John A. Gunnels

	2009
37		Ahmad Faraj, Sameer Kumar, Brian Smih, Amith R. Mamidala, John A. Gunnels, Philip Heidelberger: MPI collective communications on the blue gene/p supercomputer: algorithms and optimizations. ICS 2009: 489-490
36		Michael Kistler, John A. Gunnels, Daniel A. Brokenshire, Brad Benton: Petascale computing with accelerators. PPOPP 2009: 241-250
35		Michael Kistler, John A. Gunnels, Daniel A. Brokenshire, Brad Benton: Programming the Linpack benchmark for the IBM PowerXCell 8i processor. Scientific Programming 17(1-2): 43-57 (2009)
	2008
34		Vaibhav Saxena, Prashant Agrawal, Yogish Sabharwal, Vijay K. Garg, Vimitha A. Kuruvilla, John A. Gunnels: Optimization of BLAS on the Cell Processor. HiPC 2008: 18-29
33		Yogish Sabharwal, Saurabh K. Garg, Rahul Garg, John A. Gunnels, Ramendra K. Sahoo: Optimization of Fast Fourier Transforms on the Blue Gene/L Supercomputer. HiPC 2008: 309-322
32		Eric J. Bohm, Abhinav Bhatele, Laxmikant V. Kalé, Mark E. Tuckerman, Sameer Kumar, John A. Gunnels, Glenn J. Martyna: Fine-grained parallelization of the Car - Parrinello ab initio molecular dynamics method on the IBM Blue Gene/L supercomputer. IBM Journal of Research and Development 52(1-2): 159-176 (2008)
31		Bronis R. de Supinski, Martin Schulz, Vasily Bulatov, William H. Cabot, Bor Chan, Andrew W. Cook, Erik W. Draeger, James N. Glosli, Jeffrey A. Greenough, Keith W. Henderson, Alison Kubota, Steve Louis, Brian J. Miller, Mehul V. Patel, Thomas E. Spelce, Frederick H. Streitz, Peter L. Williams, Robert K. Yates, Andy Yoo, George Almási, Gyan Bhanot, Alan Gara, John A. Gunnels, Manish Gupta, José E. Moreira, James C. Sexton, Robert Walkup, Charles Archer, François Gygi, Timothy C. Germann, Kai Kadau, Peter S. Lomdahl, Charles Rendleman, Michael L. Welcome, William McLendon, Bruce Hendrickson, Franz Franchetti, Stefan Kral, Juergen Lorenz, Christoph W. Überhuber, Edmond Chow, Ümit V. Çatalyürek: BlueGene/L applications: Parallelism On a Massive Scale. IJHPCA 22(1): 33-51 (2008)
	2007
30		James N. Glosli, D. F. Richards, K. J. Caspersen, R. E. Rudd, John A. Gunnels, Frederick H. Streitz: Extending stability beyond CPU millennium: a micron-scale atomistic simulation of Kelvin-Helmholtz instability. SC 2007: 58
29		Kamen Yotov, Thomas Roeder, Keshav Pingali, John A. Gunnels, Fred G. Gustavson: An experimental comparison of cache-oblivious and cache-conscious programs. SPAA 2007: 93-104
	2006
28		Fred G. Gustavson, John A. Gunnels, James C. Sexton: Minimal Data Copy for Dense Linear Algebra Factorization. PARA 2006: 540-549
27		John A. Gunnels, Fred G. Gustavson, Keshav Pingali, Kamen Yotov: Is Cache-Oblivious DGEMM Viable? PARA 2006: 919-928
