Richard H. Lathrop

	2008
35		Liza S. Z. Larsen, Christopher D. Wassman, G. Wesley Hatfield, Richard H. Lathrop: Computationally Optimised DNA Assembly of synthetic genes. IJBRA 4(3): 324-336 (2008)
	2007
34		Samuel A. Danziger, Jue Zeng, Ying Wang, Rainer K. Brachmann, Richard H. Lathrop: Choosing where to look next in a mutation sequence space: Active Learning of informative p53 cancer rescue mutants. ISMB/ECCB (Supplement of Bioinformatics) 2007: 104-114
33		Kimberly A. Aeling, Nicholas R. Steffen, Matthew Johnson, G. Wesley Hatfield, Richard H. Lathrop, Donald F. Senear: DNA Deformation Energy as an Indirect Recognition Mechanism in Protein-DNA Interactions. IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 117-125 (2007)
	2006
32		Samuel A. Danziger, Sanjay Joshua Swamidass, Jue Zeng, Lawrence R. Dearth, Qiang Lu, Jonathan H. Chen, Jianlin Cheng, Vinh P. Hoang, Hiroto Saigo, Ray Luo, Pierre Baldi, Rainer K. Brachmann, Richard H. Lathrop: Functional Census of Mutation Sequence Spaces: The Example of p53 Cancer Rescue Mutants. IEEE/ACM Trans. Comput. Biology Bioinform. 3(2): 114-125 (2006)
	2004
31		Richard H. Lathrop: Biomedical Artificial Intelligence. PRICAI 2004: 1
	2002
30		Nicholas R. Steffen, S. D. Murphy, L. Tolleri, G. Wesley Hatfield, Richard H. Lathrop: DNA sequence and structure: direct and indirect recognition in protein-DNA binding. ISMB 2002: 22-30
29		Lawrence Hunter, Richard H. Lathrop: Guest Editors' Introduction-Computer Science and Biology: An Unlikely Pair. IEEE Intelligent Systems 17(2): 8-10 (2002)
	2001
28		P. F. Baldi, Richard H. Lathrop: DNA Structure, Protein-DNA Interactions, and DNA-Protein Expression - Session Introduction. Pacific Symposium on Biocomputing 2001: 101-102
27		Richard H. Lathrop: Guest Editor's Introduction-Intelligent Systems in Biology: Why the Excitement? IEEE Intelligent Systems 16(6): 8-13 (2001)
	1999
26		Jeffrey Skolnick, Richard H. Lathrop: Protein Structure Prediction - Session Introduction. Pacific Symposium on Biocomputing 1999: 480-481
25		Richard H. Lathrop: An anytime algorithm for gapped block protein threading with pair interactions. RECOMB 1999: 238-249
24		Richard H. Lathrop, Nicholas R. Steffen, Miriam P. Raphael, Sophia Deeds-Rubin, Michael J. Pazzani, Paul J. Cimoch, Darryl M. See, Jeremiah G. Tilles: Knowledge-Based Avoidance of Drug-Resistant HIV Mutants. AI Magazine 20(1): 13-25 (1999)
23		Richard H. Lathrop, Michael J. Pazzani: Combinatorial Optimization in Rapidly Mutating Drug-Resistant Viruses. J. Comb. Optim. 3(2-3): 301-320 (1999)
22		Richard H. Lathrop: An Anytime Local-to-Global Optimization Algorithm for Protein Threading in O(m2n2) Space. Journal of Computational Biology 6(3/4): 405-418 (1999)
	1998
21		Janice I. Glasgow, Timothy G. Littlejohn, François Major, Richard H. Lathrop, David Sankoff, Christoph Sensen: Proceedings of the 6th International Conference on Intelligent Systems for Molecular Biology (ISMB-98), Montréal, Québec, Canada, June 28 - July 1, 1998 AAAI 1998
20		Richard H. Lathrop, Nicholas R. Steffen, Miriam P. Raphael, Sophia Deeds-Rubin, Michael J. Pazzani, Paul J. Cimoch, Darryl M. See, Jeremiah G. Tilles: Knowledge-Based Avoidance of Drug-Resistant HIV Mutants. AAAI/IAAI 1998: 1071-1078
19		Richard H. Lathrop, Malcolm S. Casale, Douglas J. Tobias, J. Lawrence Marsh, Leslie M. Thompson: Modeling Protein Homopolymeric Repeats: Possible Polyglutamine Structural Motifs for Huntington's Disease. ISMB 1998: 105-114
	1997
18		Temple F. Smith, Loredana Lo Conte, Jadwiga R. Bienkowska, Robert G. Rogers, Chrysanthe Gaitatzes, Richard H. Lathrop: The threading approach to the inverse protein folding problem. RECOMB 1997: 287-292
17		Thomas G. Dietterich, Richard H. Lathrop, Tomás Lozano-Pérez: Solving the Multiple Instance Problem with Axis-Parallel Rectangles. Artif. Intell. 89(1-2): 31-71 (1997)
16		Temple F. Smith, Loredana Lo Conte, Jadwiga R. Bienkowska, Chrysanthe Gaitatzes, Robert G. Rogers, Richard H. Lathrop: Current Limitations to Protein Threading Approaches. Journal of Computational Biology 4(3): 217-226 (1997)
	1996
15		Richard H. Lathrop: On the Learnability of the Uncomputable. ICML 1996: 302-309
14		Kim Baxter, Evan W. Steeg, Richard H. Lathrop, Janice I. Glasgow, Suzanne Fortier: From Electron Density and Sequence to Structure: Integrating Protein Image Analysis and Threading for Structure Determination. ISMB 1996: 25-33
	1994
13		Russ B. Altman, Douglas L. Brutlag, Peter D. Karp, Richard H. Lathrop, David B. Searls: Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, August 14-17, 1994, Stanford University, Stanford, California, USA AAAI 1994
12		A. Keith Dunker, Richard H. Lathrop: Protein Structure Prediction: Introductios. HICSS (5) 1994: 295
11		Richard H. Lathrop, Temple F. Smith: A Branch-and-Bound Algorithm for Optimal Protein Threading with Pairwise (Contact Potential) Amino Acid Interactions. HICSS (5) 1994: 365-374
10		Ajay N. Jain, Thomas G. Dietterich, Richard H. Lathrop, David Chapman, Roger E. Critchlow Jr., Barr E. Bauer, Teresa A. Webster, Tomás Lozano-Pérez: Compass: A shape-based machine learning tool for drug design. Journal of Computer-Aided Molecular Design 8(6): 635-652 (1994)
	1993
9		Richard H. Lathrop, Teresa A. Webster, Temple F. Smith, Patrick H. Winston: Massively Parallel Symbolic Induction of Protein Structure/Function Relationships. Machine Learning: From Theory to Applications 1993: 157-173
8		Thomas G. Dietterich, Ajay N. Jain, Richard H. Lathrop, Tomás Lozano-Pérez: A Comparison of Dynamic Reposing and Tangent Distance for Drug Activity Prediction. NIPS 1993: 216-223
	1988
7		Richard H. Lathrop, Robert J. Hall, Gavan Duffy, K. Mark Alexander, Robert S. Kirk: Advances in Functional Abstraction from Structure. DAC 1988: 708-711
	1987
6		Robert J. Hall, Richard H. Lathrop, Robert S. Kirk: A Multiple Representation Approach to Understanding the Time Behavior of Digital Circuits. AAAI 1987: 799-803
5		Richard H. Lathrop, Robert J. Hall, Robert S. Kirk: Functional Abstraction from Structure in VLSI Simulation Models. DAC 1987: 822-828
4		Richard H. Lathrop, Teresa A. Webster, Temple F. Smith: ARIADNE: Pattern-Directed Inference and Hierarchical Abstraction in Protein Structure Recognition. Commun. ACM 30(11): 909-921 (1987)
	1986
3		Richard H. Lathrop, Robert S. Kirk: A System Which Uses Examples to Learn VLSI Structure Manipulations. AAAI 1986: 1024-1028
2		Richard H. Lathrop, Robert S. Kirk: Precedent-based manipulation of VLSI structures. DAC 1986: 667-670
	1985
1		Richard H. Lathrop, Robert S. Kirk: An extensible object-oriented mixed-mod functional simulation system. DAC 1985: 630-636

