Bruce Randall Donald

	2012
85		Bruce Randall Donald: The Compass That Steered Robotics. Logic and Program Semantics 2012: 50-65
84		Pablo Gainza, Kyle E. Roberts, Bruce Randall Donald: Protein Design Using Continuous Rotamers. PLoS Computational Biology 8(1): (2012)
83		Kyle E. Roberts, Patrick R. Cushing, Prisca Boisguerin, Dean R. Madden, Bruce Randall Donald: Computational Design of a PDZ Domain Peptide Inhibitor that Rescues CFTR Activity. PLoS Computational Biology 8(4): (2012)
	2011
82		Jeffrey W. Martin, Anthony K. Yan, Chris Bailey-Kellogg, Pei Zhou, Bruce Randall Donald: A Geometric Arrangement Algorithm for Structure Determination of Symmetric Protein Homo-oligomers from NOEs and RDCs. RECOMB 2011: 222-237
81		Kyle E. Roberts, Patrick R. Cushing, Prisca Boisguerin, Dean R. Madden, Bruce Randall Donald: Design of Protein-Protein Interactions with a Novel Ensemble-Based Scoring Algorithm. RECOMB 2011: 361-376
80		Chittaranjan Tripathy, Jianyang Zeng, Pei Zhou, Bruce Randall Donald: Protein Loop Closure Using Orientational Restraints from NMR Data. RECOMB 2011: 483-498
79		Jianyang Zeng, Kyle E. Roberts, Pei Zhou, Bruce Randall Donald: A Bayesian Approach for Determining Protein Side-Chain Rotamer Conformations Using Unassigned NOE Data. RECOMB 2011: 563-578
78		Mehmet Serkan Apaydin, Bülent Çatay, Nicholas Patrick, Bruce Randall Donald: NVR-BIP: Nuclear Vector Replacement using Binary Integer Programming for NMR Structure-Based Assignments. Comput. J. 54(5): 708-716 (2011)
	2010
77		Mehmet Çagri Çalpur, Hakan Erdogan, Bülent Çatay, Bruce Randall Donald, Mehmet Serkan Apaydin: Developing a Scoring Function for NMR Structure-based Assignments using Machine Learning. ISCIS 2010: 87-90
76		Jianyang Zeng, Pei Zhou, Bruce Randall Donald: A Markov Random Field Framework for Protein Side-Chain Resonance Assignment. RECOMB 2010: 550-570
75		Anna Yershova, Chittaranjan Tripathy, Pei Zhou, Bruce Randall Donald: Algorithms and Analytic Solutions Using Sparse Residual Dipolar Couplings for High-Resolution Automated Protein Backbone Structure Determination by NMR. WAFR 2010: 355-372
	2009
74		Mehmet Serkan Apaydin, Bülent Çatay, Nicholas Patrick, Bruce Randall Donald: NVR-BIP: Nuclear vector replacement using binary integer programming for NMR structure-based assignments. ISCIS 2009: 177-182
	2008
73		Ivelin Georgiev, Daniel Keedy, Jane S. Richardson, David C. Richardson, Bruce Randall Donald: Algorithm for backrub motions in protein design. ISMB 2008: 196-204
72		Bruce Randall Donald, Christopher G. Levey, Igor Paprotny, Daniela Rus: Simultaneous Control of Multiple MEMS Microrobots. WAFR 2008: 69-84
71		Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald: The minimized dead-end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles. Journal of Computational Chemistry 29(10): 1527-1542 (2008)
	2007
70		Ivelin Georgiev, Bruce Randall Donald: Dead-End Elimination with Backbone Flexibility. ISMB/ECCB (Supplement of Bioinformatics) 2007: 185-194
	2006
69		Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald: Improved Pruning algorithms and Divide-and-Conquer strategies for Dead-End Elimination, with application to protein design. ISMB (Supplement of Bioinformatics) 2006: 174-183
68		Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald: A Novel Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles. RECOMB 2006: 530-545
67		Shobha Potluri, Anthony K. Yan, James J. Chou, Bruce Randall Donald, Chris Bailey-Kellogg: Extended Abstract: Structure Determination of Symmetric Protein Complexes by a Complete Search of Symmetry Configuration Space Using NMR Distance Restraints. WAFR 2006: 335-340
