Drena Dobbs

	2009
21		Cornelia Caragea, Jivko Sinapov, Drena Dobbs, Vasant Honavar: Mixture of experts models to exploit global sequence similarity on biomolecular sequence labeling. BMC Bioinformatics 10(S-4): (2009)
20		Fengli Fu, Jeffry D. Sander, Morgan Maeder, Stacey Thibodeau-Beganny, J. Keith Joung, Drena Dobbs, Leslie L. Miller, Daniel F. Voytas: Zinc Finger Database (ZiFDB): a repository for information on C2H2 zinc fingers and engineered zinc-finger arrays. Nucleic Acids Research 37(Database-Issue): 279-283 (2009)
	2008
19		Jae-Hyung Lee, Michael Hamilton, Colin Gleeson, Cornelia Caragea, Peter Zaback, Jeffry D. Sander, Xue Li, Feihong Wu, Michael Terribilini, Vasant Honavar, Drena Dobbs: Striking Similarities in Diverse Telomerase Proteins Revealed by Combining Structure Prediction and Machine Learning Approaches. Pacific Symposium on Biocomputing 2008: 501-512
	2007
18		Cornelia Caragea, Jivko Sinapov, Vasant Honavar, Drena Dobbs: Assessing the Performance of Macromolecular Sequence Classifiers. BIBE 2007: 320-326
17		Feihong Wu, Fadi Towfic, Drena Dobbs, Vasant Honavar: Analysis of Protein Protein Dimeric Interfaces. BIBM 2007: 35
16		Carson M. Andorf, Drena Dobbs, Vasant Honavar: Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach. BMC Bioinformatics 8: (2007)
15		Cornelia Caragea, Jivko Sinapov, Adrian Silvescu, Drena Dobbs, Vasant Honavar: Glycosylation site prediction using ensembles of Support Vector Machine classifiers. BMC Bioinformatics 8: (2007)
14		Michael Terribilini, Jeffry D. Sander, Jae-Hyung Lee, Peter Zaback, Robert L. Jernigan, Vasant Honavar, Drena Dobbs: RNABindR: a server for analyzing and predicting RNA-binding sites in proteins. Nucleic Acids Research 35(Web-Server-Issue): 578-584 (2007)
13		Jeffry D. Sander, Peter Zaback, J. Keith Joung, Daniel F. Voytas, Drena Dobbs: Zinc Finger Targeter (ZiFiT): an engineered zinc finger/target site design tool. Nucleic Acids Research 35(Web-Server-Issue): 599-605 (2007)
	2006
12		Changhui Yan, Michael Terribilini, Feihong Wu, Robert L. Jernigan, Drena Dobbs, Vasant Honavar: Predicting DNA-binding sites of proteins from amino acid sequence. BMC Bioinformatics 7: 262 (2006)
	2005
11		Doina Caragea, Jie Bao, Jyotishman Pathak, Adrian Silvescu, Carson M. Andorf, Drena Dobbs, Vasant Honavar: Information Integration from Semantically Heterogeneous Biological Data Sources. DEXA Workshops 2005: 580-584
10		Doina Caragea, Jyotishman Pathak, Jie Bao, Adrian Silvescu, Carson M. Andorf, Drena Dobbs, Vasant Honavar: Information Integration and Knowledge Acquisition from Semantically Heterogeneous Biological Data Sources. DILS 2005: 175-190
9		Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Susan Carpenter, Vasant Honavar, Drena Dobbs: Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and Rna Binding Sites in Rev Proteins of Hiv-1 and Eiav Agree with Experimental Data CoRR abs/cs/0511075: (2005)
	2004
8		Changhui Yan, Drena Dobbs, Vasant Honavar: A two-stage classifier for identification of protein-protein interface residues. ISMB/ECCB (Supplement of Bioinformatics) 2004: 371-378
7		Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jernigan, Changhui Yan, Vasant Honavar, Kai-Ming Ho, Cai-Zhuang Wang, Yungok Ihm, Haibo Cao, Xun Gu, Drena Dobbs: Predicting binding sites of hydrolase-inhibitor complexes by combining several methods. BMC Bioinformatics 5: 205 (2004)
6		Changhui Yan, Vasant Honavar, Drena Dobbs: Identification of interface residues in protease-inhibitor and antigen-antibody complexes: a support vector machine approach. Neural Computing and Applications 13(2): 123-129 (2004)
	2003
5		Xiangyun Wang, Diane Schroeder, Drena Dobbs, Vasant Honavar: Automated data-driven discovery of motif-based protein function classifiers. Inf. Sci. 155(1-2): 1-18 (2003)
	2002
4		Xiangyun Wang, Diane Schroeder, Drena Dobbs, Vasant Honavar: Data-Driven Discovery of Protein Function Classifiers: Decision Trees Based on MEME Motifs outperform PROSITE Patterns and Profiles on Peptidase Families. JCIS 2002: 1193-1199
3		Carson M. Andorf, Drena Dobbs, Vasant Honavar: Discovering Protein Function Classification Rules from Reduced Alphabet Representations of Protein Sequences. JCIS 2002: 1200-1206
	1999
2		Jihoon Yang, Rajesh Parekh, Vasant Honavar, Drena Dobbs: Data-Driven Theory Refinement Using KBDistAl. IDA 1999: 331-342
	1994
1		Drena Dobbs, Wen-Ling Shaiu, Robert M. Benbow: Modular sequence elements associated with origin regions in eukaryotic chromosomal DNA. Nucleic Acids Research 22(13): 2479-2489 (1994)

Coauthor Index

1	Carson M. Andorf	[3] [10] [11] [16]
2	Jie Bao	[10] [11]
3	Robert M. Benbow	[1]
4	Haibo Cao	[7]
5	Cornelia Caragea	[15] [18] [19] [21]
6	Doina Caragea	[10] [11]
7	Susan Carpenter	[9]
8	Fengli Fu	[20]
9	Colin Gleeson	[19]
10	Xun Gu	[7]
11	Michael Hamilton	[19]
12	Kai-Ming Ho	[7]
13	Vasant Honavar	[2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [14] [15] [16] [17] [18] [19] [21]
14	Yungok Ihm	[7]
15	Robert L. Jernigan	[7] [9] [12] [14]
16	J. Keith Joung	[13] [20]
17	Andrzej Kloczkowski	[7]
18	Jae-Hyung Lee	[9] [14] [19]
19	Xue Li	[19]
20	Morgan Maeder	[20]
21	Leslie L. Miller (Les L. Miller, Les Miller)	[20]
22	Rajesh Parekh	[2]
23	Jyotishman Pathak	[10] [11]
24	Jeffry D. Sander	[13] [14] [19] [20]
25	Diane Schroeder	[4] [5]
26	Taner Z. Sen	[7]
27	Wen-Ling Shaiu	[1]
28	Adrian Silvescu	[10] [11] [15]
29	Jivko Sinapov	[15] [18] [21]
30	Michael Terribilini	[9] [12] [14] [19]
31	Stacey Thibodeau-Beganny	[20]
32	Fadi Towfic	[17]
33	Daniel F. Voytas	[13] [20]
34	Cai-Zhuang Wang	[7]
35	Xiangyun Wang	[4] [5]
36	Feihong Wu	[12] [17] [19]
37	Changhui Yan	[6] [7] [8] [9] [12]
38	Jihoon Yang	[2]
39	Peter Zaback	[13] [14] [19]

Colors in the list of coauthors