John L. Klepeis

	2009
13		David E. Shaw, Ron O. Dror, John K. Salmon, John P. Grossman, Kenneth M. Mackenzie, Joseph A. Bank, Cliff Young, Martin M. Deneroff, Brannon Batson, Kevin J. Bowers, Edmond Chow, Michael P. Eastwood, Doug Ierardi, John L. Klepeis, Jeffrey Kuskin, Richard H. Larson, Kresten Lindorff-Larsen, Paul Maragakis, Mark A. Moraes, Stefano Piana, Yibing Shan, Brian Towles: Millisecond-scale molecular dynamics simulations on Anton. SC 2009
12		David E. Shaw, Ron O. Dror, John K. Salmon, John P. Grossman, Kenneth M. Mackenzie, Joseph A. Bank, Cliff Young, Martin M. Deneroff, Brannon Batson, Kevin J. Bowers, Edmond Chow, Michael P. Eastwood, Doug Ierardi, John L. Klepeis, Jeffrey Kuskin, Richard H. Larson, Kresten Lindorff-Larsen, Paul Maragakis, Mark A. Moraes, Stefano Piana, Yibing Shan, Brian Towles: Millisecond-scale molecular dynamics simulations on Anton. SC 2009
11		John L. Klepeis, Christodoulos A. Floudas: Multiple Minima Problem in Protein Folding: aplhaBB Global Optimization Approach. Encyclopedia of Optimization 2009: 2490-2497
	2008
10		Richard H. Larson, John K. Salmon, Ron O. Dror, Martin M. Deneroff, Cliff Young, John P. Grossman, Yibing Shan, John L. Klepeis, David E. Shaw: High-throughput pairwise point interactions in Anton, a specialized machine for molecular dynamics simulation. HPCA 2008: 331-342
9		Tiankai Tu, Charles A. Rendleman, David W. Borhani, Ron O. Dror, Justin Gullingsrud, Morten Ø. Jensen, John L. Klepeis, Paul Maragakis, Patrick Miller, Kate A. Stafford, David E. Shaw: A scalable parallel framework for analyzing terascale molecular dynamics simulation trajectories. SC 2008: 56
8		David E. Shaw, Martin M. Deneroff, Ron O. Dror, Jeffrey Kuskin, Richard H. Larson, John K. Salmon, Cliff Young, Brannon Batson, Kevin J. Bowers, Jack C. Chao, Michael P. Eastwood, Joseph Gagliardo, John P. Grossman, Richard C. Ho, Doug Ierardi, István Kolossváry, John L. Klepeis, Timothy Layman, Christine McLeavey, Mark A. Moraes, Rolf Mueller, Edward C. Priest, Yibing Shan, Jochen Spengler, Michael Theobald, Brian Towles, Stanley C. Wang: Anton, a special-purpose machine for molecular dynamics simulation. Commun. ACM 51(7): 91-97 (2008)
	2007
7		David E. Shaw, Martin M. Deneroff, Ron O. Dror, Jeffrey Kuskin, Richard H. Larson, John K. Salmon, Cliff Young, Brannon Batson, Kevin J. Bowers, Jack C. Chao, Michael P. Eastwood, Joseph Gagliardo, John P. Grossman, Richard C. Ho, Doug Ierardi, István Kolossváry, John L. Klepeis, Timothy Layman, Christine McLeavey, Mark A. Moraes, Rolf Mueller, Edward C. Priest, Yibing Shan, Jochen Spengler, Michael Theobald, Brian Towles, Stanley C. Wang: Anton, a special-purpose machine for molecular dynamics simulation. ISCA 2007: 1-12
	2006
6		Kevin J. Bowers, Edmond Chow, Huafeng Xu, Ron O. Dror, Michael P. Eastwood, Brent A. Gregersen, John L. Klepeis, István Kolossváry, Mark A. Moraes, Federico D. Sacerdoti, John K. Salmon, Yibing Shan, David E. Shaw: Molecular dynamics - Scalable algorithms for molecular dynamics simulations on commodity clusters. SC 2006: 84
	2005
5		John L. Klepeis, Christodoulos A. Floudas: Analysis and prediction of loop segments in protein structures. Computers & Chemical Engineering 29(3): 423-436 (2005)
	2003
4		John L. Klepeis, Christodoulos A. Floudas: Prediction of beta-sheet topology and disulfide bridges in polypeptides. Journal of Computational Chemistry 24(2): 191-208 (2003)
	2002
3		John L. Klepeis, Christodoulos A. Floudas: Ab initio prediction of helical segments in polypeptides. Journal of Computational Chemistry 23(2): 245-266 (2002)
	1999
2		John L. Klepeis, Christodoulos A. Floudas, Dimitrios Morikis, John D. Lambris: Predicting peptide structures using NMR data and deterministic global optimization. Journal of Computational Chemistry 20(13): 1354-1370 (1999)
1		John L. Klepeis, Christodoulos A. Floudas: Comparative study of global minimum energy conformations of hydrated peptides. Journal of Computational Chemistry 20(6): 636-654 (1999)

Coauthor Index

1	Joseph A. Bank	[12] [13]
2	Brannon Batson	[7] [8] [12] [13]
3	David W. Borhani	[9]
4	Kevin J. Bowers	[6] [7] [8] [12] [13]
5	Jack C. Chao	[7] [8]
6	Edmond Chow	[6] [12] [13]
7	Martin M. Deneroff	[7] [8] [10] [12] [13]
8	Ron O. Dror	[6] [7] [8] [9] [10] [12] [13]
9	Michael P. Eastwood	[6] [7] [8] [12] [13]
10	Christodoulos A. Floudas	[1] [2] [3] [4] [5] [11]
11	Joseph Gagliardo	[7] [8]
12	Brent A. Gregersen	[6]
13	John P. Grossman	[7] [8] [10] [12] [13]
14	Justin Gullingsrud	[9]
15	Richard C. Ho	[7] [8]
16	Doug Ierardi	[7] [8] [12] [13]
17	Morten Ø. Jensen	[9]
18	István Kolossváry	[6] [7] [8]
19	Jeffrey Kuskin	[7] [8] [12] [13]
20	John D. Lambris	[2]
21	Richard H. Larson	[7] [8] [10] [12] [13]
22	Timothy Layman	[7] [8]
23	Kresten Lindorff-Larsen	[12] [13]
24	Kenneth M. Mackenzie	[12] [13]
25	Paul Maragakis	[9] [12] [13]
26	Christine McLeavey	[7] [8]
27	Patrick Miller	[9]
28	Mark A. Moraes	[6] [7] [8] [12] [13]
29	Dimitrios Morikis	[2]
30	Rolf Mueller	[7] [8]
31	Stefano Piana	[12] [13]
32	Edward C. Priest	[7] [8]
33	Charles A. Rendleman	[9]
34	Federico D. Sacerdoti	[6]
35	John K. Salmon	[6] [7] [8] [10] [12] [13]
36	Yibing Shan	[6] [7] [8] [10] [12] [13]
37	David E. Shaw	[6] [7] [8] [9] [10] [12] [13]
38	Jochen Spengler	[7] [8]
39	Kate A. Stafford	[9]
40	Michael Theobald	[7] [8]
41	Brian Towles	[7] [8] [12] [13]
42	Tiankai Tu	[9]
43	Stanley C. Wang	[7] [8]
44	Huafeng Xu	[6]
45	Cliff Young	[7] [8] [10] [12] [13]

Colors in the list of coauthors