66		Lincong Wang, Ramgopal R. Mettu, Bruce Randall Donald: A Polynomial-Time Algorithm for De Novo Protein Backbone Structure Determination from Nuclear Magnetic Resonance Data. Journal of Computational Biology 13(7): 1267-1288 (2006)
	2005
65		Lincong Wang, Bruce Randall Donald: An Efficient and Accurate Algorithm for Assigning Nuclear Overhauser Effect Restraints Using a Rotamer Library Ensemble and Residual Dipolar Couplings. CSB 2005: 189-202
64		Lincong Wang, Ramgopal R. Mettu, Bruce Randall Donald: An Algebraic Geometry Approach to Protein Structure Determination from NMR Data. CSB 2005: 235-246
63		Ramgopal R. Mettu, Ryan H. Lilien, Bruce Randall Donald: High-throughput inference of protein-protein interfaces from unassigned NMR data. ISMB (Supplement of Bioinformatics) 2005: 292-301
62		Bruce Randall Donald, Christopher G. Levey, Craig D. McGray, Igor Paprotny, Daniela Rus: A Steerable, Untethered, 250 × 60µm MEMS Mobile Micro-Robot. ISRR 2005: 337-356
61		Bruce Randall Donald: Computational and physical modeling challenges in structural molecular biology and proteomics. Symposium on Solid and Physical Modeling 2005: 7
60		Anthony K. Yan, Christopher James Langmead, Bruce Randall Donald: A Probability-Based Similarity Measure for Saupe Alignment Tensors with Applications to Residual Dipolar Couplings in NMR Structural Biology. I. J. Robotic Res. 24(2-3): 165-182 (2005)
59		Ryan H. Lilien, Brian W. Stevens, Amy C. Anderson, Bruce Randall Donald: A Novel Ensemble-Based Scoring and Search Algorithm for Protein Redesign and Its Application to Modify the Substrate Specificity of the Gramicidin Synthetase A Phenylalanine Adenylation Enzyme. Journal of Computational Biology 12(6): 740-761 (2005)
	2004
58		Christopher James Langmead, Bruce Randall Donald: High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment. CSB 2004: 278-289
57		Lincong Wang, Bruce Randall Donald: Analysis of a Systematic Search-Based Algorithm for Determining Protein Backbone Structure from a Minimum Number of Residual Dipolar Couplings. CSB 2004: 319-330
56		Ryan H. Lilien, Brian W. Stevens, Amy C. Anderson, Bruce Randall Donald: A novel ensemble-based scoring and search algorithm for protein redesign, and its application to modify the substrate specificity of the gramicidin synthetase a phenylalanine adenylation enzyme. RECOMB 2004: 46-57
55		Christopher James Langmead, Anthony K. Yan, Ryan H. Lilien, Lincong Wang, Bruce Randall Donald: A Polynomial-Time Nuclear Vector Replacement Algorithm for Automated NMR Resonance Assignments. Journal of Computational Biology 11(2/3): 277-298 (2004)
	2003
54		Christopher James Langmead, Bruce Randall Donald: 3D Structural Homology Detection via Unassigned Residual Dipolar Couplings. CSB 2003: 209-219
53		Lincong Wang, Ramgopal R. Mettu, Ryan H. Lilien, Bruce Randall Donald: An Exact Algorithm For Determining Protein Backbone Structure From NH Residual Dipolar Couplings. CSB 2003: 611-612
52		Bruce Randall Donald, Christopher G. Levey, Craig D. McGray, Daniela Rus, Mike Sinclair: UntetheredMicro-Actuators for Autonomous Micro-robot Locomotion: Design, Fabrication, Control, and Performance. ISRR 2003: 502-516
51		Christopher James Langmead, Anthony K. Yan, Ryan H. Lilien, Lincong Wang, Bruce Randall Donald: Large a polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments. RECOMB 2003: 176-187
