Yoshihide Hayashizaki

	2009
19		Jessica C. Mar, Yasumasa Kimura, Kate Schroder, Katharine M. Irvine, Yoshihide Hayashizaki, Harukazu Suzuki, David A. Hume, John Quackenbush: Data-driven normalization strategies for high-throughput quantitative RT-PCR. BMC Bioinformatics 10: (2009)
18		Hideya Kawaji, Yoshihide Hayashizaki, Carsten O. Daub: SDRF2GRAPH - a visualization tool of a spreadsheet-based description of experimental processes. BMC Bioinformatics 10: (2009)
17		Takehiro Hashimoto, Michiel J. L. de Hoon, Sean M. Grimmond, Carsten O. Daub, Yoshihide Hayashizaki, Geoffrey J. Faulkner: Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite. Bioinformatics 25(19): 2613-2614 (2009)
	2007
16		Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, Martin C. Frith, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki: Large-scale clustering of CAGE tag expression data. BMC Bioinformatics 8: (2007)
	2006
15		Manisha Brahmachary, Christian Schönbach, Liang Yang, Enli Huang, Sin Lam Tan, Rajesh Chowdhary, S. P. T. Krishnan, Chin-Yo Lin, David A. Hume, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Vladimir B. Bajic: Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes. BMC Bioinformatics 7(S-5): (2006)
14		Alistair R. R. Forrest, Darrin F. Taylor, J. Lynn Fink, M. Milena Gongora, Cameron Flegg, Rohan D. Teasdale, Harukazu Suzuki, Mutsumi Kanamori, Chikatoshi Kai, Yoshihide Hayashizaki, Sean M. Grimmond: PhosphoregDB: The tissue and sub-cellular distribution of mammalian protein kinases and phosphatases. BMC Bioinformatics 7: 82 (2006)
13		J. Lynn Fink, Rajith N. Aturaliya, Melissa J. Davis, Fasheng Zhang, Kelly Hanson, Melvena S. Teasdale, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Rohan D. Teasdale: LOCATE: a mouse protein subcellular localization database. Nucleic Acids Research 34(Database-Issue): 213-217 (2006)
12		Hideya Kawaji, Takeya Kasukawa, Shiro Fukuda, Shintaro Katayama, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki: CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis. Nucleic Acids Research 34(Database-Issue): 632-636 (2006)
	2005
11		Noriyuki Kitagawa, Takanori Washio, Shunichi Kosugi, Tomoya Yamashita, Kenji Higashi, Hiroshi Yanagawa, Kenichi Higo, Koji Satoh, Yasuhiro Ohtomo, Tomomi Sunako, Kazuo Murakami, Kenichi Matsubara, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Shoshi Kikuchi, Masaru Tomita: Computational analysis suggests that alternative first exons are involved in tissue-specific transcription in rice (Oryza sativa). Bioinformatics 21(9): 1758-1763 (2005)
10		Ken C. Pang, Stuart Stephen, Pär G. Engström, Khairina Tajul-Arifin, Weisan Chen, Claes Wahlestedt, Boris Lenhard, Yoshihide Hayashizaki, John S. Mattick: RNAdb - a comprehensive mammalian noncoding RNA database. Nucleic Acids Research 33(Database-Issue): 125-130 (2005)
	2004
9		Shintaro Katayama, Mutsumi Kanamori, Yoshihide Hayashizaki: Integrated analysis of the genome and the transcriptome by FANTOM. Briefings in Bioinformatics 5(3): 249-258 (2004)
8		Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano: Large-scale collection and characterization of promoters of human and mouse genes. In Silico Biology 4: (2004)
7		Itoshi Nikaido, Chika Saito, Akiko Wakamoto, Yasuhiro Tomaru, Takahiro Arakawa, Yoshihide Hayashizaki, Yasushi Okazaki: EICO (Expression-based Imprint Candidate Organizer): finding disease-related imprinted genes. Nucleic Acids Research 32(Database-Issue): 548-551 (2004)
	2003
6		Rintaro Saito, Harukazu Suzuki, Yoshihide Hayashizaki: Construction of reliable protein-protein interaction networks with a new interaction generality measure. Bioinformatics 19(6): 756-763 (2003)
5		Takeya Kasukawa, Hidemasa Bono, Yoshihide Hayashizaki, Yasushi Okazaki, Hideo Matsuda: MaXML: mouse annotation XML. In Silico Biology 4: (2003)
	2002
4		Nobuyuki Kawagashira, Yasuhiro Ohtomo, Kazuo Murakami, Kenichi Matsubara, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Shoshi Kikuchi: Wavelet Profiles: Their Application in Oryza sativa DNA Sequence Analysis. CSB 2002: 345-346
3		Hidemasa Bono, Takeya Kasukawa, Masaaki Furuno, Yoshihide Hayashizaki, Yasushi Okazaki: FANTOM DB: database of Functional Annotation of RIKEN Mouse cDNA Clones. Nucleic Acids Research 30(1): 116-118 (2002)
2		Hidemasa Bono, Takeya Kasukawa, Yoshihide Hayashizaki, Yasushi Okazaki: READ: RIKEN Expression Array Database. Nucleic Acids Research 30(1): 211-213 (2002)
1		Jean-Marie Buerstedde, Hiroshi Arakawa, Akira Watahiki, Piero Carninci, Yoshihide Hayashizaki, Bernhard Korn, Jiri Plachy: The DT40 web site: sampling and connecting the genes of a B cell line. Nucleic Acids Research 30(1): 230-231 (2002)

