 | 2009 |
| 7 |  | R. Matthew Ward,
Eric Venner,
Bryce Daines,
Stephen Murray,
Serkan Erdin,
David M. Kristensen,
Olivier Lichtarge:
Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates.
Bioinformatics 25(11): 1426-1427 (2009) |
| 2008 |
| 6 |  | David M. Kristensen,
R. Matthew Ward,
Andreas Martin Lisewski,
Serkan Erdin,
Brian Y. Chen,
Viacheslav Fofanov,
Marek Kimmel,
Lydia E. Kavraki,
Olivier Lichtarge:
Prediction of enzyme function based on 3D templates of evolutionarily important amino acids.
BMC Bioinformatics 9: (2008) |
| 2007 |
| 5 |  | Brian Y. Chen,
Drew H. Bryant,
Viacheslav Fofanov,
David M. Kristensen,
Amanda E. Cruess,
Marek Kimmel,
Olivier Lichtarge,
Lydia E. Kavraki:
Cavity Scaling: Automated Refinement of Cavity-Aware motifs in protein Function Prediction.
J. Bioinformatics and Computational Biology 5(2a): 353-382 (2007) |
| 4 |  | Brian Y. Chen,
Viacheslav Fofanov,
Drew H. Bryant,
Bradley D. Dodson,
David M. Kristensen,
Andreas Martin Lisewski,
Marek Kimmel,
Olivier Lichtarge,
Lydia E. Kavraki:
The MASH Pipeline for Protein Function Prediction and an Algorithm for the Geometric Refinement of 3D Motifs.
Journal of Computational Biology 14(6): 791-816 (2007) |
| 2006 |
| 3 |  | Brian Y. Chen,
Viacheslav Fofanov,
Drew H. Bryant,
Bradley D. Dodson,
David M. Kristensen,
Andreas Martin Lisewski,
Marek Kimmel,
Olivier Lichtarge,
Lydia E. Kavraki:
Geometric Sieving: Automated Distributed Optimization of 3D Motifs for Protein Function Prediction.
RECOMB 2006: 500-515 |
| 2 |  | Daniel H. Morgan,
David M. Kristensen,
David Mittelman,
Olivier Lichtarge:
ET viewer: an application for predicting and visualizing functional sites in protein structures.
Bioinformatics 22(16): 2049-2050 (2006) |
| 2005 |
| 1 |  | Brian Y. Chen,
Viacheslav Fofanov,
David M. Kristensen,
Marek Kimmel,
Olivier Lichtarge,
Lydia E. Kavraki:
Algorithms for Structural Comparison and Statistical Analysis of 3D Protein Motifs.
Pacific Symposium on Biocomputing 2005 |