50		Christopher James Langmead, Anthony K. Yan, C. Robertson McClung, Bruce Randall Donald: Phase-Independent Rhythmic Analysis of Genome-Wide Expression Patterns. Journal of Computational Biology 10(3/4): 521-536 (2003)
49		Ryan H. Lilien, Hany Farid, Bruce Randall Donald: Probabilistic Disease Classification of Expression-Dependent Proteomic Data from Mass Spectrometry of Human Serum. Journal of Computational Biology 10(6): 925-946 (2003)
	2002
48		Christopher James Langmead, C. Robertson McClung, Bruce Randall Donald: A Maximum Entropy Algorithm for Rhythmic Analysis of Genome-Wide Expression Patterns. CSB 2002: 237-245
47		Christopher James Langmead, Anthony K. Yan, C. Robertson McClung, Bruce Randall Donald: Phase-independent rhythmic analysis of genome-wide expression patterns. RECOMB 2002: 205-215
46		Bruce Randall Donald, Kevin M. Lynch, Daniela Rus: Guest Editors' Introduction to the Special Issue on Algorithmic Foundations of Robotics. I. J. Robotic Res. 21(3): 177-178 (2002)
	2001
45		Bruce Randall Donald, Christopher Bailey-Kellogg, Jack Kelley, Ryan H. Lilien: Physical Geometric Algorithms for Structural Molecular Biology. ICRA 2001: 940-947
44		Christopher James Langmead, Bruce Randall Donald: Extracting structural information using time-frequency analysis of protein NMR data. RECOMB 2001: 164-175
43		Christopher Bailey-Kellogg, John J. Kelley, Clifford Stein, Bruce Randall Donald: Reducing Mass Degeneracy in SAR by MS by Stable Isotopic Labeling. Journal of Computational Biology 8(1): 19-36 (2001)
	2000
42		John W. Suh, R. Bruce Darling, Karl-Friedrich Böhringer, Bruce Randall Donald, Henry Baltes, Gregory T. A. Kovacs: Fully Programmable MEMS Ciliary Actuator Arrays for Micromanipulation Tasks. ICRA 2000: 1101-1108
41		Bruce Randall Donald, Frederick Henle: Using Haptic Vector Fields for Animation Motion Control. ICRA 2000: 3435-3442
40		Jon Howell, Bruce Randall Donald: Practical Mobile Robot Self-Localization. ICRA 2000: 3485-3492
39		Bruce Randall Donald, Larry Gariepy, Daniela Rus: Distributed Manipulation of Multiple Objects using Ropes. ICRA 2000: 450-457
38		Christopher Bailey-Kellogg, John J. Kelley, Clifford Stein, Bruce Randall Donald: Reducing Mass Degeneracy in SAR by MS by Stable Isotopic Labeling. ISMB 2000: 13-24
37		Christopher Bailey-Kellogg, Alik Widge, John J. Kelley, Marcelo J. Berardi, John H. Bushweller, Bruce Randall Donald: The NOESY jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data. RECOMB 2000: 33-44
36		Tom Ngo, Doug Cutrell, Jenny Dana, Bruce Randall Donald, Lorie Loeb, Shunhui Zhu: Accessible animation and customizable graphics via simplicial configuration modeling. SIGGRAPH 2000: 403-410
35		Amy J. Briggs, Bruce Randall Donald: Visibility-Based Planning of Sensor Control Strategies. Algorithmica 26(3-4): 364-388 (2000)
34		Karl-Friedrich Böhringer, Vivek Bhatt, Bruce Randall Donald, Kenneth Y. Goldberg: Algorithms for Sensorless Manipulation Using a Vibrating Surface. Algorithmica 26(3-4): 389-429 (2000)
33		R. G. Brown, Bruce Randall Donald: Mobile Robot Self-Localization without Explicit Landmarks. Algorithmica 26(3-4): 515-559 (2000)
32		Karl-Friedrich Böhringer, Bruce Randall Donald, Lydia E. Kavraki, Florent Lamiraux: Part orientation with one or two stable equilibria using programmable force fields. IEEE Transactions on Robotics 16(2): 157-170 (2000)
	1999
31		Bruce Randall Donald, Larry Gariepy, Daniela Rus: Experiments in Constrained Prehensile Manipulation: Distributed Manipulation with Ropes. ISER 1999: 25-36
