Misha Kapushesky

	2009
12		Audrey Kauffmann, Tim F. Rayner, Helen E. Parkinson, Misha Kapushesky, Margus Lukk, Alvis Brazma, Wolfgang Huber: Importing ArrayExpress datasets into R/Bioconductor. Bioinformatics 25(16): 2092-2094 (2009)
11		Helen E. Parkinson, Misha Kapushesky, Nikolay Kolesnikov, Gabriella Rustici, Mohammadreza Shojatalab, Niran Abeygunawardena, Hugo Berube, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Ibne Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Zheng Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna Guha Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma: ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Research 37(Database-Issue): 868-872 (2009)
	2008
10		Yannick Haudry, Chuang Kee Ong, Laurence Ettwiller, Hugo Berube, Ivica Letunic, Misha Kapushesky, Paul-Daniel Weeber, Xi Wang, Julien Gagneur, Charles Girardot, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich: Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress. APBC 2008: 373-382
9		Yannick Haudry, Hugo Berube, Ivica Letunic, Paul-Daniel Weeber, Julien Gagneur, Charles Girardot, Misha Kapushesky, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich: 4DXpress: a database for cross-species expression pattern comparisons. Nucleic Acids Research 36(Database-Issue): 847-853 (2008)
	2007
8		Helen E. Parkinson, Misha Kapushesky, Mohammadreza Shojatalab, Niran Abeygunawardena, Richard Coulson, Anna Farne, Ele Holloway, N. Kolesnykov, P. Lilja, Margus Lukk, Roby Mani, Tim F. Rayner, Anjan Sharma, E. William, Ugis Sarkans, Alvis Brazma: ArrayExpress - a public database of microarray experiments and gene expression profiles. Nucleic Acids Research 35(Database-Issue): 747-750 (2007)
	2006
7		Jonathon Blake, Christian Schwager, Misha Kapushesky, Alvis Brazma: ChroCoLoc: an application for calculating the probability of co-localization of microarray gene expression. Bioinformatics 22(6): 765-767 (2006)
	2005
6		Aurora Torrente, Misha Kapushesky, Alvis Brazma: A new algorithm for comparing and visualizing relationships between hierarchical and flat gene expression data clusterings. Bioinformatics 21(21): 3993-3999 (2005)
5		Ugis Sarkans, Helen E. Parkinson, Gonzalo Garcia Lara, Ahmet Oezcimen, Anjan Sharma, Niran Abeygunawardena, Sergio Contrino, Ele Holloway, Philippe Rocca-Serra, Gaurab Mukherjee, Mohammadreza Shojatalab, Misha Kapushesky, Susanna-Assunta Sansone, Anna Farne, Tim F. Rayner, Alvis Brazma: The ArrayExpress gene expression database: a software engineering and implementation perspective. Bioinformatics 21(8): 1495-1501 (2005)
4		Helen E. Parkinson, Ugis Sarkans, Mohammadreza Shojatalab, Niran Abeygunawardena, Sergio Contrino, Richard Coulson, Anna Farne, Gonzalo Garcia Lara, Ele Holloway, Misha Kapushesky, P. Lilja, Gaurab Mukherjee, Ahmet Oezcimen, Tim F. Rayner, Philippe Rocca-Serra, Anjan Sharma, Susanna-Assunta Sansone, Alvis Brazma: ArrayExpress - a public repository for microarray gene expression data at the EBI. Nucleic Acids Research 33(Database-Issue): 553-555 (2005)
	2004
3		Lev Soinov, Alexander Kanapin, Misha Kapushesky: Supervised Learning-Aided Optimization of Expert-Driven Functional Protein Sequence Annotation. WABI 2004: 159-169
2		Misha Kapushesky, Patrick Kemmeren, Aedín C. Culhane, Steffen Durinck, Jan Ihmels, Christine Körner, Meelis Kull, Aurora Torrente, Ugis Sarkans, Jaak Vilo, Alvis Brazma: Expression Profiler: next generation - an online platform for analysis of microarray data. Nucleic Acids Research 32(Web-Server-Issue): 465-470 (2004)
	2003
1		Alvis Brazma, Helen E. Parkinson, Ugis Sarkans, Mohammadreza Shojatalab, Jaak Vilo, Niran Abeygunawardena, Ele Holloway, Misha Kapushesky, Patrick Kemmeren, Gonzalo Garcia Lara, Ahmet Oezcimen, Philippe Rocca-Serra, Susanna-Assunta Sansone: ArrayExpress - a public repository for microarray gene expression data at the EBI. Nucleic Acids Research 31(1): 68-71 (2003)

