Dominique Lavenier

	2009
42		Guillaume Rizk, Dominique Lavenier: GPU Accelerated RNA Folding Algorithm. ICCS (1) 2009: 1004-1013
41		Van Hoa Nguyen, Alexandre Cornu, Dominique Lavenier: Implementing protein seed-based comparison algorithm on the SGI RASC-100 platform. IPDPS 2009: 1-7
40		Pierre Peterlongo, Jacques Nicolas, Dominique Lavenier, Raoul Vorc'h, Joël Querellou: c-GAMMA: Comparative Genome Analysis of Molecular Markers. PRIB 2009: 255-269
	2008
39		Dominique Lavenier: Ordered index seed algorithm for intensive DNA sequence comparison. IPDPS 2008: 1-8
38		Xiaochun Ye, Van Hoa Nguyen, Dominique Lavenier, Dongrui Fan: Efficient Parallelization of a Protein Sequence Comparison Algorithm on Manycore Architecture. PDCAT 2008: 167-170
37		Van Hoa Nguyen, Dominique Lavenier: Speeding up subset seed algorithm for intensive protein sequence comparison. RIVF 2008: 57-63
36		Pierre Peterlongo, Laurent Noé, Dominique Lavenier, Van Hoa Nguyen, Gregory Kucherov, Mathieu Giraud: Optimal neighborhood indexing for protein similarity search. BMC Bioinformatics 9: (2008)
35		Xianyang Jiang, Dominique Lavenier, Stephen S.-T. Yau: Coding Region Prediction Based on a Universal DNA Sequence Representation Method. Journal of Computational Biology 15(10): 1237-1256 (2008)
	2007
34		Pierre Peterlongo, Laurent Noé, Dominique Lavenier, Gilles Georges, Julien Jacques, Gregory Kucherov, Mathieu Giraud: Protein Similarity Search with Subset Seeds on a Dedicated Reconfigurable Hardware. PPAM 2007: 1240-1248
33		Mathieu Giraud, Philippe Veber, Dominique Lavenier: Path-Equivalent Developments in Acyclic Weighted Automata. Int. J. Found. Comput. Sci. 18(4): 799-811 (2007)
32		Dominique Lavenier, Gilles Georges, X. Liu: A Reconfigurable Index FLASH Memory tailored to Seed-Based Genomic Sequence Comparison Algorithms. VLSI Signal Processing 48(3): 255-269 (2007)
	2006
31		Mathieu Giraud, Philippe Veber, Dominique Lavenier: Path-Equivalent Removals of epsilon-transitions in a Genomic Weighted Finite Automaton. CIAA 2006: 23-33
30		Sébastien Tempel, Mathieu Giraud, Dominique Lavenier, Israel-César Lerman, Anne-Sophie Valin, Ivan Couée, Abdelhak El Amrani, Jacques Nicolas: Domain organization within repeated DNA sequences: application to the study of a family of transposable elements. Bioinformatics 22(16): 1948-1954 (2006)
	2005
29		Nicolas Ventroux, Frédéric Blanc, Dominique Lavenier: A Low Complex Scheduling Algorithm for Multi-processor System-on-Chip. Parallel and Distributed Computing and Networks 2005: 540-545
28		Rumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev: Dynamic programming for LR-PCR segmentation of bacterium genomes. Concurrency and Computation: Practice and Experience 17(14): 1657-1668 (2005)
27		Mathieu Giraud, Dominique Lavenier: Dealing with Hardware Space Limits when Removing Epsilon-Transitions in a Genomic Weighted Finite Automaton. Journal of Automata, Languages and Combinatorics 10(2/3): 265-285 (2005)
26		Stéphane Guyetant, Mathieu Giraud, Ludovic L'Hours, Steven Derrien, Stéphane Rubini, Dominique Lavenier, Frédéric Raimbault: Cluster of re-configurable nodes for scanning large genomic banks. Parallel Computing 31(1): 73-96 (2005)
25		Raphaël David, Dominique Lavenier, Sébastien Pillement: Du microprocesseur au circuit FPGA. Une analyse sous l'angle de la reconfiguration. Technique et Science Informatiques 24(4): 395-422 (2005)
24		Mathieu Giraud, Stéphane Guyetant, Dominique Lavenier: Encodage linéaire d'automates pondérés. Filtrage de motifs génomiques et application sur l'architecture prototype R-disk. Technique et Science Informatiques 24(6): 703-724 (2005)
	2004
23		Mathieu Giraud, Dominique Lavenier: Linear Encoding Scheme for Weighted Finite Automata. CIAA 2004: 146-155
22		Rumen Andonov, Dominique Lavenier, Philippe Veber, Nicola Yanev: Dynamic Programming for LR-PCR Segmention of Bacterium Genomes. IPDPS 2004
	2003
21		Dominique Lavenier, Stéphane Guyetant, Steven Derrien, Stéphane Rubini: A Reconfigurable Parallel Disk System for Filtering Genomic Banks. Engineering of Reconfigurable Systems and Algorithms 2003: 154-166
20		Frédéric Raimbault, Dominique Lavenier: ROOM. Des machines reconfigurables orientées objet pour les applications spécifiques. Technique et Science Informatiques 22(6): 759-782 (2003)
19		Maya Gokhale, Janette Frigo, Kevin McCabe, James Theiler, Christophe Wolinski, Dominique Lavenier: Experience with a Hybrid Processor: K-Means Clustering. The Journal of Supercomputing 26(2): 131-148 (2003)
	2001
18		Janette Frigo, Maya Gokhale, Dominique Lavenier: Evaluation of the streams-C C-to-FPGA compiler: an applications perspective. FPGA 2001: 134-140
17		Loïc Lagadec, Dominique Lavenier, Erwan Fabiani, Bernard Pottier: Placing, Routing, and Editing Virtual FPGAs. FPL 2001: 357-366
16		Yan Solihin, Kirk W. Cameron, Yong Luo, Dominique Lavenier, Maya Gokhale: Mutable Functional Units and Their Applications on Microprocessors. ICCD 2001: 234-239
	2000
15		Erwan Fabiani, Dominique Lavenier: Placement of Linear Arrays. FPL 2000: 849-852
14		Dominique Lavenier: An FPGA systolic array using pseudo-random bit generators for computing Goldbach partitions. Integration 30(1): 77-89 (2000)
	1998
13		Dominique Lavenier, Yannick Saouter: Computing Goldbach Partitions Using Pseudo-random Bit Generator Operators on a FPFA Systolic Array. FPL 1998: 316-325
	1997
12		Dominique Lavenier, Jean-Lin Pacherie: Parallel Processing for Scanning Genomic Data-Bases. PARCO 1997: 81-88
11		Pascale Guerdoux-Jamet, Dominique Lavenier: SAMBA: hardware accelerator for biological sequence comparison. Computer Applications in the Biosciences 13(6): 609-615 (1997)
	1996
10		Pascale Guerdoux-Jamet, Dominique Lavenier, Charles Wagner, Patrice Quinton: Design and Implementation of a Parallel Architecture for Biological Sequence Comparison. Euro-Par, Vol. I 1996: 11-24
9		Dominique Lavenier: Dedicated Hardware for Biological Sequence Comparison. J. UCS 2(2): 77-86 (1996)
8		Roderick McConnell, Dominique Lavenier: Prototyping of VLSI components from a formal specification. VLSI Signal Processing 12(2): 177-186 (1996)
	1995
7		Pascale Guerdoux-Jamet, Dominique Lavenier: Systolic Filter for Fast DNA Similarity Search. ASAP 1995: 145-156
6		Dominique Lavenier, Frédéric Raimbault, Patrice Frison: I/O and computation overlap on SIMD systolic arrays. VLSI Signal Processing 9(3): 153-165 (1995)
	1994
5		Patrice Frison, François Charot, Eric Gautrin, Dominique Lavenier, Patrice Quinton, Frédéric Raimbault, Charles Wagner: From Equations to Hardware. Towards the Systematic Mapping of Algorithms onto Parallel Architectures. IJPRAI 8(2): 417-438 (1994)
	1992
4		François Charot, Patrice Frison, Eric Gautrin, Dominique Lavenier, Patrice Quinton, Charles Wagner: From Equations to Hardware: Towards Systematic Mapping of Algorithms onto Parallel Architectures. ICPIA 1992: 1-15
	1991
3		Patrice Frison, Dominique Lavenier: Experience in the design of paralle processor arrays. Algorithms and Parallel VLSI Architectures 1991: 233-242
2		Patrice Frison, Dominique Lavenier: A Fully Integrated Systolic Spelling Co-Processor. VLSI 1991: 257-266
	1988
1		Patrice Frison, Dominique Lavenier: Fast Machine for Prototyping String Correction Algorithms. RIAO 1988: 1085-1100

