| 2008 |
|---|
| 68 | EE | Ting Chen,
Xiaoxu Wang,
Dimitris N. Metaxas,
Leon Axel:
3D cardiac motion tracking using Robust Point Matching and meshless deformable models.
ISBI 2008: 280-283 |
| 2007 |
|---|
| 67 | EE | Ting Chen,
Sohae Chung,
Leon Axel:
Automated Tag Tracking Using Gabor Filter Bank, Robust Point Matching, and Deformable Models.
FIMH 2007: 22-31 |
| 66 | EE | Xiaoxu Wang,
Joël Schaerer,
Suejung B. Huh,
Zhen Qian,
Dimitris N. Metaxas,
Ting Chen,
Leon Axel:
Reconstruction of Detailed Left Ventricle Motion from tMRI Using Deformable Models.
FIMH 2007: 60-69 |
| 65 | EE | Leon Axel,
Sohae Chung,
Ting Chen:
Tagged Mri Analysis Using Gabor Filters.
ISBI 2007: 684-687 |
| 64 | EE | Piramanayagam Arumuga Nainar,
Ting Chen,
Jake Rosin,
Ben Liblit:
Statistical debugging using compound boolean predicates.
ISSTA 2007: 5-15 |
| 63 | EE | Ting Chen,
Sohae Chung,
Leon Axel:
2D Motion Analysis of Long Axis Cardiac Tagged MRI.
MICCAI (2) 2007: 469-476 |
| 62 | EE | Eric Chu,
Akanksha Baid,
Ting Chen,
AnHai Doan,
Jeffrey F. Naughton:
A Relational Approach to Incrementally Extracting and Querying Structure in Unstructured Data.
VLDB 2007: 1045-1056 |
| 61 | EE | Debojyoti Dutta,
Ting Chen:
Speeding up tandem mass spectrometry database search: metric embeddings and fast near neighbor search.
Bioinformatics 23(5): 612-618 (2007) |
| 60 | EE | Ting Chen,
Frank K. Hwang:
A competitive algorithm in searching for many edges in a hypergraph.
Discrete Applied Mathematics 155(4): 566-571 (2007) |
| 2006 |
|---|
| 59 | EE | Vivy Suhendra,
Tulika Mitra,
Abhik Roychoudhury,
Ting Chen:
Efficient detection and exploitation of infeasible paths for software timing analysis.
DAC 2006: 358-363 |
| 58 | EE | Zhidong Tu,
Li Wang,
Michelle N. Arbeitman,
Ting Chen,
Fengzhu Sun:
An integrative approach for causal gene identification and gene regulatory pathway inference.
ISMB (Supplement of Bioinformatics) 2006: 489-496 |
| 57 | EE | Biman Chakraborty,
Ting Chen,
Tulika Mitra,
Abhik Roychoudhury:
Handling Constraints in Multi-Objective GA for Embedded System Design.
VLSI Design 2006: 305-310 |
| 56 | EE | Debojyoti Dutta,
Rajarshi Guha,
Peter C. Jurs,
Ting Chen:
Scalable Partitioning and Exploration of Chemical Spaces Using Geometric Hashing.
Journal of Chemical Information and Modeling 46(1): 321-333 (2006) |
| 55 | EE | Rajarshi Guha,
Debojyoti Dutta,
Peter C. Jurs,
Ting Chen:
R-NN Curves: An Intuitive Approach to Outlier Detection Using a Distance Based Method.
Journal of Chemical Information and Modeling 46(4): 1713-1722 (2006) |
| 54 | EE | Rajarshi Guha,
Debojyoti Dutta,
Peter C. Jurs,
Ting Chen:
Local Lazy Regression: Making Use of the Neighborhood to Improve QSAR Predictions.
Journal of Chemical Information and Modeling 46(4): 1836-1847 (2006) |
| 2005 |
|---|
| 53 | EE | Ping Guo,
Yang Zhou,
Jun Zhuang,
Ting Chen,
Yan-Rong Kang:
An Efficient Algorithm for Mining Both Closed and Maximal Frequent Free Subtrees Using Canonical Forms.