30		Karl-Friedrich Böhringer, Bruce Randall Donald, Dan Halperin: On the Area Bisectors of a Polygon. Discrete & Computational Geometry 22(2): 269-285 (1999)
29		Karl-Friedrich Böhringer, Bruce Randall Donald, Noel C. MacDonald: Programmable Force Fields for Distributed Manipulation, with Applications to MEMS Actuator Arrays and Vibratory Parts Feeders. I. J. Robotic Res. 18(2): 168-200 (1999)
	1997
28		Karl-Friedrich Böhringer, Bruce Randall Donald, Dan Halperin: The Area Bisectors of a Polygon and Force Equilibria in Programmable Vector Fields. Symposium on Computational Geometry 1997: 457-459
27		Bruce Randall Donald, James Jennings, Daniela Rus: Information Invariants for Distributed Manipulation. I. J. Robotic Res. 16(5): 673-702 (1997)
26		Bruce Randall Donald, James Jennings, Daniela Rus: Minimalism Distribution Supermodularity. J. Exp. Theor. Artif. Intell. 9(2-3): 293-321 (1997)
	1995
25		Karl-Friedrich Böhringer, Russell Brown, Bruce Randall Donald, James Jennings, Daniela Rus: Distributed Robotic Manipulation: Experiments in Minimalism. ISER 1995: 11-25
24		Bruce Randall Donald, Patrick G. Xavier: Provably Good Approximation Algorithms for Optimal Kinodynamic Planning: Robots with Decoupled Dynamics Bounds. Algorithmica 14(6): 443-479 (1995)
23		Bruce Randall Donald, Patrick G. Xavier: Provably Good Approximation Algorithms for Optimal Kinodynamic Planning for Cartesian Robots and Open-Chain Manipulators. Algorithmica 14(6): 480-530 (1995)
22		Bruce Randall Donald: On Information Invariants in Robotics. Artif. Intell. 72(1-2): 217-304 (1995)
	1994
21		Amy J. Briggs, Bruce Randall Donald: Automatic Sensor Configuration for Task-Directed Planning. ICRA 1994: 1345-1350
20		Bruce Randall Donald, James Jennings, Daniela Rus: Analyzing Teams of Cooperating Mobile Robots. ICRA 1994: 1896-1903
19		Karl-Friedrich Böhringer, Bruce Randall Donald, Robert Mihailovich, Noel C. MacDonald: Sensorless Manipulation Using Massively Parallel Microfabricated Actuator Arrays. ICRA 1994: 826-833
	1993
18		Bruce Randall Donald: Information Invariants in Robotics: Part I - State, Communication, and Side-Effects. ICRA (3) 1993: 276-283
17		Bruce Randall Donald: Information Invariants in Robotics: Part II - Sensors and Computation. ICRA (3) 1993: 284-290
16		Bruce Randall Donald: Special Issue on Computational Robotics: The Geometric Theory of Manipulation, Planning, and Control. Algorithmica 10(2-4): 91-101 (1993)
15		Bruce Randall Donald, Patrick G. Xavier, John F. Canny, John H. Reif: Kinodynamic Motion Planning. J. ACM 40(5): 1048-1066 (1993)
	1992
14		John F. Canny, Bruce Randall Donald, Eugene K. Ressler: A Rational Rotation Method for Robust Geometric Algorithms. Symposium on Computational Geometry 1992: 251-260
13		Bruce Randall Donald, James Jennings, Russell Brown: Constructive recognizability for task-directed robot programming. Robotics and Autonomous Systems 9(1-2): 41-74 (1992)
	1991
12		Bruce Randall Donald, Davied Renpan Chang: On the Complexity of Computing the Homology Type of a Triangulation FOCS 1991: 650-661
	1990
11		Jed Lengyel, Mark Reichert, Bruce Randall Donald, Donald P. Greenberg: Real-time robot motion planning using rasterizing computer graphics hardware. SIGGRAPH 1990: 327-335
10		Bruce Randall Donald, Patrick G. Xavier: Provably Good Approximation Algorithms for Optimal Kinodynamic Planning for Cartesian Robots and Open Chain Manipulators. Symposium on Computational Geometry 1990: 290-300
9		Bruce Randall Donald: The Complexity of Planar Compliant Motion Planning Under Uncertainty. Algorithmica 5(3): 353-382 (1990)