26		François Gygi, Erik W. Draeger, Martin Schulz, Bronis R. de Supinski, John A. Gunnels, Vernon Austel, James C. Sexton, Franz Franchetti, Stefan Kral, Christoph W. Ueberhuber, Juergen Lorenz: Gordon Bell finalists I - Large-scale electronic structure calculations of high-Z metals on the BlueGene/L platform. SC 2006: 45
25		Hiroshi Akiba, Tomonobu Ohyama, Yoshinoir Shibata, Kiyoshi Yuyama, Yoshikazu Katai, Ryuichi Takeuchi, Takeshi Hoshino, Shinobu Yoshimura, Hirohisa Noguchi, Manish Gupta, John A. Gunnels, Vernon Austel, Yogish Sabharwal, Rahul Garg, Shoji Kato, Takashi Kawakami, Satoru Todokoro, Junko Ikeda: Gordon Bell finalists I - Large scale drop impact analysis of mobile phone using ADVC on Blue Gene/L. SC 2006: 46
	2005
24		George S. Almasi, Gyan Bhanot, Dong Chen, Maria Eleftheriou, Blake G. Fitch, Alan Gara, Robert S. Germain, John A. Gunnels, Manish Gupta, Philip Heidelberger, Michael Pitman, Aleksandr Rayshubskiy, James C. Sexton, Frank Suits, Pavlos Vranas, Robert Walkup, T. J. Christopher Ward, Yuriy Zhestkov, Alessandro Curioni, Wanda Andreoni, Charles Archer, José E. Moreira, Richard Loft, Henry M. Tufo, Theron Voran, Katherine Riley: Early Experience with Scientific Applications on the Blue Gene/L Supercomputer. Euro-Par 2005: 560-570
23		François Gygi, Robert K. Yates, Juergen Lorenz, Erik W. Draeger, Franz Franchetti, Christoph W. Ueberhuber, Bronis R. de Supinski, Stefan Kral, John A. Gunnels, James C. Sexton: Large-Scale First-Principles Molecular Dynamics simulations on the BlueGene/L Platform using the Qbox code. SC 2005: 24
22		Paolo Bientinesi, John A. Gunnels, Margaret E. Myers, Enrique S. Quintana-Ortí, Robert A. van de Geijn: The science of deriving dense linear algebra algorithms. ACM Trans. Math. Softw. 31(1): 1-26 (2005)
21		Bjarne Stig Andersen, John A. Gunnels, Fred G. Gustavson, John K. Reid, Jerzy Wasniewski: A fully portable high performance minimal storage hybrid format cholesky algorithm. ACM Trans. Math. Softw. 31(2): 201-227 (2005)
20		Siddhartha Chatterjee, Leonardo R. Bachega, Peter Bergner, Kenneth A. Dockser, John A. Gunnels, Manish Gupta, Fred G. Gustavson, Christopher A. Lapkowski, Gary K. Liu, Mark P. Mendell, Rohini D. Nair, Charles D. Wait, T. J. Christopher Ward, Peng Wu: Design and exploitation of a high-performance SIMD floating-point unit for Blue Gene/L. IBM Journal of Research and Development 49(2-3): 377-392 (2005)
19		George Almási, Charles Archer, José G. Castaños, John A. Gunnels, C. Christopher Erway, Philip Heidelberger, Xavier Martorell, José E. Moreira, Kurt W. Pinnow, Joe Ratterman, Burkhard D. Steinmacher-Burow, William Gropp, Brian R. Toonen: Design and implementation of message-passing services for the Blue Gene/L supercomputer. IBM Journal of Research and Development 49(2-3): 393-406 (2005)
18		Xavier Martorell, Nils Smeds, Robert Walkup, José R. Brunheroto, George Almási, John A. Gunnels, Luiz De Rose, Jesús Labarta, Francesc Escalé, Judit Gimenez, Harald Servat, José E. Moreira: Blue Gene/L performance tools. IBM Journal of Research and Development 49(2-3): 407-424 (2005)