ADMA 2005: 96-107 |
| 52 | EE | Leon Axel,
Ting Chen,
Tushar Manglik:
Dense Myocardium Deformation Estimation for 2D Tagged MRI.
FIMH 2005: 446-456 |
| 51 | EE | Yunhu Wan,
Ting Chen:
A Hidden Markov Model Based Scoring Function for Mass Spectrometry Database Search.
RECOMB 2005: 342-356 |
| 50 | EE | Vivy Suhendra,
Tulika Mitra,
Abhik Roychoudhury,
Ting Chen:
WCET Centric Data Allocation to Scratchpad Memory.
RTSS 2005: 223-232 |
| 49 | EE | Yao-Ting Huang,
Kun-Mao Chao,
Ting Chen:
An approximation algorithm for haplotype inference by maximum parsimony.
SAC 2005: 146-150 |
| 48 | EE | Ting Chen,
Jiaheng Lu,
Tok Wang Ling:
On Boosting Holism in XML Twig Pattern Matching using Structural Indexing Techniques.
SIGMOD Conference 2005: 455-466 |
| 47 | EE | Jiaheng Lu,
Tok Wang Ling,
Chee Yong Chan,
Ting Chen:
From Region Encoding To Extended Dewey: On Efficient Processing of XML Twig Pattern Matching.
VLDB 2005: 193-204 |
| 46 | EE | Ting Chen,
Tulika Mitra,
Abhik Roychoudhury,
Vivy Suhendra:
Exploiting Branch Constraints without Exhaustive Path Enumeration.
WCET 2005 |
| 45 | EE | Jiaheng Lu,
Ting Chen,
Tok Wang Ling:
TJFast: effective processing of XML twig pattern matching.
WWW (Special interest tracks and posters) 2005: 1118-1119 |
| 44 | EE | Yao-Ting Huang,
Kui Zhang,
Ting Chen,
Kun-Mao Chao:
Selecting additional tag SNPs for tolerating missing data in genotyping.
BMC Bioinformatics 6: 263 (2005) |
| 43 | EE | Kui Zhang,
Zhaohui S. Qin,
Ting Chen,
Jun S. Liu,
Michael S. Waterman,
Fengzhu Sun:
HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms.
Bioinformatics 21(1): 131-134 (2005) |
| 42 | EE | Shih-Chieh Su,
C. C. Jay Kuo,
Ting Chen:
Inference of missing SNPs and information quantity measurements for haplotype blocks.
Bioinformatics 21(9): 2001-2007 (2005) |
| 2004 |
|---|
| 41 | EE | Jiaheng Lu,
Ting Chen,
Tok Wang Ling:
Efficient processing of XML twig patterns with parent child edges: a look-ahead approach.
CIKM 2004: 533-542 |
| 40 | EE | Xiaolei Huang,
Dimitris N. Metaxas,
Ting Chen:
MetaMorphs: Deformable Shape and Texture Models.
CVPR (1) 2004: 496-503 |
| 39 | EE | Daofeng Luo,
Ting Chen,
Tok Wang Ling,
Xiaofeng Meng:
On View Transformation Support for a Native XML DBMS.
DASFAA 2004: 226-231 |
| 38 | EE | Ting Chen,
Tok Wang Ling,
Chee Yong Chan:
Prefix Path Streaming: A New Clustering Method for Optimal Holistic XML Twig Pattern Matching.
DEXA 2004: 801-810 |
| 37 | EE | Ting Chen,
Dimitris N. Metaxas,
Leon Axel:
3D Cardiac Anatomy Reconstruction Using High Resolution CT Data.
