163-173
29		Anne Bergeron, Julia Mixtacki, Jens Stoye: On Sorting by Translocations. Journal of Computational Biology 13(2): 567-578 (2006)
28		Anne Bergeron, Jens Stoye: On the Similarity of Sets of Permutations and Its Applications to Genome Comparison. Journal of Computational Biology 13(7): 1340-1354 (2006)
	2005
27		Anne Bergeron, Cedric Chauve, Fabien de Montgolfier, Mathieu Raffinot: Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs. ESA 2005: 779-790
26		Anne Bergeron, Julia Mixtacki, Jens Stoye: On Sorting by Translocations. RECOMB 2005: 615-629
25		Sèverine Bérard, Anne Bergeron, Cedric Chauve, Christophe Paul: Perfect Sorting by Reversals Is Not Always Difficult. WABI 2005: 228-238
24		Anne Bergeron: A very elementary presentation of the Hannenhalli-Pevzner theory. Discrete Applied Mathematics 146(2): 134-145 (2005)
	2004
23		Anne Bergeron, Julia Mixtacki, Jens Stoye: Reversal Distance without Hurdles and Fortresses. CPM 2004: 388-399
22		Sèverine Bérard, Anne Bergeron, Cedric Chauve: Conservation of Combinatorial Structures in Evolution Scenarios. Comparative Genomics 2004: 1-14
21		Anne Bergeron, Mathieu Blanchette, Annie Chateau, Cedric Chauve: Reconstructing Ancestral Gene Orders Using Conserved Intervals. WABI 2004: 14-25
20		Anne Bergeron, Sylvie Hamel: From cascade decompositions to bit-vector algorithms. Theor. Comput. Sci. 313(1): 3-16 (2004)
19		Marie-Pierre Béal, Anne Bergeron, Sylvie Corteel, Mathieu Raffinot: An algorithmic view of gene teams. Theor. Comput. Sci. 320(2-3): 395-418 (2004)
	2003
18		Anne Bergeron, Jens Stoye: On the Similarity of Sets of Permutations and Its Applications to Genome Comparison. COCOON 2003: 68-79
17		Nicolas Luc, Jean-Loup Risler, Anne Bergeron, Mathieu Raffinot: Gene teams: a new formalization of gene clusters for comparative genomics. Computational Biology and Chemistry 27(1): 59-67 (2003)
	2002
16		Anne Bergeron, Steffen Heber, Jens Stoye: Common intervals and sorting by reversals: a marriage of necessity. ECCB 2002: 54-63
15		Anne Bergeron, Sylvie Corteel, Mathieu Raffinot: The Algorithmic of Gene Teams. WABI 2002: 464-476
14		Anne Bergeron, Sylvie Hamel: Vector Algorithms for Approximate String Matching. Int. J. Found. Comput. Sci. 13(1): 53-66 (2002)
	2001
13		Anne Bergeron, Sylvie Hamel: Cascade Decompositions are Bit-Vector Algorithms. CIAA 2001: 13-26
12		Anne Bergeron: A Very Elementary Presentation of the Hannenhalli-Pevzner Theory. CPM 2001: 106-117
11		Anne Bergeron, François Strasbourg: Experiments in Computing Sequences of Reversals. WABI 2001: 164-174
	2000
10		Anne Bergeron, Sylvie Hamel: Fast Implementations of Automata Computations. CIAA 2000: 47-56
	1999
9		Anne Bergeron, Jean-Christophe Manzoni: An Automated Analysis of Ping-Pong Interactions in E-mail Services. TACAS 1999: 134-147
8		Anne Bergeron, Riccardo Catalano: Analysis of Reactive Systems with n Timers. WIA 1999: 27-38
	1998
7		Marie-Chantal Beaulieu, Anne Bergeron: Automata and Computational Probabilities. Workshop on Implementing Automata 1998: 164-177
6		Anne Bergeron, Paul Geanta, Dominique Bergeron: The Death factors: a combinatorial analysis. In Silico Biology 1: 13 (1998)
	1997
5		Anne Bergeron: On the Rational Behaviors of Concurrent Timers. Theor. Comput. Sci. 189(1-2): 229-237 (1997)
	1995
4		Anne Bergeron: Symbolic Timing Devices. AMAST 1995: 504-517
3		Anne Bergeron: Sharing Out Control in Distributed Processes. Theor. Comput. Sci. 139(1&2): 163-186 (1995)
	1993
2		Anne Bergeron: A Unified Approach to Control Problems in Discrete Event Processes. ITA 27(6): 555-573 (1993)
	1992
1		Anne Bergeron: Assisted Mathematics: The Case of Discrete Probabilities. Intelligent Tutoring Systems 1992: 40-49

Coauthor Index

1	Marie-Pierre Béal	[19]
2	Marie-Chantal Beaulieu	[7]
3	Mahdi Belcaid	[34] [42]
4	Sèverine Bérard	[22] [25] [31]
5	Dominique Bergeron	[6]
6	Mathieu Blanchette	[21]
7	Riccardo Catalano	[8]
8	Annie Chateau	[21] [34]
9	Cedric Chauve	[21] [22] [25] [27] [31] [32] [34] [35]
10	Xin Chen	[32]
11	Sylvie Corteel	[15] [19]
12	Paul Geanta	[6]
13	Yannick Gingras	[34]
14	Roderic Guigó	[36]
15	Sylvie Hamel	[10] [13] [14] [20]
16	Steffen Heber	[16]
17	Vincent Lacroix	[36]
18	Nicolas Luc	[17]
19	Jean-Christophe Manzoni	[9]
20	Julia Mixtacki	[23] [26] [29] [30] [37] [38] [39]
21	Fabien de Montgolfier	[27] [35]
22	Aïda Ouangraoua	[40] [41]
23	Christophe Paul	[25] [31]
24	Guylaine Poisson	[32] [34] [42]
25	Mathieu Raffinot	[15] [17] [19] [27] [35]
26	Jean-Loup Risler	[17]
27	Marie-France Sagot	[33]
28	Michael Sammeth	[36]
29	Jens Stoye	[16] [18] [23] [26] [28] [29] [30] [37] [38] [39]
30	François Strasbourg	[11]
31	Eric Tannier	[33]
32	M. Vendette	[34]

Colors in the list of coauthors