	2004
17		Leonardo R. Bachega, Siddhartha Chatterjee, Kenneth A. Dockser, John A. Gunnels, Manish Gupta, Fred G. Gustavson, Christopher A. Lapkowski, Gary K. Liu, Mark P. Mendell, Charles D. Wait, T. J. Christopher Ward: A High-Performance SIMD Floating Point Unit for BlueGene/L: Architecture, Compilation, and Algorithm Design. IEEE PACT 2004: 85-96
16		John A. Gunnels, Fred G. Gustavson: A New Array Format for Symmetric and Triangular Matrices. PARA 2004: 247-255
15		John A. Gunnels, Fred G. Gustavson, Greg Henry, Robert A. van de Geijn: A Family of High-Performance Matrix Multiplication Algorithms. PARA 2004: 256-265
14		Paolo Bientinesi, John A. Gunnels, Fred G. Gustavson, Greg Henry, Margaret E. Myers, Enrique S. Quintana-Ortí, Robert A. van de Geijn: Rapid Development of High-Performance Linear Algebra Libraries. PARA 2004: 376-384
13		George Almási, Charles Archer, John A. Gunnels, Philip Heidelberger, Xavier Martorell, José E. Moreira: Architecture and Performance of the BlueGene/L Message Layer. PVM/MPI 2004: 405-414
12		George Almási, Siddhartha Chatterjee, Alan Gara, John A. Gunnels, Manish Gupta, Amy Henning, José E. Moreira, Robert Walkup: Unlocking the Performance of the BlueGene/L Supercomputer. SC 2004: 57
	2002
11		Bjarne Stig Andersen, John A. Gunnels, Fred G. Gustavson, Jerzy Wasniewski: A Recursive Formulation of the Inversion of Symmetric Positive Definite Matrices in Packed Storage Data Format. PARA 2002: 287-296
10		Narasimha R. Adiga, George Almási, Yariv Aridor, Rajkishore Barik, Daniel K. Beece, Ralph Bellofatto, Gyan Bhanot, Randy Bickford, Matthias A. Blumrich, Arthur A. Bright, José R. Brunheroto, Calin Cascaval, José G. Castaños, W. Chan, Luis Ceze, Paul Coteus, Siddhartha Chatterjee, Dong Chen, George L.-T. Chiu, Thomas M. Cipolla, Paul Crumley, K. M. Desai, Alina Deutsch, Tamar Domany, Marc Boris Dombrowa, Wilm E. Donath, Maria Eleftheriou, C. Christopher Erway, J. Esch, Blake G. Fitch, Joseph Gagliano, Alan Gara, Rahul Garg, Robert S. Germain, Mark Giampapa, Balaji Gopalsamy, John A. Gunnels, Manish Gupta, Fred G. Gustavson, Shawn Hall, Ruud A. Haring, David F. Heidel, Philip Heidelberger, Lorraine Herger, Dirk Hoenicke, R. D. Jackson, T. Jamal-Eddine, Gerard V. Kopcsay, Elie Krevat, Manish P. Kurhekar, Alphonso P. Lanzetta, Derek Lieber, L. K. Liu, M. Lu, Mark P. Mendell, A. Misra, Y. Moatti, Lawrence S. Mok, José E. Moreira, Ben J. Nathanson, Matthew Newton, Martin Ohmacht, Adam J. Oliner, Vinayaka Pandit, R. B. Pudota, Rick A. Rand, Richard D. Regan, Bradley Rubin, Albert E. Ruehli, Silvius Rus, Ramendra K. Sahoo, Alda Sanomiya, Eugen Schenfeld, M. Sharma, Edi Shmueli, Sarabjeet Singh, Peilin Song, Vijay Srinivasan, Burkhard D. Steinmacher-Burow, Karin