Jacob Köhler

	2009
18		Jan Taubert, Matthew Hindle, Artem Lysenko, Jochen Weile, Jacob Köhler, Christopher J. Rawlings: Linking Life Sciences Data Using Graph-Based Mapping. DILS 2009: 16-30
	2008
17		Robert Pesch, Artem Lysenko, Matthew Hindle, Keywan Hassani-Pak, Ralf Thiele, Christopher J. Rawlings, Jacob Köhler, Jan Taubert: Graph-based sequence annotation using a data integration approach. J. Integrative Bioinformatics 5(2): (2008)
16		Rainer Winnenburg, Martin Urban, Andrew Beacham, Thomas K. Baldwin, Sabrina Holland, Magdalen Lindeberg, Hilde Hansen, Christopher J. Rawlings, Kim E. Hammond-Kosack, Jacob Köhler: PHI-base update: additions to the pathogen-host interaction database. Nucleic Acids Research 36(Database-Issue): 572-576 (2008)
	2007
15		Jan Taubert, Klaus Peter Sieren, Matthew Hindle, Berend Hoekman, Rainer Winnenburg, Stephan Philippi, Christopher J. Rawlings, Jacob Köhler: The OXL format for the exchange of integrated datasets. J. Integrative Bioinformatics 4(3): (2007)
	2006
14		Jacob Köhler, Katherine Munn, Alexander Rüegg, Andre Skusa, Barry Smith: Quality control for terms and definitions in ontologies and taxonomies. BMC Bioinformatics 7: 212 (2006)
13		Jacob Köhler, Jan Baumbach, Jan Taubert, Michael Specht, Andre Skusa, Alexander Rüegg, Christopher J. Rawlings, Paul Verrier, Stephan Philippi: Graph-based analysis and visualization of experimental results with ONDEX. Bioinformatics 22(11): 1383-1390 (2006)
12		Stephan Philippi, Jacob Köhler: Automated Structure Extraction and XML Conversion of Life Science Database Flat Files. IEEE Transactions on Information Technology in Biomedicine 10(4): 714-721 (2006)
11		Jacob Köhler, Stephan Philippi, Michael Specht, Alexander Rüegg: Ontology based text indexing and querying for the semantic web. Knowl.-Based Syst. 19(8): 744-754 (2006)
10		Rainer Winnenburg, Thomas K. Baldwin, Martin Urban, Christopher J. Rawlings, Jacob Köhler, Kim E. Hammond-Kosack: PHI-base: a new database for pathogen host interactions. Nucleic Acids Research 34(Database-Issue): 459-464 (2006)
	2005
9		Andre Skusa, Alexander Rüegg, Jacob Köhler: Extraction of biological interaction networks from scientific literature. Briefings in Bioinformatics 6(3): 263-276 (2005)
	2004
8		Barry Smith, Jacob Köhler, Anand Kumar: On the Application of Formal Principles to Life Science Data: a Case Study in the Gene Ontology. DILS 2004: 79-94
7		Stephan Philippi, Jacob Köhler: Using XML Technology for the Ontology-Based Semantic Integration of Life Science Databases. IEEE Transactions on Information Technology in Biomedicine 8(2): 154-160 (2004)
6		Jacob Köhler, Christopher J. Rawlings, Paul Verrier, Rowan A. C. Mitchell, Andre Skusa, Alexander Rüegg, Stephan Philippi: Linking experimental results, biological networks and sequence analysis methods using Ontologies and Generalized Data Structures. In Silico Biology 5: (2004)
	2003
5		Jacob Köhler, Stephan Philippi, Matthias Lange: SEMEDA: ontology based semantic integration of biological databases. Bioinformatics 19(18): 2420-2427 (2003)
	2002
4		Ming Chen, Andreas Freier, Jacob Köhler, Alexander Rüegg: The biology Petri net markup language. Promise 2002: 150-161
3		Jacob Köhler, Steffen Schulze-Kremer: The Semantic Metadatabase (SEMEDA): Ontology Based Integration of Federated Molecular Biological Data Sources. In Silico Biology 2: 21 (2002)
	2001
2		Jacob Köhler, Steffen Schulze-Kremer: The Semantic Metadatabase (SEMEDA): Ontology Based Integration of Federated Molecular Biological Data Sources. German Conference on Bioinformatics 2001: 47-52
	2000
1		Jacob Köhler, Matthias Lange, Ralf Hofestädt, Steffen Schulze-Kremer: Logical and Semantic Database Integration. BIBE 2000: 77-80

Coauthor Index

1	Thomas K. Baldwin	[10] [16]
2	Jan Baumbach	[13]
3	Andrew Beacham	[16]
4	Ming Chen	[4]
5	Andreas Freier	[4]
6	Kim E. Hammond-Kosack	[10] [16]
7	Hilde Hansen	[16]
8	Keywan Hassani-Pak	[17]
9	Matthew Hindle	[15] [17] [18]
10	Berend Hoekman	[15]
11	Ralf Hofestädt	[1]
12	Sabrina Holland	[16]
13	Anand Kumar	[8]
14	Matthias Lange	[1] [5]
15	Magdalen Lindeberg	[16]
16	Artem Lysenko	[17] [18]
17	Rowan A. C. Mitchell	[6]
18	Katherine Munn	[14]
19	Robert Pesch	[17]
20	Stephan Philippi	[5] [6] [7] [11] [12] [13] [15]
21	Christopher J. Rawlings	[6] [10] [13] [15] [16] [17] [18]
22	Alexander Rüegg	[4] [6] [9] [11] [13] [14]
23	Steffen Schulze-Kremer	[1] [2] [3]
24	Klaus Peter Sieren	[15]
25	Andre Skusa	[6] [9] [13] [14]
26	Barry Smith	[8] [14]
27	Michael Specht	[11] [13]
28	Jan Taubert	[13] [15] [17] [18]
29	Ralf Thiele	[17]
30	Martin Urban	[10] [16]
31	Paul Verrier	[6] [13]
32	Jochen Weile	[18]
33	Rainer Winnenburg	[10] [15] [16]