 | 2009 |
|---|
| 79 |       | Inmar E. Givoni,
Brendan J. Frey:
A Binary Variable Model for Affinity Propagation.
Neural Computation 21(6): 1589-1600 (2009) |
| 2008 |
|---|
| 78 | | Jim C. Huang,
Brendan J. Frey:
Structured ranking learning using cumulative distribution networks.
NIPS 2008: 697-704 |
| 77 | | Jim C. Huang,
Brendan J. Frey,
Quaid Morris:
Comparing Sequence and Expression for Predicting microRNA Targets Using GenMIR3.
Pacific Symposium on Biocomputing 2008: 52-63 |
| 76 | | Delbert Dueck,
Brendan J. Frey,
Nebojsa Jojic,
Vladimir Jojic,
Guri Giaever,
Andrew Emili,
Gabe Musso,
Robert Hegele:
Constructing Treatment Portfolios Using Affinity Propagation.
RECOMB 2008: 360-371 |
| 75 | | Jim C. Huang,
Brendan J. Frey:
Cumulative distribution networks and the derivative-sum-product algorithm.
UAI 2008: 290-297 |
| 74 | | Daniel Tarlow,
Richard S. Zemel,
Brendan J. Frey:
Flexible Priors for Exemplar-based Clustering.
UAI 2008: 537-545 |
| 73 | | Vincent Cheung,
Brendan J. Frey,
Nebojsa Jojic:
Video Epitomes.
International Journal of Computer Vision 76(2): 141-152 (2008) |
| 72 | | Anitha Kannan,
Nebojsa Jojic,
Brendan J. Frey:
Fast Transformation-Invariant Component Analysis.
International Journal of Computer Vision 77(1-3): 87-101 (2008) |
| 2007 |
|---|
| 71 | | Delbert Dueck,
Brendan J. Frey:
Non-metric affinity propagation for unsupervised image categorization.
ICCV 2007: 1-8 |
| 70 | | Anitha Kannan,
Andrew Emili,
Brendan J. Frey:
A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements.
RECOMB 2007: 325-338 |
| 69 | | Steven J. Rennie,
Parham Aarabi,
Brendan J. Frey:
Variational Probabilistic Speech Separation Using Microphone Arrays.
IEEE Transactions on Audio, Speech & Language Processing 15(1): 135-149 (2007) |
| 68 | | Jim C. Huang,
Quaid Morris,
Brendan J. Frey:
Bayesian Inference of MicroRNA Targets from Sequence and Expression Data.
Journal of Computational Biology 14(5): 550-563 (2007) |
| 2006 |
|---|
| 67 | | Jim C. Huang,
Quaid Morris,
Brendan J. Frey:
Detecting MicroRNA Targets by Linking Sequence, MicroRNA and Gene Expression Data.
RECOMB 2006: 114-129 |
| 66 | | Inmar E. Givoni,
Vincent Cheung,
Brendan J. Frey:
Matrix Tile Analysis.
UAI 2006 |
| 65 | | Ofer Shai,
Quaid Morris,
Benjamin J. Blencowe,
Brendan J. Frey:
Inferring global levels of alternative splicing isoforms using a generative model of microarray data.
Bioinformatics 22(5): 606-613 (2006) |
| 64 | | Lei Ying,
Zhi-Pei Liang,
David C. Munson,
Ralf Koetter,
Brendan J. Frey:
Unwrapping of MR phase images using a Markov random field model.
IEEE Trans. Med. Imaging 25(1): 128-136 (2006) |
| 63 | | Brendan J. Frey,
Quaid Morris,
Timothy R. Hughes:
GenRate: A Generative Model that Reveals Novel Transcripts in Genome-Tiling Microarray Data.
Journal of Computational Biology 13(2): 200-214 (2006) |
| 2005 |
|---|
| 62 | | Vincent Cheung,
Brendan J. Frey,
Nebojsa Jojic:
Video Epitomes.
CVPR (1) 2005: 42-49 |
| 61 | | Delbert Dueck,
Quaid Morris,
Brendan J. Frey:
Multi-way clustering of microarray data using probabilistic sparse matrix factorization.
ISMB (Supplement of Bioinformatics) 2005: 144-151 |
| 60 | | Jim C. Huang,
Quaid Morris,
Timothy R. Hughes,
Brendan J. Frey:
GenXHC: a probabilistic generative model for cross-hybridization compensation in high-density genome-wide microarray data.