Strauss, Christopher W. Surovic, Richard A. Swetz, Todd Takken, R. Brett Tremaine, Mickey Tsao, Arun R. Umamaheshwaran, P. Verma, Pavlos Vranas, T. J. Christopher Ward, Michael E. Wazlowski, W. Barrett, C. Engel, B. Drehmel, B. Hilgart, D. Hill, F. Kasemkhani, David J. Krolak, C. T. Li, Thomas A. Liebsch, James A. Marcella, A. Muff, A. Okomo, M. Rouse, A. Schram, M. Tubbs, G. Ulsh, Charles D. Wait, J. Wittrup, M. Bae, Kenneth A. Dockser, Lynn Kissel, Mark K. Seager, Jeffrey S. Vetter, K. Yates: An overview of the BlueGene/L Supercomputer. SC 2002: 1-22
	2001
9		John A. Gunnels, Robert A. van de Geijn, Daniel S. Katz, Enrique S. Quintana-Ortí: Fault-Tolerant High-Performance Matrix Multiplication: Theory and Practice. DSN 2001: 47-56
8		John A. Gunnels, Greg Henry, Robert A. van de Geijn: A Family of High-Performance Matrix Multiplication Algorithms. International Conference on Computational Science (1) 2001: 51-60
7		John A. Gunnels, Fred G. Gustavson, Greg Henry, Robert A. van de Geijn: FLAME: Formal Linear Algebra Methods Environment. ACM Trans. Math. Softw. 27(4): 422-455 (2001)
	2000
6		John A. Gunnels, Robert A. van de Geijn: Formal Methods for High-Performance Linear Algebra Libraries. The Architecture of Scientific Software 2000: 193-210
	1998
5		Gregory S. Baker, John A. Gunnels, Greg Morrow, Béatrice Riviére, Robert A. van de Geijn: PLAPACK: High Performance through High-Level Abstraction. ICPP 1998: 414-
4		John A. Gunnels, Calvin Lin, Greg Morrow, Robert A. van de Geijn: A Flexible Class of Parallel Matrix Multiplication Algorithms. IPPS/SPDP 1998: 110-116
	1997
3		Phillip Alpatov, Gregory S. Baker, Carter Edwards, John A. Gunnels, Greg Morrow, James Overfelt, Robert A. van de Geijn, Yuan-Jye J. Wu: PLAPACK: Parallel Linear Algebra Package. PPSC 1997
2		Almadena Yu. Chtchelkanova, John A. Gunnels, Greg Morrow, James Overfelt, Robert A. van de Geijn: Parallel implementation of BLAS: general techniques for Level 3 BLAS. Concurrency - Practice and Experience 9(9): 837-857 (1997)
	1994
1		John A. Gunnels, Paul Cull, J. L. Holloway: Genetic Algorithms and Simulated Annealing for Gene Mapping. International Conference on Evolutionary Computation 1994: 385-390

Coauthor Index

1	Narasimha R. Adiga	[10]
2	Prashant Agrawal	[34]
3	Hiroshi Akiba	[25]
4	George Almási (George S. Almasi)	[10] [12] [13] [18] [19] [24] [31]
5	Phillip Alpatov	[3]
6	Bjarne Stig Andersen	[11] [21]
7	Wanda Andreoni	[24]
8	Charles Archer	[13] [19] [24] [31]
9	Yariv Aridor	[10]
10	Vernon Austel	[25] [26]
11	Leonardo R. Bachega	[17] [20]
12	M. Bae	[10]
13	Gregory S. Baker	[3] [5]
14	Rajkishore Barik	[10]
15	W. Barrett	[10]
16	Daniel K. Beece	[10]
17	Ralph Bellofatto	[10]
18	Brad Benton	[35] [36]
19	Peter Bergner	[20]
20	Gyan Bhanot	[10] [24] [31]
21	Abhinav Bhatele	[32]
22	Randy Bickford	[10]
23	Paolo Bientinesi	[14] [22]
