Martin C. Herbordt

	2009
40		Martin C. Herbordt, Md. Ashfaquzzaman Khan, Tony Dean: Parallel Discrete Event Simulation of Molecular Dynamics Through Event-Based Decomposition. ASAP 2009: 129-136
39		Bharat Sukhwani, Martin C. Herbordt: GPU acceleration of a production molecular docking code. GPGPU 2009: 19-27
38		Tom Van Court, Martin C. Herbordt: Elements of High-Performance Reconfigurable Computing. Advances in Computers 75: 113-157 (2009)
	2008
37		Martin C. Herbordt, Francois Kosie, Josh Model: An Efficient O(1) Priority Queue for Large FPGA-Based Discrete Event Simulations of Molecular Dynamics. FCCM 2008: 248-257
36		Bharat Sukhwani, Martin C. Herbordt: Acceleration of a production rigid molecule docking code. FPL 2008: 341-346
35		Yongfeng Gu, Tom Van Court, Martin C. Herbordt: Explicit design of FPGA-based coprocessors for short-range force computations in molecular dynamics simulations. Parallel Computing 34(4-5): 261-277 (2008)
34		Yongfeng Gu, Tom Van Court, Martin C. Herbordt: Explicit design of FPGA-based coprocessors for short-range force computations in molecular dynamics simulations. Parallel Computing 34(4-5): 261-277 (2008)
	2007
33		Yongfeng Gu, Martin C. Herbordt: FPGA-Based Multigrid Computation for Molecular Dynamics Simulations. FCCM 2007: 117-126
32		Josh Model, Martin C. Herbordt: Discrete Event Simulation of Molecular Dynamics with Configurable Logic. FPL 2007: 151-158
31		Martin C. Herbordt, Tom Van Court, Yongfeng Gu, Bharat Sukhwani, Al Conti, Josh Model, Douglas DiSabello: Achieving High Performance with FPGA-Based Computing. IEEE Computer 40(3): 50-57 (2007)
30		Tom Van Court, Martin C. Herbordt: Families of FPGA-based accelerators for approximate string matching. Microprocessors and Microsystems 31(2): 135-145 (2007)
29		Martin C. Herbordt, Josh Model, Bharat Sukhwani, Yongfeng Gu, Tom Van Court: Single pass streaming BLAST on FPGAs. Parallel Computing 33(10-11): 741-756 (2007)
	2006
28		Martin C. Herbordt, Josh Model, Yongfeng Gu, Bharat Sukhwani, Tom Van Court: Single Pass, BLAST-Like, Approximate String Matching on FPGAs. FCCM 2006: 217-226
27		Tom Van Court, Martin C. Herbordt: Application-Specific Memory Interleaving Enables High Performance in FPGA-based Grid Computations. FCCM 2006: 305-306
26		Yongfeng Gu, Tom Van Court, Martin C. Herbordt: Integrating FPGA Acceleration into the Protomol Molecular Dynamics Code: Preliminary Report. FCCM 2006: 315-316
25		Tom Van Court, Martin C. Herbordt: Sizing of Processing Arrays for FPGA-Based Computation. FPL 2006: 1-6
24		Tom Van Court, Martin C. Herbordt: Application-Specific Memory Interleaving for FPGA-Based Grid Computations: A General Design Technique. FPL 2006: 1-7
23		Yongfeng Gu, Tom Van Court, Martin C. Herbordt: Improved Interpolation and System Integration for FPGA-Based Molecular Dynamics Simulations. FPL 2006: 1-8
	2005
22		Tom Van Court, Yongfeng Gu, Martin C. Herbordt: Three-Dimensional Template Correlation: Object Recognition in 3D Voxel Data. CAMP 2005: 153-158
21		Yongfeng Gu, Tom Van Court, Douglas DiSabello, Martin C. Herbordt: Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations. FCCM 2005: 269-270
20		Yongfeng Gu, Tom Van Court, Martin C. Herbordt: Accelerating Molecular Dynamics Simulations With Configurable Circuits. FPL 2005: 475-480
19		Tom Van Court, Martin C. Herbordt: LAMP: A Tool Suite for Families of FPGA-Based Application Accelerators. FPL 2005: 612-617
	2004
18		Tom Van Court, Martin C. Herbordt: Families of FPGA-Based Algorithms for Approximate String Matching. ASAP 2004: 354-364