ISMB (Supplement of Bioinformatics) 2005: 222-231 |
| 59 | | Brendan J. Frey,
Delbert Dueck:
Mixture Modeling by Affinity Propagation.
NIPS 2005 |
| 58 | | Nebojsa Jojic,
Vladimir Jojic,
Brendan J. Frey,
Christopher Meek,
David Heckerman:
Using epitomes to model genetic diversity: Rational design of HIV vaccines.
NIPS 2005 |
| 57 | | Brendan J. Frey,
Quaid Morris,
Wen Zhang,
Naveed Mohammad,
Timothy R. Hughes:
GenRate: A Generative Model That Finds and Scores New Genes and Exons in Genomic Microarray Data.
Pacific Symposium on Biocomputing 2005 |
| 56 | | Brendan J. Frey,
Quaid Morris,
Mark D. Robinson,
Timothy R. Hughes:
Finding Novel Transcripts in High-Resolution Genome-Wide Microarray Data Using the GenRate Model.
RECOMB 2005: 66-82 |
| 55 | | Brendan J. Frey,
Nebojsa Jojic:
A Comparison of Algorithms for Inference and Learning in Probabilistic Graphical Models.
IEEE Trans. Pattern Anal. Mach. Intell. 27(9): 1392-1416 (2005) |
| 2004 |
|---|
| 54 | | Rómer Rosales,
Kannan Achan,
Brendan J. Frey:
Learning to cluster using local neighborhood structure.
ICML 2004 |
| 53 | | Ofer Shai,
Brendan J. Frey,
Quaid Morris,
Qun Pan,
Christine Misquitta,
Benjamin J. Blencowe:
Probabilistic Inference of Alternative Splicing Events in Microarray Data.
NIPS 2004 |
| 52 | | Anitha Kannan,
Brendan J. Frey,
Nebojsa Jojic:
A Generative Model of Dense Optical Flow in Layers.
SCVMA 2004: 104-114 |
| 51 | | Yongyi Mao,
Frank R. Kschischang,
Brendan J. Frey:
Convolutional Factor Graphs as Probabilistic Models.
UAI 2004: 374-381 |
| 2003 |
|---|
| 50 | | Brendan J. Frey,
Nebojsa Jojic,
Anitha Kannan:
Learning Appearance and Transparency Manifolds of Occluded Objects in Layers.
CVPR (1) 2003: 45-52 |
| 49 | | Nebojsa Jojic,
Brendan J. Frey,
Anitha Kannan:
Epitomic analysis of appearance and shape.
ICCV 2003: 34-43 |
| 48 | | Rómer Rosales,
Kannan Achan,
Brendan J. Frey:
Unsupervised Image Translation.
ICCV 2003: 472-478 |
| 47 |  | Lei Ying,
David C. Munson,
Ralf Koetter,
Brendan J. Frey:
Multibaseline InSAR terrain elevation estimation: a dynamic programming approach.
ICIP (3) 2003: 157-160 |
| 46 | | Quaid Morris,
Brendan J. Frey:
Denoising and Untangling Graphs Using Degree Priors.
NIPS 2003 |
| 45 | | Kannan Achan,
Sam T. Roweis,
Brendan J. Frey:
Probabilistic Inference of Speech Signals from Phaseless Spectrograms.
NIPS 2003 |
| 44 | | Brendan J. Frey:
Extending Factor Graphs so as to Unify Directed and Undirected Graphical Models.
UAI 2003: 257-264 |
| 43 | | Rómer Rosales,
Brendan J. Frey:
Learning Generative Models of Similarity Matrices.
UAI 2003: 485-492 |
| 42 | | Brendan J. Frey,
Nebojsa Jojic:
Transformation-Invariant Clustering Using the EM Algorithm.
IEEE Trans. Pattern Anal. Mach. Intell. 25(1): 1-17 (2003) |
| 2002 |
|---|
| 41 | | Chris Pal,
Brendan J. Frey,
Nebojsa Jojic:
Learning Montages of Transformed Latent Images as Representations of Objects That Change in Appearance.