24	Matthias A. Blumrich	[10]
25	Eric J. Bohm	[32]
26	Arthur A. Bright	[10]
27	Daniel A. Brokenshire	[35] [36]
28	José R. Brunheroto	[10] [18]
29	Vasily Bulatov	[31]
30	William H. Cabot	[31]
31	Calin Cascaval	[10]
32	K. J. Caspersen	[30]
33	José G. Castaños	[10] [19]
34	Ümit V. Çatalyürek	[31]
35	Luis Ceze	[10]
36	Bor Chan	[31]
37	W. Chan	[10]
38	Siddhartha Chatterjee	[10] [12] [17] [20]
39	Dong Chen	[10] [24]
40	George L.-T. Chiu	[10]
41	Edmond Chow	[31]
42	Almadena Yu. Chtchelkanova	[2]
43	Thomas M. Cipolla	[10]
44	Andrew W. Cook	[31]
45	Paul Coteus	[10]
46	Paul Crumley	[10]
47	Paul Cull	[1]
48	Alessandro Curioni	[24]
49	K. M. Desai	[10]
50	Alina Deutsch	[10]
51	Kenneth A. Dockser	[10] [17] [20]
52	Tamar Domany	[10]
53	Marc Boris Dombrowa	[10]
54	Wilm E. Donath	[10]
55	Erik W. Draeger	[23] [26] [31]
56	B. Drehmel	[10]
57	Carter Edwards	[3]
58	Maria Eleftheriou	[10] [24]
59	C. Engel	[10]
60	C. Christopher Erway	[10] [19]
61	Francesc Escalé	[18]
62	J. Esch	[10]
63	Ahmad Faraj	[37]
64	Blake G. Fitch	[10] [24]
65	Franz Franchetti	[23] [26] [31]
66	Joseph Gagliano	[10]
67	Alan Gara	[10] [12] [24] [31]
68	Rahul Garg	[10] [25] [33]
69	Saurabh K. Garg	[33]
70	Vijay K. Garg	[34]
71	Robert A. van de Geijn	[2] [3] [4] [5] [6] [7] [8] [9] [14] [15] [22]
72	Robert S. Germain	[10] [24]
73	Timothy C. Germann	[31]
74	Mark Giampapa	[10]
75	Judit Gimenez	[18]
76	James N. Glosli	[30] [31]
77	Balaji Gopalsamy	[10]
78	Jeffrey A. Greenough	[31]
79	William Gropp (William D. Gropp, Bill Gropp)	[19]
80	Manish Gupta	[10] [12] [17] [20] [24] [25] [31]
81	Fred G. Gustavson	[7] [10] [11] [14] [15] [16] [17] [20] [21] [27] [28] [29]
82	François Gygi	[23] [26] [31]
83	Shawn Hall	[10]
84	Ruud A. Haring	[10]
85	David F. Heidel	[10]
86	Philip Heidelberger	[10] [13] [19] [24] [37]
87	Keith W. Henderson	[31]
88	Bruce Hendrickson	[31]
89	Amy Henning	[12]
90	Greg Henry	[7] [8] [14] [15]
91	Lorraine Herger	[10]
92	B. Hilgart	[10]
93	D. Hill	[10]
94	Dirk Hoenicke	[10]
95	J. L. Holloway	[1]
96	Takeshi Hoshino	[25]
97	Junko Ikeda	[25]
98	R. D. Jackson	[10]
99	T. Jamal-Eddine	[10]
100	Kai Kadau	[31]
101	Laxmikant V. Kalé	[32]
102	F. Kasemkhani	[10]
103	Yoshikazu Katai	[25]
104	Shoji Kato	[25]
105	Daniel S. Katz	[9]
106	Takashi Kawakami	[25]
107	Lynn Kissel	[10]
108	Michael Kistler	[35] [36]
109	Gerard V. Kopcsay	[10]
110	Stefan Kral	[23] [26] [31]
111	Elie Krevat	[10]
112	David J. Krolak	[10]
113	Alison Kubota	[31]
114	Sameer Kumar	[32] [37]
115	Manish P. Kurhekar	[10]
116	Vimitha A. Kuruvilla	[34]
117	Jesús Labarta	[18]
118	Alphonso P. Lanzetta	[10]
119	Christopher A. Lapkowski	[17] [20]
120	C. T. Li	[10]
121	Derek Lieber	[10]
122	Thomas A. Liebsch	[10]
123	Calvin Lin	[4]
124	Gary K. Liu	[17] [20]
125	L. K. Liu	[10]
126	Richard Loft	[24]
127	Peter S. Lomdahl	[31]
128	Juergen Lorenz	[23] [26] [31]
129	Steve Louis	[31]