MICCAI (1) 2004: 411-418 |
| 36 | EE | Tushar Manglik,
Alexandru Cernicanu,
Vinay S. Pai,
Daniel Kim,
Ting Chen,
Pradnya Dugal,
Bharathi Batchu,
Leon Axel:
Gabor Filter-Based Automated Strain Computation from Tagged MR Images.
MICCAI (2) 2004: 1064-1065 |
| 35 | EE | Yao-Ting Huang,
Kui Zhang,
Ting Chen,
Kun-Mao Chao:
Approximation Algorithms for the Selection of Robust Tag SNPs.
WABI 2004: 278-289 |
| 34 | EE | Yuan Fa,
Ya Bing Chen,
Tok Wang Ling,
Ting Chen:
Materialized View Maintenance for XML Documents.
WISE 2004: 365-371 |
| 33 | EE | Minghua Deng,
Zhidong Tu,
Fengzhu Sun,
Ting Chen:
Mapping gene ontology to proteins based on protein-protein interaction data.
Bioinformatics 20(6): 895-902 (2004) |
| 32 | EE | Minghua Deng,
Ting Chen,
Fengzhu Sun:
An Integrated Probabilistic Model for Functional Prediction of Proteins.
Journal of Computational Biology 11(2/3): 463-475 (2004) |
| 2003 |
|---|
| 31 | | Bingwen Lu,
Ting Chen:
A suffix tree approach to the interpretation of tandem mass spectra: applications to peptides of non-specific digestion and post-translational modifications.
ECCB 2003: 113-121 |
| 30 | EE | Ting Chen,
Dimitris N. Metaxas:
Gibbs Prior Models, Marching Cubes, and Deformable Models: A Hybrid Framework for 3D Medical Image Segmentation.
MICCAI (2) 2003: 703-710 |
| 29 | EE | Minghua Deng,
Fengzhu Sun,
Ting Chen:
Assessment of the reliability of protein-protein interactions and protein function prediction.
Pacific Symposium on Biocomputing 2003: 140-151 |
| 28 | EE | Kui Zhang,
Fengzhu Sun,
Michael S. Waterman,
Ting Chen:
Dynamic programming algorithms for haplotype block partitioning: applications to human chromosome 21 haplotype data.
RECOMB 2003: 332-340 |
| 27 | EE | Minghua Deng,
Ting Chen,
Fengzhu Sun:
An integrated probabilistic model for functional prediction of proteins.
RECOMB 2003: 95-103 |
| 26 | EE | Yong He,
Ting Chen:
A New Approximation Algorithm for Sorting of Signed Permutations.
J. Comput. Sci. Technol. 18(1): 125-130 (2003) |
| 25 | | Bingwen Lu,
Ting Chen:
A Suboptimal Algorithm for De Novo Peptide Sequencing via Tandem Mass Spectrometry.
Journal of Computational Biology 10(1): 1-12 (2003) |
| 24 | EE | Minghua Deng,
Kui Zhang,
Shipra Mehta,
Ting Chen,
Fengzhu Sun:
Prediction of Protein Function Using Protein-Protein Interaction Data.
Journal of Computational Biology 10(6): 947-960 (2003) |
| 2002 |
|---|
| 23 | EE | Minghua Deng,
Kui Zhang,
Shipra Mehta,
Ting Chen,
Fengzhu Sun:
Prediction of Protein Function Using Protein-Protein Interaction Data.
CSB 2002: 197-206 |
| 22 | EE | Kui Zhang,
Ting Chen,
Michael S. Waterman,
Zhaohui S. Qin,
Jun S. Liu,
Fengzhu Sun:
Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data.
Computational Methods for SNPs and Haplotype Inference 2002: 96-112 |
| 21 | EE | Ting Chen,
Dimitris N. Metaxas:
Integration of Gibbs Prior Models and Deformable Models for 3D Medical Image Segmentation.
ICPR (1) 2002: 719-722 |
| 20 | EE | Minghua Deng,
Shipra Mehta,
Fengzhu Sun,
Ting Chen:
Inferring domain-domain interactions from protein-protein interactions.
