Xiaoqiu Huang

	2009
23		Ankit Agrawal, Xiaoqiu Huang: Pairwise statistical significance of local sequence alignment using multiple parameter sets and empirical justification of parameter set change penalty. BMC Bioinformatics 10(S-3): (2009)
22		Ankit Agrawal, Xiaoqiu Huang: PSIBLAST_PairwiseStatSig: reordering PSI-BLAST hits using pairwise statistical significance. Bioinformatics 25(8): 1082-1083 (2009)
	2008
21		Ankit Agrawal, Xiaoqiu Huang: Pairwise statistical significance of local sequence alignment using multiple parameter sets. DTMBIO 2008: 53-60
20		Ankit Agrawal, Xiaoqiu Huang: DNAlignTT: Pairwise DNA alignment with sequence specific transition-transversion ratio. EIT 2008: 453-455
19		Ankit Agrawal, Volker Brendel, Xiaoqiu Huang: Pairwise Statistical Significance Versus Database Statistical Significance for Local Alignment of Protein Sequences. ISBRA 2008: 50-61
18		Ankit Agrawal, Arka P. Ghosh, Xiaoqiu Huang: Estimating Pairwise Statistical Significance of Protein Local Alignments Using a Clustering-Classification Approach Based on Amino Acid Composition. ISBRA 2008: 62-73
17		Ankit Agrawal, Volker Brendel, Xiaoqiu Huang: Pairwise statistical significance and empirical determination of effective gap opening penalties for protein local sequence alignment. I. J. Computational Biology and Drug Design 1(4): 347-367 (2008)
16		Xiaoqiu Huang: Sequence Alignment with an Appropriate Substitution Matrix. Journal of Computational Biology 15(2): 129-138 (2008)
	2005
15		Jianmin Wang, Xiaoqiu Huang: A method for finding single-nucleotide polymorphisms with allele frequencies in sequences of deep coverage. BMC Bioinformatics 6: 220 (2005)
	2004
14		I-Hsuan Yang, Sheng-Ho Wang, Yang-Ho Chen, Pao-Hsian Huang, Liang Ye, Xiaoqiu Huang, Kun-Mao Chao: Efficient Methods for Generating Optimal Single and Multiple Spaced Seeds. BIBE 2004: 411-418
13		Xiaoqiu Huang, Liang Ye, I-Hsuan Yang, Kun-Mao Chao: A Sensitive Sequence Comparison Method. SNPD 2004: 77-80
12		Xiaoqiu Huang, Liang Ye, Hui-Hsien Chou, I-Hsuan Yang, Kun-Mao Chao: Efficient combination of multiple word models for improved sequence comparison. Bioinformatics 20(16): 2529-2533 (2004)
	2003
11		Yaw-Ling Lin, Xiaoqiu Huang, Tao Jiang, Kun-Mao Chao: MAVG: locating non-overlapping maximum average segments in a given sequence. Bioinformatics 19(1): 151-152 (2003)
10		Xiaoqiu Huang, Kun-Mao Chao: A generalized global alignment algorithm. Bioinformatics 19(2): 228-233 (2003)
9		Geo Pertea, Xiaoqiu Huang, Feng Liang, Valentin Antonescu, Razvan Sultana, Svetlana Karamycheva, Yuandan Lee, Joseph White, Foo Cheung, Babak Parvizi, Jennifer Tsai, John Quackenbush: TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19(5): 651-652 (2003)
8		Natsuhiko Futamura, Srinivas Aluru, Xiaoqiu Huang: Parallel Syntenic Alignments. Parallel Processing Letters 13(4): 689-703 (2003)
	2002
7		Natsuhiko Futamura, Srinivas Aluru, Xiaoqiu Huang: Parallel Syntenic Alignments. HiPC 2002: 420-430
	1994
6		Xiaoqiu Huang: A Context Dependent Method for Comparing Sequences. CPM 1994: 54-63
5		Xiaoqiu Huang, Pavel A. Pevzner, Webb Miller: Parametric Recomuting in Alignment Graphs. CPM 1994: 87-101
	1992
4		Xiaoqiu Huang, Webb Miller, Scott Schwartz, Ross C. Hardison: Parallelization of a local similarity algorithm. Computer Applications in the Biosciences 8(2): 155-165 (1992)
	1990
3		Xiaoqiu Huang: Computing Local Sequence Similarities on a Hypercube. ICPP (3) 1990: 360-361
2		Xiaoqiu Huang, Ross C. Hardison, Webb Miller: A space-efficient algorithm for local similarities. Computer Applications in the Biosciences 6(4): 373-381 (1990)
	1988
1		Xiaoqiu Huang: A Lower Bound for the Edit-Distance Problem Under an Arbitrary Cost Function. Inf. Process. Lett. 27(6): 319-321 (1988)

Coauthor Index

1	Ankit Agrawal	[17] [18] [19] [20] [21] [22] [23]
2	Srinivas Aluru	[7] [8]
3	Valentin Antonescu	[9]
4	Volker Brendel	[17] [19]
5	Kun-Mao Chao	[10] [11] [12] [13] [14]
6	Yang-Ho Chen	[14]
7	Foo Cheung	[9]
8	Hui-Hsien Chou	[12]
9	Natsuhiko Futamura	[7] [8]
10	Arka P. Ghosh	[18]
11	Ross C. Hardison	[2] [4]
12	Pao-Hsian Huang	[14]
13	Tao Jiang	[11]
14	Svetlana Karamycheva	[9]
15	Yuandan Lee	[9]
16	Feng Liang	[9]
17	Yaw-Ling Lin	[11]
18	Webb Miller	[2] [4] [5]
19	Babak Parvizi	[9]
20	Geo Pertea	[9]
21	Pavel A. Pevzner	[5]
22	John Quackenbush	[9]
23	Scott Schwartz	[4]
24	Razvan Sultana	[9]
25	Jennifer Tsai	[9]
26	Jianmin Wang	[15]
27	Sheng-Ho Wang	[14]
28	Joseph White	[9]
29	I-Hsuan Yang	[12] [13] [14]
30	Liang Ye	[12] [13] [14]

Colors in the list of coauthors