Coauthor Index

1	Niran Abeygunawardena	[1] [4] [5] [8] [11]
2	Tomasz Adamusiak	[11]
3	Detlev Arendt	[9] [10]
4	Hugo Berube	[9] [10] [11]
5	Jonathon Blake	[7]
6	Peer Bork	[9] [10]
7	Xiangqun Zheng Bradley	[11]
8	Marco Brandizi	[11]
9	Alvis Brazma	[1] [2] [4] [5] [6] [7] [8] [9] [10] [11] [12]
10	Tony Burdett	[11]
11	Sergio Contrino	[4] [5]
12	Richard Coulson	[4] [8] [11]
13	Aedín C. Culhane	[2]
14	Steffen Durinck	[2]
15	Miroslaw Dylag	[11]
16	Ibrahim Emam	[11]
17	Laurence Ettwiller	[10]
18	Anna Farne	[4] [5] [8] [11]
19	Eileen E. M. Furlong	[9] [10]
20	Julien Gagneur	[9] [10]
21	Charles Girardot	[9] [10]
22	Yannick Haudry	[9] [10]
23	Thorsten Henrich	[9] [10]
24	Ele Holloway	[1] [4] [5] [8] [11]
25	Wolfgang Huber	[12]
26	Jan Ihmels	[2]
27	Alexander Kanapin	[3]
28	Audrey Kauffmann	[12]
29	Patrick Kemmeren	[1] [2]
30	Nikolay Kolesnikov	[11]
31	N. Kolesnykov	[8]
32	Christine Körner	[2]
33	Maria Krestyaninova	[11]
34	Meelis Kull	[2]
35	Pavel Kurnosov	[11]
36	Gonzalo Garcia Lara	[1] [4] [5]
37	Ivica Letunic	[9] [10]
38	P. Lilja	[4] [8]
39	Margus Lukk	[8] [11] [12]
40	Eamonn Maguire	[11]
41	James Malone	[11]
42	Roby Mani	[8] [11]
43	Gaurab Mukherjee	[4] [5]
44	Sudeshna Guha Neogi	[11]
45	Ahmet Oezcimen	[1] [4] [5]
46	Chuang Kee Ong	[10]
47	Helen E. Parkinson	[1] [4] [5] [8] [11] [12]
48	Ekaterina Pilicheva	[11]
49	Tim F. Rayner	[4] [5] [8] [11] [12]
50	Faisal Ibne Rezwan	[11]
51	Philippe Rocca-Serra	[1] [4] [5] [11]
52	Gabriella Rustici	[11]
53	Susanna-Assunta Sansone	[1] [4] [5] [11]
54	Ugis Sarkans	[1] [2] [4] [5] [8] [11]
55	Christian Schwager	[7]
56	Anjan Sharma	[4] [5] [8] [11]
57	Mohammadreza Shojatalab	[1] [4] [5] [8] [11]
58	Nataliya Sklyar	[11]
59	Lev Soinov	[3]
60	Aurora Torrente	[2] [6]
61	Jaak Vilo	[1] [2]
62	Xi Wang	[10]
63	Paul-Daniel Weeber	[9] [10]
64	E. William	[8]
65	Eleanor Williams	[11]
66	Joachim Wittbrodt	[9] [10]
67	Mengyao Zhao	[11]