Desmond G. Higgins

	2008
28		Gordon Blackshields, Mark Larkin, Iain M. Wallace, Andreas Wilm, Desmond G. Higgins: Fast embedding methods for clustering tens of thousands of sequences. Computational Biology and Chemistry 32(4): 282-286 (2008)
27		Sébastien Moretti, Andreas Wilm, Desmond G. Higgins, Ioannis Xenarios, Cédric Notredame: R-Coffee: a web server for accurately aligning noncoding RNA sequences. Nucleic Acids Research 36(Web-Server-Issue): 10-13 (2008)
	2007
26		Iain M. Wallace, Desmond G. Higgins: Supervised multivariate analysis of sequence groups to identify specificity determining residues. BMC Bioinformatics 8: (2007)
25		M. A. Larkin, Gordon Blackshields, N. P. Brown, R. Chenna, Paul A. McGettigan, Hamish McWilliam, Franck Valentin, Iain M. Wallace, Andreas Wilm, Rodrigo Lopez, Julie Dawn Thompson, Toby J. Gibson, Desmond G. Higgins: Clustal W and Clustal X version 2.0. Bioinformatics 23(21): 2947-2948 (2007)
24		Ian B. Jeffery, Stephen F. Madden, Paul A. McGettigan, Guy Perrière, Aedín C. Culhane, Desmond G. Higgins: Integrating transcription factor binding site information with gene expression datasets. Bioinformatics 23(3): 298-305 (2007)
23		Sébastien Moretti, Fabrice Armougom, Iain M. Wallace, Desmond G. Higgins, C. Victor Jongeneel, Cédric Notredame: The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods. Nucleic Acids Research 35(Web-Server-Issue): 645-648 (2007)
	2006
22		Ian B. Jeffery, Desmond G. Higgins, Aedín C. Culhane: Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data. BMC Bioinformatics 7: 359 (2006)
21		Fabrice Armougom, Olivier Poirot, Sébastien Moretti, Desmond G. Higgins, Phillip Bucher, Vladimir Keduas, Cédric Notredame: APDB: a web server to evaluate the accuracy of sequence alignments using structural information. Bioinformatics 22(19): 2439-2440 (2006)
	2005
20		Aedín C. Culhane, Jean Thioulouse, Guy Perrière, Desmond G. Higgins: MADE4: an R package for multivariate analysis of gene expression data. Bioinformatics 21(11): 2789-2790 (2005)
19		Iain M. Wallace, Orla O'Sullivan, Desmond G. Higgins: Evaluation of iterative alignment algorithms for multiple alignment. Bioinformatics 21(8): 1408-1414 (2005)
	2003
18		Steven David Prestwich, Desmond G. Higgins, Orla O'Sullivan: A SAT-Based Approach to Multiple Sequence Alignment. CP 2003: 940-944
17		Orla O'Sullivan, Mark Zehnder, Desmond G. Higgins, Philipp Bucher, Aurelien Grosdidier, Cédric Notredame: APDB: a novel measure for benchmarking sequence alignment methods without reference alignments. ISMB (Supplement of Bioinformatics) 2003: 215-221
16		Aedín C. Culhane, Guy Perrière, Desmond G. Higgins: Cross-platform comparison and visualisation of gene expression data using co-inertia analysis. BMC Bioinformatics 4: 59 (2003)
15		Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson: Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Research 31(13): 3497-3500 (2003)
	2002
14		Aedín C. Culhane, Guy Perrière, Elizabeth C. Considine, Thomas G. Cotter, Desmond G. Higgins: Between-group analysis of microarray data. Bioinformatics 18(12): 1600-1608 (2002)
	1999
13		P. Thebault, P. Monestie, A. McGrath, Desmond G. Higgins: MIAH: automatic alignment of eukaryotic SSU rRNAs. Bioinformatics 15(4): 341-342 (1999)
	1998
12		Emmet A. O'Brien, Desmond G. Higgins: Empirical estimation of the reliability of ribosomal RNA alignments. Bioinformatics 14(10): 830-838 (1998)
11		Emmet A. O'Brien, Cédric Notredame, Desmond G. Higgins: Optimization of ribosomal RNA profile alignments. Bioinformatics 14(4): 332-341 (1998)
10		Cédric Notredame, Liisa Holm, Desmond G. Higgins: COFFEE: an objective function for multiple sequence alignments. Bioinformatics 14(5): 407-422 (1998)
	1994
9		Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson: Improved sensitivity of profile searches through the use of sequence weights and gap excision. Computer Applications in the Biosciences 10(1): 19-29 (1994)
	1993
8		Catherine M. Rice, Rainer Fuchs, Desmond G. Higgins, Peter Stoehr, Graham Cameron: The EMBL data library. Nucleic Acids Research 21(13): 2967-2971 (1993)
	1992
7		Desmond G. Higgins: Sequence ordinations: a multivariate analysis approach to analysing large sequence data sets. Computer Applications in the Biosciences 8(1): 15-22 (1992)
6		Desmond G. Higgins, Peter Stoehr: EMBLSCAN: fast approximate DNA database searches on compact disc. Computer Applications in the Biosciences 8(2): 137-139 (1992)
5		Desmond G. Higgins, Alan J. Bleasby, Rainer Fuchs: CLUSTAL V: improved software for multiple sequence alignment. Computer Applications in the Biosciences 8(2): 189-191 (1992)
4		Denis C. Shields, Desmond G. Higgins, P. M. Sharp: GCWIND: a microcomputer program for identifying open reading frames according to codon positional G+C content. Computer Applications in the Biosciences 8(5): 521-523 (1992)
3		J. Heringa, H. Sommerfeldt, Desmond G. Higgins, P. Argos: OBSTRUCT: a program to obtain largest cliques from a protein sequence set according to structural resolution and sequence similarity. Computer Applications in the Biosciences 8(6): 599-600 (1992)
	1989
2		Desmond G. Higgins, P. M. Sharp: Fast and sensitive multiple sequence alignments on a microcomputer. Computer Applications in the Biosciences 5(2): 151-153 (1989)
	1987
1		Desmond G. Higgins, Manolo Gouy: Interfacing similarity search software with the sequence retrieval system ACNUC. Computer Applications in the Biosciences 3(3): 239-241 (1987)

