 | 2009 |
|---|
| 16 |       | Ralph L. Kodell,
Bruce A. Pearce,
Songjoon Baek,
Hojin Moon,
Hongshik Ahn,
John F. Young,
James J. Chen:
A model-free ensemble method for class prediction with application to biomedical decision making.
Artificial Intelligence in Medicine 46(3): 267-276 (2009) |
| 15 | | Chen-An Tsai,
James J. Chen:
Multivariate analysis of variance test for gene set analysis.
Bioinformatics 25(7): 897-903 (2009) |
| 2008 |
|---|
| 14 | | Huixiao Hong,
Zhenqiang Su,
Weigong Ge,
Leming M. Shi,
Roger Perkins,
Hong Fang,
Joshua Xu,
James J. Chen,
Tao Han,
Jim Kaput,
James C. Fuscoe,
Weida Tong:
Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.
BMC Bioinformatics 9(S-9): (2008) |
| 2007 |
|---|
| 13 | | Hojin Moon,
Hongshik Ahn,
Ralph L. Kodell,
Songjoon Baek,
Chien-Ju Lin,
James J. Chen:
Ensemble methods for classification of patients for personalized medicine with high-dimensional data.
Artificial Intelligence in Medicine 41(3): 197-207 (2007) |
| 12 | | James J. Chen,
Chen-An Tsai,
ShengLi Tzeng,
Chun-Houh Chen:
Gene selection with multiple ordering criteria.
BMC Bioinformatics 8: (2007) |
| 11 | | James J. Chen,
Huey-miin Hsueh,
Robert R. Delongchamp,
Chien-Ju Lin,
Chen-An Tsai:
Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data.
BMC Bioinformatics 8: (2007) |
| 10 | | James J. Chen,
Taewon Lee,
Robert R. Delongchamp,
Tao Chen,
Chen-An Tsai:
Significance analysis of groups of genes in expression profiling studies.
Bioinformatics 23(16): 2104-2112 (2007) |
| 9 | | Hongshik Ahn,
Hojin Moon,
Melissa J. Fazzari,
Noha Lim,
James J. Chen,
Ralph L. Kodell:
Classification by ensembles from random partitions of high-dimensional data.
Computational Statistics & Data Analysis 51(12): 6166-6179 (2007) |
| 8 | | Chen-An Tsai,
James J. Chen:
Kernel estimation for adjusted p.
Computational Statistics & Data Analysis 51(8): 3885-3897 (2007) |
| 2005 |
|---|
| 7 | | Leming M. Shi,
Weida Tong,
Hong Fang,
Uwe Scherf,
Jing Han,
Raj K. Puri,
Felix W. Frueh,
Federico M. Goodsaid,
Lei Guo,
Zhenqiang Su,
Tao Han,
James C. Fuscoe,
Z. Alex Xu,
Tucker A. Patterson,
Huixiao Hong,
Qian Xie,
Roger Perkins,
James J. Chen,
Daniel A. Casciano:
Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential.
BMC Bioinformatics 6(S-2): (2005) |
| 6 | | Leming M. Shi,
Weida Tong,
Zhenqiang Su,
Tao Han,
Jing Han,
Raj K. Puri,
Hong Fang,
Felix W. Frueh,
Federico M. Goodsaid,
Lei Guo,
William S. Branham,
James J. Chen,
Z. Alex Xu,
Stephen C. Harris,
Huixiao Hong,
Qian Xie,
Roger Perkins,
James C. Fuscoe:
Microarray scanner calibration curves: characteristics and implications.
BMC Bioinformatics 6(S-2): (2005) |
| 5 | | Dung-Tsa Chen,
James J. Chen,
Seng-jaw Soong:
Probe rank approaches for gene selection in oligonucleotide arrays with a small number of replicates.
Bioinformatics 21(12): 2861-2866 (2005) |
| 4 | | Chen-An Tsai,
Sue-Jane Wang,
Dung-Tsa Chen,
James J. Chen:
Sample size for gene expression microarray experiments.
Bioinformatics 21(8): 1502-1508 (2005) |
| 3 | | Yunhee Choi,
Hongshik Ahn,
James J. Chen:
Regression trees for analysis of count data with extra Poisson variation.
Computational Statistics & Data Analysis 49(3): 893-915 (2005) |
| 2004 |
|---|
| 2 | | James J. Chen,
Robert R. Delongchamp,
Chen-An Tsai,
Huey-miin Hsueh,
Frank Sistare,
Karol L. Thompson,
Varsha G. Desai,
James C. Fuscoe:
Analysis of variance components in gene expression data.
Bioinformatics 20(9): 1436-1446 (2004) |
| 1 | | Sue-Jane Wang,
James J. Chen:
Sample Size for Identifying Differentially Expressed Genes in Microarray Experiments.
Journal of Computational Biology 11(4): 714-726 (2004) |