Coauthor Index

1	Abdelhak El Amrani	[30]
2	Rumen Andonov	[22] [28]
3	Frédéric Blanc	[29]
4	Kirk W. Cameron	[16]
5	François Charot	[4] [5]
6	Alexandre Cornu	[41]
7	Ivan Couée	[30]
8	Raphaël David	[25]
9	Steven Derrien	[21] [26]
10	Erwan Fabiani	[15] [17]
11	Dongrui Fan	[38]
12	Janette Frigo	[18] [19]
13	Patrice Frison	[1] [2] [3] [4] [5] [6]
14	Eric Gautrin	[4] [5]
15	Gilles Georges	[32] [34]
16	Mathieu Giraud	[23] [24] [26] [27] [30] [31] [33] [34] [36]
17	Maya Gokhale	[16] [18] [19]
18	Pascale Guerdoux-Jamet	[7] [10] [11]
19	Stéphane Guyetant	[21] [24] [26]
20	Julien Jacques	[34]
21	Xianyang Jiang	[35]
22	Gregory Kucherov	[34] [36]
23	Ludovic L'Hours	[26]
24	Loïc Lagadec	[17]
25	Israel-César Lerman	[30]
26	X. Liu	[32]
27	Yong Luo	[16]
28	Kevin McCabe	[19]
29	Roderick McConnell	[8]
30	Van Hoa Nguyen	[36] [37] [38] [41]
31	Jacques Nicolas	[30] [40]
32	Laurent Noé	[34] [36]
33	Jean-Lin Pacherie	[12]
34	Pierre Peterlongo	[34] [36] [40]
35	Sébastien Pillement	[25]
36	Bernard Pottier	[17]
37	Joël Querellou	[40]
38	Patrice Quinton	[4] [5] [10]
39	Frédéric Raimbault	[5] [6] [20] [26]
40	Guillaume Rizk	[42]
41	Stéphane Rubini	[21] [26]
42	Yannick Saouter	[13]
43	Yan Solihin	[16]
44	Sébastien Tempel	[30]
45	James Theiler	[19]
46	Anne-Sophie Valin	[30]
47	Philippe Veber	[22] [28] [31] [33]
48	Nicolas Ventroux	[29]
49	Raoul Vorc'h	[40]
50	Charles Wagner	[4] [5] [10]
51	Christophe Wolinski	[19]
52	Nicola Yanev	[22] [28]
53	Stephen S.-T. Yau	[35]
54	Xiaochun Ye	[38]

Colors in the list of coauthors