Eric P. Hoffman

	2009
23		Bai Zhang, Huai Li, Rebecca B. Riggins, Ming Zhan, Jianhua Xuan, Zhen Zhang, Eric P. Hoffman, Robert Clarke, Yue Wang: Differential dependency network analysis to identify condition-specific topological changes in biological networks. Bioinformatics 25(4): 526-532 (2009)
22		Li Chen, Jianhua Xuan, Yue Wang, Eric P. Hoffman, Rebecca B. Riggins, Robert Clarke: Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis. I. J. Computational Biology and Drug Design 2(1): 1-20 (2009)
21		Bo Hyoung Kim, Bongshin Lee, Susan Knoblach, Eric P. Hoffman, Jinwook Seo: GeneShelf: A Web-based Visual Interface for Large Gene Expression Time-Series Data Repositories. IEEE Trans. Vis. Comput. Graph. 15(6): 905-912 (2009)
	2008
20		Chen Wang, Jianhua Xuan, Li Chen, Eric P. Hoffman, Robert Clarke: Reliability Analysis of Transcriptional Regulatory Networks. BCBGC 2008: 42-48
19		Jianghui Xiong, Chen Wang, Bai Zhang, Yue Wang, Eric P. Hoffman, Robert Clarke, Jianhua Xuan: Inferring Condition-Specific miRNA-Gene Modules from miRNA and mRNA Profiling Data. BCBGC 2008: 49-55
18		Ting Gong, Jianhua Xuan, Rebecca B. Riggins, Yue Wang, Eric P. Hoffman, Robert Clarke: Exploring Transcriptional Modules Through Integrative Gene Clustering Guided by Transcription Factor Binding Information. BIOCOMP 2008: 191-197
17		Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Wang, Eric P. Hoffman, Robert Clarke: Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis. BIOCOMP 2008: 23-28
16		Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wang, Robert Clarke, Eric P. Hoffman: Integrative Network Component Analysis for Regulatory Network Reconstruction. ISBRA 2008: 196-207
15		Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggins, Yue Wang, Eric P. Hoffman, Robert Clarke: Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information. ISBRA 2008: 244-255
14		Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Wang, Robert Clarke, Eric P. Hoffman: Motif-directed network component analysis for regulatory network inference. BMC Bioinformatics 9(S-1): (2008)
13		Yitan Zhu, Huai Li, David J. Miller, Zuyi Wang, Jianhua Xuan, Robert Clarke, Eric P. Hoffman, Yue Wang: caBIGTM VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data. BMC Bioinformatics 9: (2008)
	2007
12		Chen Wang, Jianhua Xuan, Ting Gong, Robert Clarke, Eric P. Hoffman, Yue Wang: Stability-Based Dimension Estimation of ICA with Application to Microarray Data Analysis. BIOCOMP 2007: 132-138
	2006
11		Justin Molineaux, Jianhua Xuan, Ting Gong, Yitan Zhu, Eric P. Hoffman, Robert Clarke, Yue Wang: ModVis: An information visualization tool for gene module discovery. CAINE 2006: 24-31
10		Jinwook Seo, Eric P. Hoffman: Probe set algorithms: is there a rational best bet? BMC Bioinformatics 7: 395 (2006)
9		Zuyi Wang, Yue Wang, Jianhua Xuan, Yibin Dong, Marina Bakay, Yuanjian Feng, Robert Clarke, Eric P. Hoffman: Optimized multilayer perceptrons for molecular classification and diagnosis using genomic data. Bioinformatics 22(6): 755-761 (2006)
8		Jinwook Seo, Heather Gordish-Dressman, Eric P. Hoffman: An interactive power analysis tool for microarray hypothesis testing and generation. Bioinformatics 22(7): 808-814 (2006)
	2005
7		Jianhua Xuan, Eric P. Hoffman, Robert Clarke, Yue Wang: Normalization of Microarray Data by Iterative Nonlinear Regression. BIBE 2005: 267-270
	2004
6		Jianhua Xuan, Yibin Dong, Javed I. Khan, Eric P. Hoffman, Robert Clarke, Yue Wang: Robust Feature Selection by Weighted Fisher Criterion for Multiclass Prediction in Gene Expression Profiling. ICPR (2) 2004: 291-294
5		Jinwook Seo, Marina Bakay, Yi-Wen Chen, Sara Hilmer, Ben Shneiderman, Eric P. Hoffman: Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays. Bioinformatics 20(16): 2534-2544 (2004)
4		Josephine Chen, Po Zhao, Donald Massaro, Linda B. Clerch, Richard R. Almon, Debra C. DuBois, William J. Jusko, Eric P. Hoffman: The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface. Nucleic Acids Research 32(Database-Issue): 578-581 (2004)
	2002
3		Rehannah H. A. Borup, Stefano Toppo, Yi-Wen Chen, Tanya M. Teslovich, Gerolamo Lanfranchi, Giorgio Valle, Eric P. Hoffman: Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs. BMC Bioinformatics 3: 33 (2002)
2		Marina Bakay, Yi-Wen Chen, Rehannah H. A. Borup, Po Zhao, Kanneboyina Nagaraju, Eric P. Hoffman: Sources of variability and effect of experimental approach on expression profiling data interpretation. BMC Bioinformatics 3: 4 (2002)
	1994
1		Dhiraj K. Pathak, Eric P. Hoffman, Mark Perlin: Intelligent DNA-Based Molecular Diagnostics Using Linked Genetic Markers. ISMB 1994: 331-339

Coauthor Index

1	Richard R. Almon	[4]
2	Marina Bakay	[2] [5] [9]
3	Rehannah H. A. Borup	[2] [3]
4	Josephine Chen	[4]
5	Li Chen	[14] [15] [16] [17] [20] [22]
6	Yi-Wen Chen	[2] [3] [5]
7	Robert Clarke	[6] [7] [9] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [22] [23]
8	Linda B. Clerch	[4]
9	Yibin Dong	[6] [9]
10	Debra C. DuBois	[4]
11	Yuanjian Feng	[9]
12	Ting Gong	[11] [12] [15] [18]
13	Heather Gordish-Dressman	[8]
14	Sara Hilmer	[5]
15	William J. Jusko	[4]
16	Javed I. Khan	[6]
17	Bo Hyoung Kim	[21]
18	Susan Knoblach	[21]
19	Gerolamo Lanfranchi	[3]
20	Bongshin Lee	[21]
21	Huai Li	[13] [23]
22	Donald Massaro	[4]
23	David J. Miller	[13]
24	Justin Molineaux	[11]
25	Kanneboyina Nagaraju	[2]
26	Dhiraj K. Pathak	[1]
27	Mark Perlin	[1]
28	Rebecca B. Riggins	[15] [17] [18] [22] [23]
29	Jinwook Seo	[5] [8] [10] [21]
30	Ben Shneiderman	[5]
31	Tanya M. Teslovich	[3]
32	Stefano Toppo	[3]
33	Giorgio Valle	[3]
34	Chen Wang	[12] [14] [16] [19] [20]
35	Yue Wang	[6] [7] [9] [11] [12] [13] [14] [15] [16] [17] [18] [19] [22] [23]
36	Zuyi Wang	[9] [13]
37	Jianghui Xiong	[19]
38	Jianhua Xuan	[6] [7] [9] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [22] [23]
39	Ming Zhan	[23]
40	Bai Zhang	[19] [23]
41	Zhen Zhang	[23]
42	Po Zhao	[2] [4] [14] [16]
43	Yitan Zhu	[11] [13]

Colors in the list of coauthors