Alexander J. Hartemink

	2009
28		Xin Guo, Alexander J. Hartemink: Domain-oriented edge-based alignment of protein interaction networks. Bioinformatics 25(12): (2009)
	2008
27		Joshua W. Robinson, Alexander J. Hartemink: Non-stationary dynamic Bayesian networks. NIPS 2008: 1369-1376
26		Martha L. Bulyk, Ernest Fraenkel, Alexander J. Hartemink, Yael Mandel-Gutfreund: Session Introduction. Pacific Symposium on Biocomputing 2008: 438-440
25		Raluca Gordân, Alexander J. Hartemink: Using DNA Duplex Stability Information for Transcription Factor Binding Site Discovery. Pacific Symposium on Biocomputing 2008: 453-464
24		Raluca Gordân, Leelavati Narlikar, Alexander J. Hartemink: A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery. RECOMB 2008: 98-111
	2007
23		Martha L. Bulyk, Alexander J. Hartemink, Ernest Fraenkel, Gary D. Stormo: Session Introduction. Pacific Symposium on Biocomputing 2007: 470-471
22		Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink: Nucleosome Occupancy Information Improves de novo Motif Discovery. RECOMB 2007: 107-121
21		Allister Bernard, David S. Vaughn, Alexander J. Hartemink: Reconstructing the Topology of Protein Complexes. RECOMB 2007: 32-46
	2006
20		Leelavati Narlikar, Raluca Gordân, Uwe Ohler, Alexander J. Hartemink: Informative priors based on transcription factor structural class improve de novo motif discovery. ISMB (Supplement of Bioinformatics) 2006: 384-392
19		Pallavi N. Pratapa, Edward F. Patz Jr., Alexander J. Hartemink: Finding Diagnostic Biomarkers in Proteomic Spectra. Pacific Symposium on Biocomputing 2006: 279-290
18		Leelavati Narlikar, Alexander J. Hartemink: Sequence features of DNA binding sites reveal structural class of associated transcription factor. Bioinformatics 22(2): 157-163 (2006)
	2005
17		Allister Bernard, Alexander J. Hartemink: Informative Structure Priors: Joint Learning of Dynamic Regulatory Networks from Multiple Types of Data. Pacific Symposium on Biocomputing 2005
16		Alexander J. Hartemink, Eran Segal: Session Introduction: Joint Learning from Multiple Types of Genomic Data. Pacific Symposium on Biocomputing 2005
15		Peng Yin, Alexander J. Hartemink: Theoretical and practical advances in genome halving. Bioinformatics 21(7): 869-879 (2005)
14		Balaji Krishnapuram, Lawrence Carin, Mário A. T. Figueiredo, Alexander J. Hartemink: Sparse Multinomial Logistic Regression: Fast Algorithms and Generalization Bounds. IEEE Trans. Pattern Anal. Mach. Intell. 27(6): 957-968 (2005)
	2004
13		Balaji Krishnapuram, David Williams, Ya Xue, Alexander J. Hartemink, Lawrence Carin, Mário A. T. Figueiredo: On Semi-Supervised Classification. NIPS 2004
12		Alexander J. Hartemink, Eran Segal: Session Introduction. Pacific Symposium on Biocomputing 2004: 262-263
11		Jing Yu, V. Anne Smith, Paul P. Wang, Alexander J. Hartemink, Erich D. Jarvis: Advances to Bayesian network inference for generating causal networks from observational biological data. Bioinformatics 20(18): 3594-3603 (2004)
10		Balaji Krishnapuram, Alexander J. Hartemink, Lawrence Carin, Mário A. T. Figueiredo: A Bayesian Approach to Joint Feature Selection and Classifier Design. IEEE Trans. Pattern Anal. Mach. Intell. 26(9): 1105-1111 (2004)
9		Balaji Krishnapuram, Lawrence Carin, Alexander J. Hartemink: Joint Classifier and Feature Optimization for Comprehensive Cancer Diagnosis Using Gene Expression Data. Journal of Computational Biology 11(2/3): 227-242 (2004)
	2003
8		Peter D. Karp, Eric P. Neumann, Alexander J. Hartemink, Pedro Romero: Genome, Pathway, and Interaction Bioinformatics - Session Introduction. Pacific Symposium on Biocomputing 2003: 101-103
7		V. Anne Smith, Erich D. Jarvis, Alexander J. Hartemink: Influence of Network Topology and Data Collection on Network Inference. Pacific Symposium on Biocomputing 2003: 164-175
6		Balaji Krishnapuram, Lawrence Carin, Alexander J. Hartemink: Joint classifier and feature optimization for cancer diagnosis using gene expression data. RECOMB 2003: 167-175
	2002
5		V. Anne Smith, Erich D. Jarvis, Alexander J. Hartemink: Evaluating functional network inference using simulations of complex biological systems. ISMB 2002: 216-224
4		Alexander J. Hartemink, David K. Gifford, Tommi Jaakkola, Richard A. Young: Combining Location and Expression Data for Principled Discovery of Genetic Regulatory Network Models. Pacific Symposium on Biocomputing 2002: 437-449
3		Alexander J. Hartemink, David K. Gifford, Tommi Jaakkola, Richard A. Young: Bayesian Methods for Elucidating Genetic Regulatory Networks. IEEE Intelligent Systems 17(2): 37-43 (2002)
	2001
2		Alexander J. Hartemink, David K. Gifford, Tommi Jaakkola, Richard A. Young: Using Graphical Models and Genomic Expression Data to Statistically Validate Models of Genetic Regulatory Networks. Pacific Symposium on Biocomputing 2001: 422-433
	1999
1		Stuart E. Schechter, Todd Parnell, Alexander J. Hartemink: Anonymous Authentication of Membership in Dynamic Groups. Financial Cryptography 1999: 184-195

Coauthor Index

1	Allister Bernard	[17] [21]
2	Martha L. Bulyk	[23] [26]
3	Lawrence Carin	[6] [9] [10] [13] [14]
4	Mário A. T. Figueiredo	[10] [13] [14]
5	Ernest Fraenkel	[23] [26]
6	David K. Gifford	[2] [3] [4]
7	Raluca Gordân	[20] [22] [24] [25]
8	Xin Guo	[28]
9	Tommi Jaakkola	[2] [3] [4]
10	Erich D. Jarvis	[5] [7] [11]
11	Peter D. Karp	[8]
12	Balaji Krishnapuram	[6] [9] [10] [13] [14]
13	Yael Mandel-Gutfreund	[26]
14	Leelavati Narlikar	[18] [20] [22] [24]
15	Eric P. Neumann	[8]
16	Uwe Ohler	[20]
17	Todd Parnell	[1]
18	Edward F. Patz Jr.	[19]
19	Pallavi N. Pratapa	[19]
20	Joshua W. Robinson	[27]
21	Pedro Romero	[8]
22	Stuart E. Schechter	[1]
23	Eran Segal	[12] [16]
24	V. Anne Smith	[5] [7] [11]
25	Gary D. Stormo	[23]
26	David S. Vaughn	[21]
27	Paul P. Wang	[11]
28	David Williams	[13]
29	Ya Xue	[13]
30	Peng Yin	[15]
31	Richard A. Young	[2] [3] [4]
32	Jing Yu	[11]

Colors in the list of coauthors