| * | 2008 |
| 10 | EE | Antti Airola,
Sampo Pyysalo,
Jari Björne,
Tapio Pahikkala,
Filip Ginter,
Tapio Salakoski:
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning.
BMC Bioinformatics 9(S-11): (2008) |
| 9 | EE | Sampo Pyysalo,
Antti Airola,
Juho Heimonen,
Jari Björne,
Filip Ginter,
Tapio Salakoski:
Comparative analysis of five protein-protein interaction corpora.
BMC Bioinformatics 9(S-3): (2008) |
| 2007 |
| 8 | EE | Sampo Pyysalo,
Filip Ginter,
Juho Heimonen,
Jari Björne,
Jorma Boberg,
Jouni Järvinen,
Tapio Salakoski:
BioInfer: a corpus for information extraction in the biomedical domain.
BMC Bioinformatics 8: (2007) |
| 2006 |
| 7 | | Tapio Salakoski,
Filip Ginter,
Sampo Pyysalo,
Tapio Pahikkala:
Advances in Natural Language Processing, 5th International Conference on NLP, FinTAL 2006, Turku, Finland, August 23-25, 2006, Proceedings
Springer 2006 |
| 6 | EE | Filip Ginter,
Sampo Pyysalo,
Jorma Boberg,
Tapio Salakoski:
Regular Approximation of Link Grammar.
FinTAL 2006: 564-575 |
| 2005 |
| 5 | | Tapio Pahikkala,
Sampo Pyysalo,
Filip Ginter,
Jorma Boberg,
Jouni Järvinen,
Tapio Salakoski:
Kernels Incorporating Word Positional Information in Natural Language Disambiguation Tasks.
FLAIRS Conference 2005: 442-448 |
| 4 | EE | Tapio Pahikkala,
Filip Ginter,
Jorma Boberg,
Jouni Järvinen,
Tapio Salakoski:
Contextual weighting for Support Vector Machines in literature mining: an application to gene versus protein name disambiguation.
BMC Bioinformatics 6: 157 (2005) |
| 2004 |
| 3 | EE | Filip Ginter,
Sampo Pyysalo,
Jorma Boberg,
Jouni Järvinen,
Tapio Salakoski:
Ontology-Based Feature Transformations: A Data-Driven Approach.
EsTAL 2004: 280-291 |
| 2 | EE | Filip Ginter,
Tapio Pahikkala,
Sampo Pyysalo,
Jorma Boberg,
Jouni Järvinen,
Tapio Salakoski:
Extracting Protein-Protein Interaction Sentences by Applying Rough Set Data Analysis.
Rough Sets and Current Trends in Computing 2004: 780-785 |
| 1 | EE | Filip Ginter,
Jorma Boberg,
Jouni Järvinen,
Tapio Salakoski:
New Techniques for Disambiguation in Natural Language and Their Application to Biological Text.
Journal of Machine Learning Research 5: 605-621 (2004) |