 | 2009 |
| 19 |  | Oscar M. Rueda,
Ramón Díaz-Uriarte:
RJaCGH: Bayesian analysis of aCGH arrays for detecting copy number changes and recurrent regions.
Bioinformatics 25(15): 1959-1960 (2009) |
| 18 |  | Edward R. Morrissey,
Ramón Díaz-Uriarte:
Pomelo II: finding differentially expressed genes.
Nucleic Acids Research 37(Web-Server-Issue): 581-586 (2009) |
| 2008 |
| 17 |  | Ramón Díaz-Uriarte:
SignS: a parallelized, open-source, freely available, web-based tool for gene selection and molecular signatures for survival and censored data.
BMC Bioinformatics 9: (2008) |
| 16 |  | Andreu Alibés,
Andrés Cañada,
Ramón Díaz-Uriarte:
PaLS: filtering common literature, biological terms and pathway information.
Nucleic Acids Research 36(Web-Server-Issue): 364-367 (2008) |
| 2007 |
| 15 |  | Oscar M. Rueda,
Ramón Díaz-Uriarte:
A response to Yu et al. "A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array", BMC Bioinformatics 2007, 8: 145.
BMC Bioinformatics 8: (2007) |
| 14 |  | Ramón Díaz-Uriarte:
GeneSrF and varSelRF: a web-based tool and R package for gene selection and classification using random forest.
BMC Bioinformatics 8: (2007) |
| 13 |  | Andreu Alibés,
Patricio Yankilevich,
Andrés Cañada,
Ramón Díaz-Uriarte:
IDconverter and IDClight: Conversion and annotation of gene and protein IDs.
BMC Bioinformatics 8: (2007) |
| 12 |  | Ramón Díaz-Uriarte,
Andreu Alibés,
Edward R. Morrissey,
Andrés Cañada,
Oscar M. Rueda,
Mariana L. Neves:
Asterias: integrated analysis of expression and aCGH data using an open-source, web-based, parallelized software suite.
Nucleic Acids Research 35(Web-Server-Issue): 75-80 (2007) |
| 2006 |
| 11 |  | Ramón Díaz-Uriarte,
Sara Alvarez de Andrés:
Gene selection and classification of microarray data using random forest.
BMC Bioinformatics 7: 3 (2006) |
| 2005 |
| 10 |  | Fátima Al-Shahrour,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information.
Bioinformatics 21(13): 2988-2993 (2005) |
| 9 |  | Juan M. Vaquerizas,
Lucía Conde,
Patricio Yankilevich,
Amaya Cabezón,
Pablo Minguez,
Ramón Díaz-Uriarte,
Fátima Al-Shahrour,
Javier Herrero,
Joaquín Dopazo:
GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data.
Nucleic Acids Research 33(Web-Server-Issue): 616-620 (2005) |
| 2004 |
| 8 |  | Javier Herrero,
Juan M. Vaquerizas,
Fátima Al-Shahrour,
Lucía Conde,
Álvaro Mateos,
Javier Santoyo,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
New Challenges in Gene Expression Data Analysis and the Extended GEPAS.
Spanish Bioinformatics Conference 2004: 1-5 |
| 7 |  | Ramón Díaz-Uriarte,
David Casado:
Can we Find Molecular Signatures from Gene Expression Data?
Spanish Bioinformatics Conference 2004: 173-178 |
| 6 |  | Ramón Díaz-Uriarte:
Variable Selection from Random Forests: Application to Gene Expression Data.
Spanish Bioinformatics Conference 2004: 47-52 |
| 5 |  | Juan M. Vaquerizas,
Joaquín Dopazo,
Ramón Díaz-Uriarte:
DNMAD: web-based diagnosis and normalization for microarray data.
Bioinformatics 20(18): 3656-3658 (2004) |
| 4 |  | Fátima Al-Shahrour,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes.
Bioinformatics 20(4): (2004) |
| 3 |  | Javier Herrero,
Juan M. Vaquerizas,
Fátima Al-Shahrour,
Lucía Conde,
Álvaro Mateos,
Javier Santoyo,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
New challenges in gene expression data analysis and the extended GEPAS.
Nucleic Acids Research 32(Web-Server-Issue): 485-491 (2004) |
| 2003 |
| 2 |  | Javier Herrero,
Ramón Díaz-Uriarte,
Joaquín Dopazo:
Gene expression data preprocessing.
Bioinformatics 19(5): 655-656 (2003) |
| 1 |  | Javier Herrero,
Fátima Al-Shahrour,
Ramón Díaz-Uriarte,
Álvaro Mateos,
Juan M. Vaquerizas,
Javier Santoyo,
Joaquín Dopazo:
GEPAS: a web-based resource for microarray gene expression data analysis.
Nucleic Acids Research 31(13): 3461-3467 (2003) |