 | 2009 |
| 15 |  | Yan Yuan Tseng,
Craig Dupree,
Z. Jeffrey Chen,
Wen-Hsiung Li:
SplitPocket: identification of protein functional surfaces and characterization of their spatial patterns.
Nucleic Acids Research 37(Web-Server-Issue): 384-389 (2009) |
| 2008 |
| 14 |  | Jengnan Tzeng,
Henry Horng-Shing Lu,
Wen-Hsiung Li:
Multidimensional scaling for large genomic data sets.
BMC Bioinformatics 9: (2008) |
| 13 |  | Wei-Sheng Wu,
Wen-Hsiung Li:
Systematic identification of yeast cell cycle transcription factors using multiple data sources.
BMC Bioinformatics 9: (2008) |
| 2007 |
| 12 |  | Li-Hsieh Lin,
Hsiao-Ching Lee,
Wen-Hsiung Li,
Bor-Sen Chen:
A systematic approach to detecting transcription factors in response to environmental stresses.
BMC Bioinformatics 8: (2007) |
| 11 |  | Wei-Sheng Wu,
Wen-Hsiung Li,
Bor-Sen Chen:
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data.
BMC Bioinformatics 8: (2007) |
| 10 |  | Huai-Kuang Tsai,
Meng-Yuan Chou,
Ching Hua Shih,
Grace Tzu-Wei Huang,
Tien-Hsien Chang,
Wen-Hsiung Li:
MYBS: a comprehensive web server for mining transcription factor binding sites in yeast.
Nucleic Acids Research 35(Web-Server-Issue): 221-226 (2007) |
| 2006 |
| 9 |  | Wen-Hsiung Li:
On the Inference of Regulatory Elements, Circuits, and Modules.
APBC 2006: 1 |
| 8 |  | Wei-Sheng Wu,
Wen-Hsiung Li,
Bor-Sen Chen:
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle.
BMC Bioinformatics 7: 421 (2006) |
| 7 |  | Huai-Kuang Tsai,
Grace Tzu-Wei Huang,
Meng-Yuan Chou,
Henry Horng-Shing Lu,
Wen-Hsiung Li:
Method for identifying transcription factor binding sites in yeast.
Bioinformatics 22(14): 1675-1681 (2006) |
| 2005 |
| 6 |  | Jake K. Byrnes,
Wen-Hsiung Li:
Patterns of Gene Deletion following Genome Duplication in Yeast.
CSB Workshops 2005: 25-26 |
| 5 |  | Li-Hsieh Lin,
Hsiao-Ching Lee,
Wen-Hsiung Li,
Bor-Sen Chen:
Dynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification.
BMC Bioinformatics 6: 258 (2005) |
| 4 |  | Bor-Sen Chen,
Yu-Chao Wang,
Wei-Sheng Wu,
Wen-Hsiung Li:
A new measure of the robustness of biochemical networks.
Bioinformatics 21(11): 2698-2705 (2005) |
| 3 |  | Te-Ming Chen,
Chung-Chin Lu,
Wen-Hsiung Li:
Prediction of splice sites with dependency graphs and their expanded bayesian networks.
Bioinformatics 21(4): 471-482 (2005) |
| 2004 |
| 2 |  | Hong-Chu Chen,
Hsiao-Ching Lee,
Tsai-Yun Lin,
Wen-Hsiung Li,
Bor-Sen Chen:
Quantitative characterization of the transcriptional regulatory network in the yeast cell cycle.
Bioinformatics 20(12): 1914-1927 (2004) |
| 2003 |
| 1 |  | Anton Nekrutenko,
Wen-Yu Chung,
Wen-Hsiung Li:
ETOPE: evolutionary test of predicted exons.
Nucleic Acids Research 31(13): 3564-3567 (2003) |