Jianlin Cheng

	2009
15		Allison N. Tegge, Zheng Wang, Jesse Eickholt, Jianlin Cheng: NNcon: improved protein contact map prediction using 2D-recursive neural networks. Nucleic Acids Research 37(Web-Server-Issue): 515-518 (2009)
	2008
14		Jianlin Cheng, Zheng Wang, Gianluca Pollastri: A neural network approach to ordinal regression. IJCNN 2008: 1279-1284
13		Arlo Z. Randall, Jianlin Cheng, Michael J. Sweredoski, Pierre Baldi: TMBpro: secondary structure, beta-contact and tertiary structure prediction of transmembrane beta-barrel proteins. Bioinformatics 24(4): 513-520 (2008)
	2007
12		Jianyong Dai, Jianlin Cheng: HHMMVE: A Visual Editor for Profile Hidden Markov Model. BIOCOMP 2007: 591-597
11		Jianlin Cheng, Pierre Baldi: Improved residue contact prediction using support vector machines and a large feature set. BMC Bioinformatics 8: (2007)
10		Jianlin Cheng: A neural network approach to ordinal regression CoRR abs/0704.1028: (2007)
9		Jianlin Cheng: DOMAC: an accurate, hybrid protein domain prediction server. Nucleic Acids Research 35(Web-Server-Issue): 354-356 (2007)
	2006
8		Jianlin Cheng, Pierre Baldi: A machine learning information retrieval approach to protein fold recognition. Bioinformatics 22(12): 1456-1463 (2006)
7		Jianlin Cheng, Michael J. Sweredoski, Pierre Baldi: DOMpro: Protein Domain Prediction Using Profiles, Secondary Structure, Relative Solvent Accessibility, and Recursive Neural Networks. Data Min. Knowl. Discov. 13(1): 1-10 (2006)
6		Samuel A. Danziger, Sanjay Joshua Swamidass, Jue Zeng, Lawrence R. Dearth, Qiang Lu, Jonathan H. Chen, Jianlin Cheng, Vinh P. Hoang, Hiroto Saigo, Ray Luo, Pierre Baldi, Rainer K. Brachmann, Richard H. Lathrop: Functional Census of Mutation Sequence Spaces: The Example of p53 Cancer Rescue Mutants. IEEE/ACM Trans. Comput. Biology Bioinform. 3(2): 114-125 (2006)
	2005
5		Jianlin Cheng, Pierre Baldi: Three-stage prediction of protein ?-sheets by neural networks, alignments and graph algorithms. ISMB (Supplement of Bioinformatics) 2005: 75-84
4		Jianlin Cheng, Michael J. Sweredoski, Pierre Baldi: Accurate Prediction of Protein Disordered Regions by Mining Protein Structure Data. Data Min. Knowl. Discov. 11(3): 213-222 (2005)
3		Jianlin Cheng, Lucas Scharenbroich, Pierre Baldi, Eric Mjolsness: Sigmoid: A Software Infrastructure for Pathway Bioinformatics and Systems Biology. IEEE Intelligent Systems 20(3): 68-75 (2005)
2		Jianlin Cheng, Arlo Z. Randall, Michael J. Sweredoski, Pierre Baldi: SCRATCH: a protein structure and structural feature prediction server. Nucleic Acids Research 33(Web-Server-Issue): 72-76 (2005)
	2004
1		Pierre Baldi, Jianlin Cheng, Alessandro Vullo: Large-Scale Prediction of Disulphide Bond Connectivity. NIPS 2004

Coauthor Index

1	Pierre Baldi	[1] [2] [3] [4] [5] [6] [7] [8] [11] [13]
2	Rainer K. Brachmann	[6]
3	Jonathan H. Chen	[6]
4	Jianyong Dai	[12]
5	Samuel A. Danziger	[6]
6	Lawrence R. Dearth	[6]
7	Jesse Eickholt	[15]
8	Vinh P. Hoang	[6]
9	Richard H. Lathrop	[6]
10	Qiang Lu	[6]
11	Ray Luo	[6]
12	Eric Mjolsness	[3]
13	Gianluca Pollastri	[14]
14	Arlo Z. Randall	[2] [13]
15	Hiroto Saigo	[6]
16	Lucas Scharenbroich	[3]
17	Sanjay Joshua Swamidass	[6]
18	Michael J. Sweredoski	[2] [4] [7] [13]
19	Allison N. Tegge	[15]
20	Alessandro Vullo	[1]
21	Zheng Wang	[14] [15]
22	Jue Zeng	[6]

Colors in the list of coauthors