Coauthor Index

1	Hiroshi Arakawa	[1]
2	Takahiro Arakawa	[7] [8]
3	Rajith N. Aturaliya	[13]
4	Vladimir B. Bajic	[15]
5	Hidemasa Bono	[2] [3] [5]
6	Manisha Brahmachary	[15]
7	Jean-Marie Buerstedde	[1]
8	Piero Carninci	[1] [4] [8] [11] [12] [13] [15] [16]
9	Weisan Chen	[10]
10	Joe Chiba	[8]
11	Rajesh Chowdhary	[15]
12	Carsten O. Daub	[17] [18]
13	Melissa J. Davis	[13]
14	Pär G. Engström	[10]
15	Geoffrey J. Faulkner	[17]
16	J. Lynn Fink	[13] [14]
17	Cameron Flegg	[14]
18	Alistair R. R. Forrest	[14]
19	Martin C. Frith	[16]
20	Shiro Fukuda	[12]
21	Masaaki Furuno	[3]
22	M. Milena Gongora	[14]
23	Sean M. Grimmond	[14] [17]
24	Kelly Hanson	[13]
25	Takehiro Hashimoto	[17]
26	Kenji Higashi	[11]
27	Kenichi Higo	[11]
28	Michiel J. L. de Hoon	[17]
29	Enli Huang	[15]
30	David A. Hume	[15] [19]
31	Katharine M. Irvine	[19]
32	Chikatoshi Kai	[12] [13] [14] [15]
33	Mutsumi Kanamori	[9] [14]
34	Takeya Kasukawa	[2] [3] [5] [12]
35	Shintaro Katayama	[9] [12]
36	Nobuyuki Kawagashira	[4]
37	Jun Kawai	[4] [8] [11] [12] [13] [15] [16]
38	Hideya Kawaji	[12] [18]
39	Alexander E. Kel	[8]
40	Shoshi Kikuchi	[4] [11]
41	Yasumasa Kimura	[19]
42	Noriyuki Kitagawa	[11]
43	Bernhard Korn	[1]
44	Shunichi Kosugi	[11]
45	S. P. T. Krishnan	[15]
46	Takio Kurita	[16]
47	Boris Lenhard	[10]
48	Chin-Yo Lin	[15]
49	Jessica C. Mar	[19]
50	Kenichi Matsubara	[4] [11]
51	Hideo Matsuda	[5]
52	John S. Mattick	[10]
53	Junko Mizushima-Sugano	[8]
54	Kazuo Murakami	[4] [11]
55	Kenta Nakai	[8]
56	Itoshi Nikaido	[7]
57	Yasuhiro Ohtomo	[4] [11]
58	Yuko Okamura-Oho	[16]
59	Yasushi Okazaki	[2] [3] [5] [7]
60	Ken C. Pang	[10]
61	Jiri Plachy	[1]
62	John Quackenbush	[19]
63	Chika Saito	[7]
64	Rintaro Saito	[6]
65	Yuta Sakakibara	[8]
66	Koji Satoh	[11]
67	Christian Schönbach	[15]
68	Kate Schroder	[19]
69	Kazuro Shimokawa	[16]
70	Matsuyuki Shirota	[8]
71	Stuart Stephen	[10]
72	Sumio Sugano	[8]
73	Tomomi Sunako	[11]
74	Harukazu Suzuki	[6] [14] [19]
75	Yutaka Suzuki	[8]
76	Khairina Tajul-Arifin	[10]
77	Toshihisa Takagi	[8]
78	Sin Lam Tan	[15]
79	Darrin F. Taylor	[14]
80	Melvena S. Teasdale	[13]
81	Rohan D. Teasdale	[13] [14]
82	Yasuhiro Tomaru	[7]
83	Masaru Tomita	[11]
84	Claes Wahlestedt	[10]
85	Akiko Wakamoto	[7]
86	Takanori Washio	[11]
87	Akira Watahiki	[1]
88	Riu Yamashita	[8]
89	Tomoya Yamashita	[11]
90	Hiroshi Yanagawa	[11]
91	Liang Yang	[15]
92	Fasheng Zhang	[13]