Coauthor Index

1	Kimberly A. Aeling	[33]
2	K. Mark Alexander	[7]
3	Russ B. Altman	[13]
4	P. F. Baldi	[28]
5	Pierre Baldi	[32]
6	Barr E. Bauer	[10]
7	Kim Baxter	[14]
8	Jadwiga R. Bienkowska	[16] [18]
9	Rainer K. Brachmann	[32] [34]
10	Douglas L. Brutlag	[13]
11	Malcolm S. Casale	[19]
12	David Chapman	[10]
13	Jonathan H. Chen	[32]
14	Jianlin Cheng	[32]
15	Paul J. Cimoch	[20] [24]
16	Loredana Lo Conte	[16] [18]
17	Roger E. Critchlow Jr.	[10]
18	Samuel A. Danziger	[32] [34]
19	Lawrence R. Dearth	[32]
20	Sophia Deeds-Rubin	[20] [24]
21	Thomas G. Dietterich	[8] [10] [17]
22	Gavan Duffy	[7]
23	A. Keith Dunker	[12]
24	Suzanne Fortier	[14]
25	Chrysanthe Gaitatzes	[16] [18]
26	Janice I. Glasgow	[14] [21]
27	Robert J. Hall	[5] [6] [7]
28	G. Wesley Hatfield	[30] [33] [35]
29	Vinh P. Hoang	[32]
30	Lawrence Hunter	[29]
31	Ajay N. Jain	[8] [10]
32	Matt Johnson (Matthew Johnson)	[33]
33	Peter D. Karp	[13]
34	Robert S. Kirk	[1] [2] [3] [5] [6] [7]
35	Liza S. Z. Larsen	[35]
36	Timothy G. Littlejohn	[21]
37	Tomás Lozano-Pérez	[8] [10] [17]
38	Qiang Lu	[32]
39	Ray Luo	[32]
40	François Major	[21]
41	J. Lawrence Marsh	[19]
42	S. D. Murphy	[30]
43	Michael J. Pazzani	[20] [23] [24]
44	Miriam P. Raphael	[20] [24]
45	Robert G. Rogers	[16] [18]
46	Hiroto Saigo	[32]
47	David Sankoff	[21]
48	David B. Searls	[13]
49	Darryl M. See	[20] [24]
50	Donald F. Senear	[33]
51	Christoph Sensen	[21]
52	Jeffrey Skolnick	[26]
53	Temple F. Smith	[4] [9] [11] [16] [18]
54	Evan W. Steeg	[14]
55	Nicholas R. Steffen	[20] [24] [30] [33]
56	Sanjay Joshua Swamidass	[32]
57	Leslie M. Thompson	[19]
58	Jeremiah G. Tilles	[20] [24]
59	Douglas J. Tobias	[19]
60	L. Tolleri	[30]
61	Ying Wang	[34]
62	Christopher D. Wassman	[35]
63	Teresa A. Webster	[4] [9] [10]
64	Patrick Henry Winston (Patrick H. Winston)	[9]
65	Jue Zeng	[32] [34]

Colors in the list of coauthors