 | 2008 |
| 16 |  | Myron Peto,
Andrzej Kloczkowski,
Vasant Honavar,
Robert L. Jernigan:
Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable.
BMC Bioinformatics 9: (2008) |
| 15 |  | Feng Cui,
Robert L. Jernigan,
Zhijun Wu:
Knowledge-Based versus experimentally Acquired Distance and Angle Constraints for NMR Structure Refinement.
J. Bioinformatics and Computational Biology 6(2): 283-300 (2008) |
| 2007 |
| 14 |  | Haitao Cheng,
Taner Z. Sen,
Robert L. Jernigan,
Andrzej Kloczkowski:
Consensus Data Mining (CDM) Protein Secondary Structure Prediction Server: Combining GOR V and Fragment Database Mining (FDM).
Bioinformatics 23(19): 2628-2630 (2007) |
| 13 |  | Di Wu,
Feng Cui,
Robert L. Jernigan,
Zhijun Wu:
PIDD: database for Protein Inter-atomic Distance Distributions.
Nucleic Acids Research 35(Database-Issue): 202-207 (2007) |
| 12 |  | Michael Terribilini,
Jeffry D. Sander,
Jae-Hyung Lee,
Peter Zaback,
Robert L. Jernigan,
Vasant Honavar,
Drena Dobbs:
RNABindR: a server for analyzing and predicting RNA-binding sites in proteins.
Nucleic Acids Research 35(Web-Server-Issue): 578-584 (2007) |
| 2006 |
| 11 |  | Michael Terribilini,
Jae-Hyung Lee,
Changhui Yan,
Robert L. Jernigan,
Susan Carpenter:
Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and RNA Binding Sites in Rev Proteins of HIV-1 and EIAV Agree with Experimental Data.
Pacific Symposium on Biocomputing 2006: 415-426 |
| 10 |  | Changhui Yan,
Michael Terribilini,
Feihong Wu,
Robert L. Jernigan,
Drena Dobbs,
Vasant Honavar:
Predicting DNA-binding sites of proteins from amino acid sequence.
BMC Bioinformatics 7: 262 (2006) |
| 9 |  | Taner Z. Sen,
Andrzej Kloczkowski,
Robert L. Jernigan:
Functional clustering of yeast proteins from the protein-protein interaction network.
BMC Bioinformatics 7: 355 (2006) |
| 2005 |
| 8 |  | Taner Z. Sen,
Robert L. Jernigan,
Jean Garnier,
Andrzej Kloczkowski:
GOR V server for protein secondary structure prediction.
Bioinformatics 21(11): 2787-2788 (2005) |
| 7 |  | Michael Terribilini,
Jae-Hyung Lee,
Changhui Yan,
Robert L. Jernigan,
Susan Carpenter,
Vasant Honavar,
Drena Dobbs:
Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and Rna Binding Sites in Rev Proteins of Hiv-1 and Eiav Agree with Experimental Data
CoRR abs/cs/0511075: (2005) |
| 6 |  | Feng Cui,
Robert L. Jernigan,
Zhijun Wu:
Refinement of Nmr-determined Protein Structures with Database Derived Distance Constraints.
J. Bioinformatics and Computational Biology 3(6): 1315-1330 (2005) |
| 2004 |
| 5 |  | Taner Z. Sen,
Andrzej Kloczkowski,
Robert L. Jernigan,
Changhui Yan,
Vasant Honavar,
Kai-Ming Ho,
Cai-Zhuang Wang,
Yungok Ihm,
Haibo Cao,
Xun Gu,
Drena Dobbs:
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods.
BMC Bioinformatics 5: 205 (2004) |
| 2003 |
| 4 |  | Moon K. Kim,
Robert L. Jernigan,
Bruce A. Shapiro,
Gregory S. Chirikjian:
A Study of Conformational Changes in Macromolecules: The Coarse-Grained Elastic Network Interpolation Method.
METMBS 2003: 140-145 |
| 2002 |
| 3 |  | Marc L. Mansfield,
David G. Covell,
Robert L. Jernigan:
A New Class of Molecular Shape Descriptors, 1. Theory and Properties.
Journal of Chemical Information and Computer Sciences 42(2): 259-273 (2002) |
| 2 |  | Pemra Doruker,
Robert L. Jernigan,
Ivet Bahar:
Dynamics of large proteins through hierarchical levels of coarse-grained structures.
Journal of Computational Chemistry 23(1): 119-127 (2002) |
| 1997 |
| 1 |  | Brooke Lustig,
Shalini Arora,
Robert L. Jernigan:
RNA base-amino acid interaction strengths derived from structures and sequences.
Nucleic Acids Research 25(13): 2562-2565 (1997) |