| 2009 | ||
|---|---|---|
| 6 | Bruno Contreras-Moreira, Bernardo Sachman-Ruiz, Iraís Figueroa-Palacios, Pablo Vinuesa: primers4clades: a web server that uses phylogenetic trees to design lineage-specific PCR primers for metagenomic and diversity studies. Nucleic Acids Research 37(Web-Server-Issue): 95-100 (2009) | |
| 2008 | ||
| 5 | Vladimir Espinosa Angarica, Abel González Pérez, Ana Tereza R. Vasconcelos, Julio Collado-Vides, Bruno Contreras-Moreira: Prediction of TF target sites based on atomistic models of protein-DNA complexes. BMC Bioinformatics 9: (2008) | |
| 4 | Socorro Gama-Castro, Verónica Jiménez-Jacinto, Martín Peralta-Gil, Alberto Santos-Zavaleta, Mónica I. Peñaloza-Spínola, Bruno Contreras-Moreira, Juan Segura-Salazar, Luis Muñiz-Rascado, Irma Martínez-Flores, Heladia Salgado, César Bonavides-Martínez, Cei Abreu-Goodger, Carlos Rodríguez Penagos, Juan Miranda-Ríos, Enrique Morett, Enrique Merino, Araceli M. Huerta, Luis Treviño-Quintanilla, Julio Collado-Vides: RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Nucleic Acids Research 36(Database-Issue): 120-124 (2008) | |
| 2007 | ||
| 3 | Bruno Contreras-Moreira, Pierre-Alain Branger, Julio Collado-Vides: TFmodeller: comparative modelling of protein-DNA complexes. Bioinformatics 23(13): 1694-1696 (2007) | |
| 2006 | ||
| 2 | Bruno Contreras-Moreira, Julio Collado-Vides: Comparative footprinting of DNA-binding proteins. ISMB (Supplement of Bioinformatics) 2006: 74-80 | |
| 2002 | ||
| 1 | Bruno Contreras-Moreira, Paul A. Bates: Domain Fishing: a first step in protein comparative modelling. Bioinformatics 18(8): 1141-1142 (2002) | |