ECCV (4) 2002: 715-731 |
| 40 | | Lei Ying,
David C. Munson,
Ralf Koetter,
Brendan J. Frey:
An iterative dynamic programming approach to 2-D phase unwrapping.
ICIP (3) 2002: 469-471 |
| 39 | | Anitha Kannan,
Nebojsa Jojic,
Brendan J. Frey:
Fast Transformation-Invariant Factor Analysis.
NIPS 2002: 1263-1270 |
| 2001 |
|---|
| 38 | | Nebojsa Jojic,
Brendan J. Frey:
Learning Flexible Sprites in Video Layers.
CVPR (1) 2001: 199-206 |
| 37 | | Nemanja Petrovic,
Ira Cohen,
Brendan J. Frey,
Ralf Koetter,
Thomas S. Huang:
Enforcing Integrability for Surface Reconstruction Algorithms Using Belief Propagation in Graphical Models.
CVPR (1) 2001: 743-748 |
| 36 | | Nebojsa Jojic,
Patrice Simard,
Brendan J. Frey,
David Heckerman:
Separating Appearance from Deformation.
ICCV 2001: 288-294 |
| 35 | | Brendan J. Frey,
Trausti T. Kristjansson,
Li Deng,
Alex Acero:
ALGONQUIN - Learning Dynamic Noise Models From Noisy Speech for Robust Speech Recognition.
NIPS 2001: 1165-1171 |
| 34 | | Brendan J. Frey,
Nebojsa Jojic:
Fast, Large-Scale Transformation-Invariant Clustering.
NIPS 2001: 721-727 |
| 33 | | Brendan J. Frey,
Anitha Kannan,
Nebojsa Jojic:
Product Analysis: Learning to Model Observations as Products of Hidden Variables.
NIPS 2001: 729-735 |
| 32 | | Brendan J. Frey,
Ralf Koetter,
Nemanja Petrovic:
Very loopy belief propagation for unwrapping phase images.
NIPS 2001: 737-743 |
| 31 | | Kannan Achan,
Brendan J. Frey,
Ralf Koetter:
A Factorized Variational Technique for Phase Unwrapping in Markov Random Field.
UAI 2001: 1-6 |
| 30 | | Brendan J. Frey,
Ralf Koetter,
G. David Forney Jr.,
Frank R. Kschischang,
Robert J. McEliece,
Daniel A. Spielman:
Introduction to the special issue on codes on graphs and iterative algorithms.
IEEE Transactions on Information Theory 47(2): 493-497 (2001) |
| 29 | | Frank R. Kschischang,
Brendan J. Frey,
Hans-Andrea Loeliger:
Factor graphs and the sum-product algorithm.
IEEE Transactions on Information Theory 47(2): 498-519 (2001) |
| 28 | | Brendan J. Frey,
Ralf Koetter,
Alexander Vardy:
Signal-space characterization of iterative decoding.
IEEE Transactions on Information Theory 47(2): 766-781 (2001) |
| 2000 |
|---|
| 27 | | Brendan J. Frey:
Filling In Scenes by Propagating Probabilities through Layers and Into Appearance Models.
CVPR 2000: 1185-1192 |
| 26 | | Nebojsa Jojic,
Nemanja Petrovic,
Thomas S. Huang,
Brendan J. Frey:
Transformed Hidden Markov Models: Estimating Mixture Models of Images and Inferring Spatial Transformations in Video Sequence.
CVPR 2000: 2026-2033 |
| 25 | | Milind R. Naphade,
Lawrence S. Chen,
Thomas S. Huang,
Brendan J. Frey:
Learning Sparse Multiple Cause Models.
ICPR 2000: 2642-2647 |
| 24 | | Trausti T. Kristjansson,
Brendan J. Frey,
Thomas S. Huang:
Event-Coupled Hidden Markov Models.
IEEE International Conference on Multimedia and Expo (I) 2000: 385-388 |
| 23 | | Brendan J. Frey,
Anitha Kannan:
Accumulator Networks: Suitors of Local Probability Propagation.
NIPS 2000: 486-492 |
| 22 | | Brendan J. Frey,
Relu Patrascu,
Tommi Jaakkola,
Jodi Moran:
Sequentially Fitting ``Inclusive'' Trees for Inference in Noisy-OR Networks.