Coauthor Index

1	P. Argos	[3]
2	Fabrice Armougom	[21] [23]
3	Gordon Blackshields	[25] [28]
4	Alan J. Bleasby	[5]
5	N. P. Brown	[25]
6	Philipp Bucher	[17]
7	Phillip Bucher	[21]
8	Graham Cameron	[8]
9	R. Chenna	[25]
10	Elizabeth C. Considine	[14]
11	Thomas G. Cotter	[14]
12	Aedín C. Culhane	[14] [16] [20] [22] [24]
13	Rainer Fuchs	[5] [8]
14	Toby J. Gibson	[9] [15] [25]
15	Manolo Gouy	[1]
16	Aurelien Grosdidier	[17]
17	J. Heringa	[3]
18	Liisa Holm	[10]
19	Ian B. Jeffery	[22] [24]
20	C. Victor Jongeneel	[23]
21	Vladimir Keduas	[21]
22	Tadashi Koike	[15]
23	M. A. Larkin	[25]
24	Mark Larkin	[28]
25	Rodrigo Lopez	[15] [25]
26	Stephen F. Madden	[24]
27	Paul A. McGettigan	[24] [25]
28	A. McGrath	[13]
29	Hamish McWilliam	[25]
30	P. Monestie	[13]
31	Sébastien Moretti	[21] [23] [27]
32	Cédric Notredame	[10] [11] [17] [21] [23] [27]
33	Emmet A. O'Brien	[11] [12]
34	Orla O'Sullivan	[17] [18] [19]
35	Guy Perrière	[14] [16] [20] [24]
36	Olivier Poirot	[21]
37	Steven David Prestwich	[18]
38	Chenna Ramu	[15]
39	Catherine M. Rice	[8]
40	P. M. Sharp	[2] [4]
41	Denis C. Shields	[4]
42	H. Sommerfeldt	[3]
43	Peter Stoehr	[6] [8]
44	Hideaki Sugawara	[15]
45	P. Thebault	[13]
46	Jean Thioulouse	[20]
47	Julie Dawn Thompson (Julie D. Thompson)	[9] [15] [25]
48	Franck Valentin	[25]
49	Iain M. Wallace	[19] [23] [25] [26] [28]
50	Andreas Wilm	[25] [27] [28]
51	Ioannis Xenarios	[27]
52	Mark Zehnder	[17]

Colors in the list of coauthors