RECOMB 2002: 117-126 |
| 19 | EE | Ting Chen,
Q. H. Wu,
Reza Rahmani-Torkaman,
Jim Hughes:
A pseudo top-hat mathematical morphological approach to edge detection in dark regions.
Pattern Recognition 35(1): 199-210 (2002) |
| 2001 |
|---|
| 18 | EE | Celina Imielinska,
Dimitris N. Metaxas,
Jayaram K. Udupa,
Yinpeng Jin,
Ting Chen:
Hybrid Segmentation of Anatomical Data.
MICCAI 2001: 1048-1057 |
| 17 | EE | Abbas El Gamal,
Ting Chen:
A Graduate Level Course on Image Sensors and Digital Cameras.
MSE 2001: 102- |
| 16 | EE | Ting Chen:
Gene-finding via tandem mass spectrometry.
RECOMB 2001: 87-94 |
| 15 | EE | Ting Chen,
Jacob D. Jaffe,
George M. Church:
Algorithms for identifying protein cross-links via tandem mass spectrometry.
RECOMB 2001: 95-102 |
| 14 | EE | Ting Chen,
Ming-Yang Kao,
Matthew Tepel,
John Rush,
George M. Church:
A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry
CoRR cs.CE/0101016: (2001) |
| 13 | | Ting Chen,
Ming-Yang Kao,
Matthew Tepel,
John Rush,
George M. Church:
A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry.
Journal of Computational Biology 8(3): 325-337 (2001) |
| 12 | | Ting Chen,
Jacob D. Jaffe,
George M. Church:
Algorithms for Identifying Protein Cross-Links via Tandem Mass Spectrometry.
Journal of Computational Biology 8(6): 571-583 (2001) |
| 11 | | Ting Chen,
Vladimir Filkov,
Steven Skiena:
Identifying gene regulatory networks from experimental data.
Parallel Computing 27(1-2): 141-162 (2001) |
| 2000 |
|---|
| 10 | | Ting Chen,
Dimitris N. Metaxas:
Image Segmentation Based on the Integration of Markov Random Fields and Deformable Models.
MICCAI 2000: 256-265 |
| 9 | EE | Ting Chen,
Ming-Yang Kao,
Matthew Tepel,
John Rush,
George M. Church:
A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry.
SODA 2000: 389-398 |
| 8 | | Ting Chen,
Steven Skiena:
A case study in genome-level fragment assembly.
Bioinformatics 16(6): 494-500 (2000) |
| 1999 |
|---|
| 7 | EE | Ting Chen,
Ming-Yang Kao:
On the Informational Asymmetry between Upper and Lower Bounds for Ultrametric Evolutionary Trees.
ESA 1999: 248-256 |
| 6 | | Ethan L. Miller,
Dan Shen,
Junli Liu,
Charles K. Nicholas,
Ting Chen:
Techniques for Gigabyte-Scale N-gram Based Information Retrieval on Personal Computers.
PDPTA 1999: 1410-1416 |
| 5 | EE | Ting Chen,
Hongyu L. He,
George M. Church:
Modeling Gene Expression with Differential Equations.
Pacific Symposium on Biocomputing 1999: 29-40 |
| 4 | EE | Ting Chen,
Vladimir Filkov,
Steven Skiena:
Identifying gene regulatory networks from experimental data.
RECOMB 1999: 94-103 |
| 1997 |
|---|
| 3 | | Ting Chen,
Steven Skiena:
Trie-Based Data Structures for Sequence Assembly.
CPM 1997: 206-223 |
| 1996 |
|---|
| 2 | EE | Ting Chen,
Steven Skiena:
Sorting with Fixed-length Reversals.
Discrete Applied Mathematics 71(1-3): 269-295 (1996) |
| 1994 |
|---|
| 1 | | Ting Chen:
Artificial Neural Networks for Motion Analysis.
ICTAI 1994: 175-180 |