17		Tom Van Court, Yongfeng Gu, Martin C. Herbordt: FPGA Acceleration of Rigid Molecule Interactions. FCCM 2004: 300-301
16		Albert A. Conti, Tom Van Court, Martin C. Herbordt: Processing Repetitive Sequence Structures with Mismatches at Streaming Rate. FPL 2004: 1080-1083
15		Tom Van Court, Yongfeng Gu, Martin C. Herbordt: FPGA Acceleration of Rigid Molecule Interactions. FPL 2004: 862-867
14		Martin C. Herbordt, Jade Cravy, Honghai Zhang: Array control for high-performance SIMD systems. J. Parallel Distrib. Comput. 64(3): 400-413 (2004)
13		Tom Van Court, Martin C. Herbordt, Richard J. Barton: Case study of a functional genomics application for an FPGA-based coprocessor. Microprocessors and Microsystems 28(5-6): 213-222 (2004)
	2003
12		Tom Van Court, Martin C. Herbordt, Richard J. Barton: Case Study of a Functional Genomics Application. FPL 2003: 365-374
	2000
11		Martin C. Herbordt, Honghai Zhang, Calvin Lin, Hong Rao, Jade Cravy: Control for High-Speed PE Arrays. ASAP 2000: 247-257
10		Martin C. Herbordt, Jade Cravy, Honghai Zhang, Calvin Lin, Hong Rao: An Array Control Unit for High Performance SIMD Arrays. CAMP 2000: 293-301
9		Martin C. Herbordt, Jade Cravy, Renoy Sam, Owais Kidwai, Calvin Lin: A System for Evaluating Performance and Cost of SIMD Array Designs. J. Parallel Distrib. Comput. 60(2): 217-246 (2000)
	1999
8		Bojana Obrenic, Martin C. Herbordt, Arnold L. Rosenberg, Charles C. Weems: Using Emulations to Enhance the Performance of Parallel Architectures. IEEE Trans. Parallel Distrib. Syst. 10(10): 1067-1081 (1999)
	1997
7		Martin C. Herbordt, Owais Kidwai, Charles C. Weems: Preprototyping SIMD Coprocessors Using Virtual Machine Emulation and Trace Compilation. SIGMETRICS 1997: 88-99
	1995
6		Martin C. Herbordt, Charles C. Weems: An empirical study of datapath, memory hierarchy, and network in SIMD array architectures. ICCD 1995: 546-551
5		Martin C. Herbordt, Charles C. Weems: Experimental Analysis of Some SIMD Array Memory Hierarchies. ICPP (1) 1995: 210-214
4		Martin C. Herbordt, Charles C. Weems: Enpassant: An Environment for Evaluating Massively Parallel Array Architectures for Spatially Mapped Applications. IJPRAI 9(2): 175-200 (1995)
	1994
3		Martin C. Herbordt, James C. Corbett, Charles C. Weems, John Spalding: Practical Algorithms for Online Routing on Fixed and Reconfigurable Meshes. J. Parallel Distrib. Comput. 20(3): 341-356 (1994)
	1991
2		Martin C. Herbordt, Charles C. Weems: Multi-associativity: A Framework for Solving Multiple Non-uniform Problem Instances Simultaneously on SIMD Arrays. ICPP (3) 1991: 219-223
	1990
1		Martin C. Herbordt, Charles C. Weems, James C. Corbett: Message-Passing Algorithms for a SIMD Torus with Coteries. SPAA 1990: 11-20

Coauthor Index

1	Richard J. Barton	[12] [13]
2	Al Conti	[31]
3	Albert A. Conti	[16]
4	James C. Corbett	[1] [3]
5	Tom Van Court	[12] [13] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [34] [35] [38]
6	Jade Cravy	[9] [10] [11] [14]
7	Tony Dean	[40]
8	Douglas DiSabello	[21] [31]
9	Yongfeng Gu	[15] [17] [20] [21] [22] [23] [26] [28] [29] [31] [33] [34] [35]
10	Md. Ashfaquzzaman Khan	[40]
11	Owais Kidwai	[7] [9]
12	Francois Kosie	[37]
13	Calvin Lin	[9] [10] [11]
14	Josh Model	[28] [29] [31] [32] [37]
15	Bojana Obrenic	[8]
16	Hong Rao	[10] [11]
17	Arnold L. Rosenberg	[8]
18	Renoy Sam	[9]
19	John Spalding	[3]
20	Bharat Sukhwani	[28] [29] [31] [36] [39]
21	Charles C. Weems	[1] [2] [3] [4] [5] [6] [7] [8]
22	Honghai Zhang	[10] [11] [14]

Colors in the list of coauthors