Fereydoun Hormozdiari

	2011
15		Can Alkan, Emidio Capriotti, Eleazar Eskin, Fereydoun Hormozdiari, Maricel G. Kann: Session Introduction. Pacific Symposium on Biocomputing 2011: 229-230
14		Fereydoun Hormozdiari, Iman Hajirasouliha, Andrew McPherson, Evan E. Eichler, Süleyman Cenk Sahinalp: Simultaneous Structural Variation Discovery in Multiple Paired-End Sequenced Genomes. RECOMB 2011: 104-105
13		Andrew McPherson, Chunxiao Wu, Iman Hajirasouliha, Fereydoun Hormozdiari, Faraz Hach, Anna Lapuk, Stanislav Volik, Sohrab P. Shah, Colin Collins, Süleyman Cenk Sahinalp: Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data. Bioinformatics 27(11): 1481-1488 (2011)
12		Andrew McPherson, Fereydoun Hormozdiari, Abdalnasser Zayed, Ryan Giuliany, Gavin Ha, Mark G. F. Sun, Malachi Griffith, Alireza Heravi Moussavi, Janine Senz, Nataliya Melnyk, Marina Pacheco, Marco A. Marra, Martin Hirst, Torsten O. Nielsen, Süleyman Cenk Sahinalp, David G. Huntsman, Sohrab P. Shah: deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data. PLoS Computational Biology 7(5): (2011)
	2010
11		Iman Hajirasouliha, Fereydoun Hormozdiari, Can Alkan, Jeffrey M. Kidd, Inanç Birol, Evan E. Eichler, Süleyman Cenk Sahinalp: Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. Bioinformatics 26(10): 1277-1283 (2010)
10		Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach, Deniz Yörükoglu, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp: Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery. Bioinformatics [ISMB] 26(12): 350-357 (2010)
	2009
9		Recep Colak, Fereydoun Hormozdiari, Flavia Moser, Alexander Schönhuth, J. Holman, Martin Ester, Süleyman Cenk Sahinalp: Dense Graphlet Statistics of Protein Interaction and Random Networks. Pacific Symposium on Biocomputing 2009: 178-189
8		Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp: Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes. RECOMB 2009: 218-219
7		Phuong Dao, Alexander Schönhuth, Fereydoun Hormozdiari, Iman Hajirasouliha, Süleyman Cenk Sahinalp, Martin Ester: Quantifying Systemic Evolutionary Changes by Color Coding Confidence-Scored PPI Networks. WABI 2009: 37-48
	2008
6		Noga Alon, Phuong Dao, Iman Hajirasouliha, Fereydoun Hormozdiari, Süleyman Cenk Sahinalp: Biomolecular network motif counting and discovery by color coding. ISMB 2008: 241-249
5		Iman Hajirasouliha, Fereydoun Hormozdiari, Süleyman Cenk Sahinalp, Inanç Birol: Optimal pooling for genome re-sequencing with ultra-high-throughput short-read technologies. ISMB 2008: 32-40
4		Raheleh Salari, Alexander Schönhuth, Fereydoun Hormozdiari, Artem Cherkasov, Süleyman Cenk Sahinalp: The Relation between Indel Length and Functional Divergence: A Formal Study. WABI 2008: 330-341
	2007
3		Simon K. Chan, Michael Hsing, Fereydoun Hormozdiari, Artem Cherkasov: Relationship between insertion/deletion (indel) frequency of proteins and essentiality. BMC Bioinformatics 8: (2007)
2		Fereydoun Hormozdiari, Petra Berenbrink, Natasa Przulj, Süleyman Cenk Sahinalp: Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution. PLoS Computational Biology 3(7): (2007)
	2006
1		Fereydoun Hormozdiari, Petra Berenbrink, Natasa Przulj, Süleyman Cenk Sahinalp: Not All Scale Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Emulation. Systems Biology and Computational Proteomics 2006: 1-13

Coauthor Index

1	Can Alkan	[8] [10] [11] [15]
2	Noga Alon	[6]
3	Petra Berenbrink	[1] [2]
4	Inanç Birol	[5] [11]
5	Emidio Capriotti	[15]
6	Simon K. Chan	[3]
7	Artem Cherkasov	[3] [4]
8	Recep Colak	[9]
9	Colin Collins	[13]
10	Phuong Dao	[6] [7] [10]
11	Evan E. Eichler	[8] [10] [11] [14]
12	Eleazar Eskin	[15]
13	Martin Ester	[7] [9]
14	Ryan Giuliany	[12]
15	Malachi Griffith	[12]
16	Gavin Ha	[12]
17	Faraz Hach	[10] [13]
18	Iman Hajirasouliha	[5] [6] [7] [10] [11] [13] [14]
19	Martin Hirst	[12]
20	J. Holman	[9]
21	Michael Hsing	[3]
22	David G. Huntsman	[12]
23	Maricel G. Kann	[15]
24	Jeffrey M. Kidd	[11]
25	Anna Lapuk	[13]
26	Marco A. Marra	[12]
27	Andrew McPherson	[12] [13] [14]
28	Nataliya Melnyk	[12]
29	Flavia Moser	[9]
30	Alireza Heravi Moussavi	[12]
31	Torsten O. Nielsen	[12]
32	Marina Pacheco	[12]
33	Natasa Przulj	[1] [2]
34	Süleyman Cenk Sahinalp	[1] [2] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14]
35	Raheleh Salari	[4]
36	Alexander Schönhuth	[4] [7] [9]
37	Janine Senz	[12]
38	Sohrab P. Shah	[12] [13]
39	Mark G. F. Sun	[12]
40	Stanislav Volik	[13]
41	Chunxiao Wu	[13]
42	Deniz Yörükoglu	[10]
43	Abdalnasser Zayed	[12]

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