Manuela Helmer-Citterich

	2009
20		Gabriele Ausiello, Pier Federico Gherardini, Elena Gatti, Ottaviano Incani, Manuela Helmer-Citterich: Structural motifs recurring in different folds recognize the same ligand fragments. BMC Bioinformatics 10: (2009)
	2008
19		Graziano Pesole, Manuela Helmer-Citterich: Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 9(S-2): (2008)
18		Gabriele Ausiello, Pier Federico Gherardini, Paolo Marcatili, Anna Tramontano, Allegra Via, Manuela Helmer-Citterich: FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures. BMC Bioinformatics 9(S-2): (2008)
	2007
17		Rita Casadio, Manuela Helmer-Citterich, Graziano Pesole: Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 8(S-1): (2007)
16		Allegra Via, Pier Federico Gherardini, Enrico Ferraro, Gabriele Ausiello, Gianpaolo Scalia Tomba, Manuela Helmer-Citterich: False occurrences of functional motifs in protein sequences highlight evolutionary constraints. BMC Bioinformatics 8: (2007)
15		Gabriele Ausiello, Daniele Peluso, Allegra Via, Manuela Helmer-Citterich: Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites. BMC Bioinformatics 8(S-1): (2007)
14		Andreas Zanzoni, Gabriele Ausiello, Allegra Via, Pier Federico Gherardini, Manuela Helmer-Citterich: Phospho3D: a database of three-dimensional structures of protein phosphorylation sites. Nucleic Acids Research 35(Database-Issue): 229-231 (2007)
13		Allegra Via, Daniele Peluso, Pier Federico Gherardini, Emanuele de Rinaldis, Teresa Colombo, Gabriele Ausiello, Manuela Helmer-Citterich: 3dLOGO: a web server for the identification, analysis and use of conserved protein substructures. Nucleic Acids Research 35(Web-Server-Issue): 416-419 (2007)
12		Enrico Ferraro, Daniele Peluso, Allegra Via, Gabriele Ausiello, Manuela Helmer-Citterich: SH3-Hunter: discovery of SH3 domain interaction sites in proteins. Nucleic Acids Research 35(Web-Server-Issue): 451-454 (2007)
	2006
11		Enrico Ferraro, Allegra Via, Gabriele Ausiello, Manuela Helmer-Citterich: A novel structure-based encoding for machine-learning applied to the inference of SH3 domain specificity. Bioinformatics 22(19): 2333-2339 (2006)
	2005
10		Enrico Ferraro, Allegra Via, Gabriele Ausiello, Manuela Helmer-Citterich: A neural strategy for the inference of SH3 domain-peptide interaction specificity. BMC Bioinformatics 6(S-4): (2005)
9		Fabrizio Ferrè, Gabriele Ausiello, Andreas Zanzoni, Manuela Helmer-Citterich: Functional annotation by identification of local surface similarities: a novel tool for structural genomics. BMC Bioinformatics 6: 194 (2005)
8		Manuela Helmer-Citterich, Rita Casadio, Alessandro Guffanti, Giancarlo Mauri, Luciano Milanesi, Graziano Pesole, Giorgio Valle, Cecilia Saccone: Overview of BITS2005, the Second Annual Meeting of the Italian Bioinformatics Society. BMC Bioinformatics 6(S-4): (2005)
7		Gabriele Ausiello, Allegra Via, Manuela Helmer-Citterich: Query3d: a new method for high-throughput analysis of functional residues in protein structures. BMC Bioinformatics 6(S-4): (2005)
6		Allegra Via, Andreas Zanzoni, Manuela Helmer-Citterich: Seq2Struct: a resource for establishing sequence-structure links. Bioinformatics 21(4): 551-553 (2005)
5		Gabriele Ausiello, Andreas Zanzoni, Daniele Peluso, Allegra Via, Manuela Helmer-Citterich: pdbFun: mass selection and fast comparison of annotated PDB residues. Nucleic Acids Research 33(Web-Server-Issue): 133-137 (2005)
	2004
4		Allegra Via, Manuela Helmer-Citterich: A structural study for the optimisation of functional motifs encoded in protein sequences. BMC Bioinformatics 5: 50 (2004)
3		Fabrizio Ferrè, Gabriele Ausiello, Andreas Zanzoni, Manuela Helmer-Citterich: SURFACE: a database of protein surface regions for functional annotation. Nucleic Acids Research 32(Database-Issue): 240-244 (2004)
	2003
2		Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson: ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Research 31(13): 3625-3630 (2003)
1		Barbara Brannetti, Manuela Helmer-Citterich: iSPOT: a web tool to infer the interaction specificity of families of protein modules. Nucleic Acids Research 31(13): 3709-3711 (2003)

Coauthor Index

1	Rein Aasland	[2]
2	Gabriele Ausiello	[2] [3] [5] [7] [9] [10] [11] [12] [13] [14] [15] [16] [18] [20]
3	Peer Bork	[2]
4	Barbara Brannetti	[1] [2]
5	Scott Cameron	[2]
6	Rita Casadio	[8] [17]
7	Gianni Cesareni	[2]
8	Sophie Chabanis-Davidson	[2]
9	Teresa Colombo	[13]
10	Anna Costantini	[2]
11	Francesca Diella	[2]
12	Enrico Ferraro	[10] [11] [12] [16]
13	Fabrizio Ferrè	[2] [3] [9]
14	Elena Gatti	[20]
15	Christine Gemünd	[2]
16	Pier Federico Gherardini	[13] [14] [16] [18] [20]
17	Toby J. Gibson	[2]
18	Rambabu Gudavalli	[2]
19	Alessandro Guffanti	[8]
20	William N. Hunter	[2]
21	Ottaviano Incani	[20]
22	Bernhard Küster	[2]
23	Ivica Letunic	[2]
24	Rune Linding	[2]
25	Paolo Marcatili	[18]
26	David M. A. Martin	[2]
27	Vincenza Maselli	[2]
28	Morten Mattingsdal	[2]
29	Giancarlo Mauri	[8]
30	Caroline McGuigan	[2]
31	Luciano Milanesi	[8]
32	Daniele Peluso	[5] [12] [13] [15]
33	Graziano Pesole	[8] [17] [19]
34	Pål Puntervoll	[2]
35	Chenna Ramu	[2]
36	Emanuele de Rinaldis	[13]
37	Leszek Rychlewski	[2]
38	Cecilia Saccone	[8]
39	Giulio Superti-Furga	[2]
40	Gianpaolo Scalia Tomba	[16]
41	Anna Tramontano	[18]
42	Giorgio Valle	[8]
43	Allegra Via	[2] [4] [5] [6] [7] [10] [11] [12] [13] [14] [15] [16] [18]
44	Lucjan Stanislaw Wyrwicz	[2]
45	Andreas Zanzoni	[3] [5] [6] [9] [14]

Colors in the list of coauthors