NIPS 2000: 493-499 |
| 21 | | Trausti T. Kristjansson,
Brendan J. Frey:
Keeping Flexible Active Contours on Track using Metropolis Updates.
NIPS 2000: 859-865 |
| 20 | | Brendan J. Frey,
Nebojsa Jojic:
Learning Graphical Models of Images, Videos and Their Spatial Transformations.
UAI 2000: 184-191 |
| 1999 |
|---|
| 19 | | Brendan J. Frey,
Nebojsa Jojic:
Estimating Mixture Models of Images and Inferring Spatial Transformations Using the EM Algorithm.
CVPR 1999: 1416-1422 |
| 18 | | Antonio Colmenarez,
Brendan J. Frey,
Thomas S. Huang:
A Probabilistic Framework for Embedded Face and Facial Expression Recognition.
CVPR 1999: 1592-1597 |
| 17 | | Vladimir Pavlovic,
Brendan J. Frey,
Thomas S. Huang:
Time-Series Classification Using Mixed-State Dynamic Bayesian Networks.
CVPR 1999: 2609- |
| 16 | | Brendan J. Frey,
Nebojsa Jojic:
Transformed Component Analysis: Joint Estimation of Spatial Transformations and Image Components.
ICCV 1999: 1190-1196 |
| 15 | | Antonio Colmenarez,
Brendan J. Frey,
Thomas S. Huang:
Embedded Face and Facial Expression Recognition.
ICIP (1) 1999: 633-637 |
| 14 | | Antonio Colmenarez,
Brendan J. Frey,
Thomas S. Huang:
Detection and Tracking of Faces and Facial Features.
ICIP (1) 1999: 657-661 |
| 13 | | Brendan J. Frey:
Local Probability Propagation for Factor Analysis.
NIPS 1999: 442-448 |
| 12 | | Nebojsa Jojic,
Brendan J. Frey:
Topographic Transformation as a Discrete Latent Variable.
NIPS 1999: 477-483 |
| 11 | | Vladimir Pavlovic,
Brendan J. Frey,
Thomas S. Huang:
Variational Learning in Mixed-State Dynamic Graphical Models.
UAI 1999: 522-530 |
| 10 | | Brendan J. Frey,
Geoffrey E. Hinton:
Variational Learning in Nonlinear Gaussian Belief Networks.
Neural Computation 11(1): 193-213 (1999) |
| 1998 |
|---|
| 9 | | Brendan J. Frey,
Antonio Colmenarez,
Thomas S. Huang:
Mixtures of Local Linear Subspaces for Face Recognition.
CVPR 1998: 32-37 |
| 8 | | Milind R. Naphade,
Trausti T. Kristjansson,
Brendan J. Frey,
Thomas S. Huang:
Probabalistic Multimedia Objects (Multijects): A Novel Approach to Video Indexing and Retrieval in Multimedia Systems.
ICIP (3) 1998: 536-540 |
| 7 | | Brendan J. Frey,
Frank R. Kschischang:
Early Detection and Trellis Splicing: Reduced-Complexity Iterative Decoding.
IEEE Journal on Selected Areas in Communications 16(2): 153-159 (1998) |
| 6 | | Frank R. Kschischang,
Brendan J. Frey:
Iterative Decoding of Compound Codes by Probability Propagation in Graphical Models.
IEEE Journal on Selected Areas in Communications 16(2): 219-230 (1998) |
| 1997 |
|---|
| 5 | | Brendan J. Frey,
David J. C. MacKay:
A Revolution: Belief Propagation in Graphs with Cycles.
NIPS 1997 |
| 4 | | Brendan J. Frey,
Geoffrey E. Hinton:
Efficient Stochastic Source Coding and an Application to a Bayesian Network Source Model.
Comput. J. 40(2/3): 157-165 (1997) |
| 1996 |
|---|
| 3 | | Brendan J. Frey,
Geoffrey E. Hinton:
Free Energy Coding.
Data Compression Conference 1996: 73-81 |
| 2 | | Brendan J. Frey:
Continuous Sigmoidal Belief Networks Trained using Slice Sampling.
NIPS 1996: 452-458 |
| 1995 |
|---|
| 1 | | Brendan J. Frey,
Geoffrey E. Hinton,
Peter Dayan:
Does the Wake-sleep Algorithm Produce Good Density Estimators?
NIPS 1995: 661-667 |
