 | 2009 |
| 9 |  | Erik Kristiansson,
Philip Hugenholtz,
Daniel Dalevi:
ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes.
Bioinformatics 25(20): 2737-2738 (2009) |
| 2008 |
| 8 |  | Daniel Dalevi,
Natalia Ivanova,
Konstantinos Mavrommatis,
Sean D. Hooper,
Ernest Szeto,
Philip Hugenholtz,
Nikos Kyrpides,
Victor M. Markowitz:
Annotation of metagenome short reads using proxygenes.
ECCB 2008: 7-13 |
| 7 |  | Daniel Dalevi,
Niklas Eriksen:
Expected gene-order distances and model selection in bacteria.
Bioinformatics 24(11): 1332-1338 (2008) |
| 6 |  | Victor M. Markowitz,
Natalia Ivanova,
Ernest Szeto,
Krishna Palaniappan,
Ken Chu,
Daniel Dalevi,
I-Min A. Chen,
Yuri Grechkin,
Inna Dubchak,
Iain Anderson,
Athanasios Lykidis,
Konstantinos Mavrommatis,
Philip Hugenholtz,
Nikos Kyrpides:
IMG/M: a data management and analysis system for metagenomes.
Nucleic Acids Research 36(Database-Issue): 534-538 (2008) |
| 2007 |
| 5 |  | Daniel Dalevi,
Todd Z. DeSantis,
Jakob Fredslund,
Gary L. Andersen,
Victor M. Markowitz,
Philip Hugenholtz:
Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool.
BMC Bioinformatics 8: (2007) |
| 4 |  | Marija Cvijovic,
Daniel Dalevi,
Elizabeth Bilsland,
Graham J. L. Kemp,
Per Sunnerhagen:
Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.
BMC Bioinformatics 8: (2007) |
| 2006 |
| 3 |  | Daniel Dalevi,
Devdatt P. Dubhashi,
Malte Hermansson:
Bayesian classifiers for detecting HGT using fixed and variable order markov models of genomic signatures.
Bioinformatics 22(5): 517-522 (2006) |
| 2005 |
| 2 |  | Daniel Dalevi,
Devdatt P. Dubhashi:
The Peres-Shields Order Estimator for Fixed and Variable Length Markov Models with Applications to DNA Sequence Similarity.
WABI 2005: 291-302 |
| 2004 |
| 1 |  | Jim Samuelsson,
Daniel Dalevi,
Fredrik Levander,
Thorsteinn S. Rögnvaldsson:
Modular, scriptable and automated analysis tools for high-throughput peptide mass fingerprinting.
Bioinformatics 20(18): 3628-3635 (2004) |