130	M. Lu	[10]
131	Amith R. Mamidala	[37]
132	James A. Marcella	[10]
133	Xavier Martorell	[13] [18] [19]
134	Glenn J. Martyna	[32]
135	William McLendon	[31]
136	Mark P. Mendell	[10] [17] [20]
137	Brian J. Miller	[31]
138	A. Misra	[10]
139	Y. Moatti	[10]
140	Lawrence S. Mok	[10]
141	José E. Moreira	[10] [12] [13] [18] [19] [24] [31]
142	Greg Morrow	[2] [3] [4] [5]
143	A. Muff	[10]
144	Margaret E. Myers	[14] [22]
145	Rohini D. Nair	[20]
146	Ben J. Nathanson	[10]
147	Matthew Newton	[10]
148	Hirohisa Noguchi	[25]
149	Martin Ohmacht	[10]
150	Tomonobu Ohyama	[25]
151	A. Okomo	[10]
152	Adam J. Oliner	[10]
153	James Overfelt	[2] [3]
154	Vinayaka Pandit	[10]
155	Mehul V. Patel	[31]
156	Keshav Pingali	[27] [29]
157	Kurt W. Pinnow	[19]
158	Michael Pitman	[24]
159	R. B. Pudota	[10]
160	Enrique S. Quintana-Ortí	[9] [14] [22]
161	Rick A. Rand	[10]
162	Joe Ratterman	[19]
163	Aleksandr Rayshubskiy	[24]
164	Richard D. Regan	[10]
165	John K. Reid (J. K. Reid)	[21]
166	Charles Rendleman	[31]
167	D. F. Richards	[30]
168	Katherine Riley	[24]
169	Béatrice Riviére	[5]
170	Thomas Roeder	[29]
171	Luiz De Rose	[18]
172	M. Rouse	[10]
173	Bradley Rubin	[10]
174	R. E. Rudd	[30]
175	Albert E. Ruehli	[10]
176	Silvius Rus	[10]
177	Yogish Sabharwal	[25] [33] [34]
178	Ramendra K. Sahoo	[10] [33]
179	Alda Sanomiya	[10]
180	Vaibhav Saxena	[34]
181	Eugen Schenfeld	[10]
182	A. Schram	[10]
183	Martin Schulz	[26] [31]
184	Mark K. Seager	[10]
185	Harald Servat	[18]
186	James C. Sexton	[23] [24] [26] [28] [31]
187	M. Sharma	[10]
188	Yoshinoir Shibata	[25]
189	Edi Shmueli	[10]
190	Sarabjeet Singh	[10]
191	Nils Smeds	[18]
192	Brian Smih	[37]
193	Peilin Song	[10]
194	Thomas E. Spelce	[31]
195	Vijay Srinivasan	[10]
196	Burkhard D. Steinmacher-Burow	[10] [19]
197	Karin Strauss	[10]
198	Frederick H. Streitz	[30] [31]
199	Frank Suits	[24]
200	Bronis R. de Supinski	[23] [26] [31]
201	Christopher W. Surovic	[10]
202	Richard A. Swetz	[10]
203	Ryuichi Takeuchi	[25]
204	Todd Takken	[10]
205	Satoru Todokoro	[25]
206	Brian R. Toonen	[19]
207	R. Brett Tremaine	[10]
208	Mickey Tsao	[10]
209	M. Tubbs	[10]
210	Mark E. Tuckerman	[32]
211	Henry M. Tufo	[24]
212	Christoph W. Ueberhuber (Christoph W. Überhuber)	[23] [26] [31]
213	G. Ulsh	[10]
214	Arun R. Umamaheshwaran	[10]
215	P. Verma	[10]
216	Jeffrey S. Vetter	[10]
217	Theron Voran	[24]
218	Pavlos Vranas	[10] [24]
219	Charles D. Wait	[10] [17] [20]
220	Robert Walkup	[12] [18] [24] [31]
221	T. J. Christopher Ward	[10] [17] [20] [24]
222	Jerzy Wasniewski	[11] [21]
223	Michael E. Wazlowski	[10]
224	Michael L. Welcome	[31]
225	Peter L. Williams	[31]
226	J. Wittrup	[10]
227	Peng Wu	[20]
228	Yuan-Jye J. Wu	[3]
229	K. Yates	[10]
230	Robert K. Yates	[23] [31]
231	Andy Yoo	[31]
232	Shinobu Yoshimura	[25]
233	Kamen Yotov	[27] [29]
234	Kiyoshi Yuyama	[25]
235	Yuriy Zhestkov	[24]

Colors in the list of coauthors