8		Bruce Randall Donald: Planning Multi-Step Error Detection and Recovery Strategies. I. J. Robotic Res. 9(1): 3-60 (1990)
	1989
7		Bruce Randall Donald: Error Detection and Recovery in Robotics Springer 1989
	1988
6		John F. Canny, Bruce Randall Donald, John H. Reif, Patrick G. Xavier: On the Complexity of Kinodynamic Planning FOCS 1988: 306-316
5		Bruce Randall Donald: The Complexity of Planar Compliant Motion Planning Under Uncertainty. Symposium on Computational Geometry 1988: 309-318
4		Bruce Randall Donald: A Geometric Approach to Error Detection and Recovery for Robot Motion Planning with Uncertainty. Artif. Intell. 37(1-3): 223-271 (1988)
3		John F. Canny, Bruce Randall Donald: Simplified Voronoi Diagrams. Discrete & Computational Geometry 3: 219-236 (1988)
	1987
2		John F. Canny, Bruce Randall Donald: Simplified Voronoi Diagrams. Symposium on Computational Geometry 1987: 153-161
1		Bruce Randall Donald: A Search Algorithm for Motion Planning with Six Degrees of Freedom. Artif. Intell. 31(3): 295-353 (1987)

Coauthor Index

1	Amy C. Anderson	[56] [59]
2	Mehmet Serkan Apaydin	[74] [77] [78]
3	Chris Bailey-Kellogg (Christopher Bailey-Kellogg)	[37] [38] [43] [45] [67] [82]
4	Henry Baltes	[42]
5	Marcelo J. Berardi	[37]
6	Vivek Bhatt	[34]
7	Karl-Friedrich Böhringer	[19] [25] [28] [29] [30] [32] [34] [42]
8	Prisca Boisguerin	[81] [83]
9	Amy J. Briggs	[21] [35]
10	R. G. Brown	[33]
11	Russell Brown	[13] [25]
12	John H. Bushweller	[37]
13	Mehmet Çagri Çalpur	[77]
14	John F. Canny (John Canny)	[2] [3] [6] [14] [15]
15	Bülent Çatay	[74] [77] [78]
16	Davied Renpan Chang	[12]
17	James J. Chou	[67]
18	Patrick R. Cushing	[81] [83]
19	Doug Cutrell	[36]
20	Jenny Dana	[36]
21	R. Bruce Darling	[42]
22	Hakan Erdogan	[77]
23	Hany Farid	[49]
24	Pablo Gainza	[84]
25	Larry Gariepy	[31] [39]
26	Ivelin Georgiev	[68] [69] [70] [71] [73]
27	Kenneth Y. Goldberg	[34]
28	Donald P. Greenberg	[11]
29	Dan Halperin	[28] [30]
30	Frederick Henle	[41]
31	Jon Howell	[40]
32	James Jennings	[13] [20] [25] [26] [27]
33	Lydia E. Kavraki	[32]
34	Daniel Keedy	[73]
35	Jack Kelley	[45]
36	John J. Kelley	[37] [38] [43]
37	Gregory T. A. Kovacs	[42]
38	Florent Lamiraux	[32]
39	Christopher James Langmead	[44] [47] [48] [50] [51] [54] [55] [58] [60]
40	Jed Lengyel (Jerome Edward Lengyel)	[11]
41	Christopher G. Levey	[52] [62] [72]
42	Ryan H. Lilien	[45] [49] [51] [53] [55] [56] [59] [63] [68] [69] [71]
43	Lorie Loeb	[36]
44	Kevin M. Lynch	[46]
45	Noel C. MacDonald	[19] [29]
46	Dean R. Madden	[81] [83]
47	Jeffrey W. Martin	[82]
48	C. Robertson McClung	[47] [48] [50]
49	Craig D. McGray	[52] [62]
50	Ramgopal R. Mettu	[53] [63] [64] [66]
51	Robert Mihailovich	[19]
52	Tom Ngo	[36]
53	Igor Paprotny	[62] [72]
54	Nicholas Patrick	[74] [78]
55	Shobha Potluri	[67]
56	Mark Reichert	[11]
57	John H. Reif	[6] [15]
58	Eugene K. Ressler	[14]
59	David C. Richardson	[73]
60	Jane S. Richardson	[73]
61	Kyle E. Roberts	[79] [81] [83] [84]
62	Daniela Rus	[20] [25] [26] [27] [31] [39] [46] [52] [62] [72]
63	Mike Sinclair	[52]
64	Clifford Stein	[38] [43]
65	Brian W. Stevens	[56] [59]
66	John W. Suh	[42]
67	Chittaranjan Tripathy	[75] [80]
68	Lincong Wang	[51] [53] [55] [57] [64] [65] [66]
69	Alik Widge	[37]
70	Patrick G. Xavier	[6] [10] [15] [23] [24]
71	Anthony K. Yan	[47] [50] [51] [55] [60] [67] [82]
72	Anna Yershova	[75]
73	Jianyang Zeng	[76] [79] [80]
74	Pei Zhou	[75] [76] [79] [80] [82]
75	Shunhui Zhu	[36]

Colors in the list of coauthors

Last update Fri May 25 01:42:58 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page