| 2008 |
|---|
| 68 | EE | Bin Ma:
Why Greed Works for Shortest Common Superstring Problem.
CPM 2008: 244-254 |
| 67 | EE | Bin Ma,
Xiaoming Sun:
More Efficient Algorithms for Closest String and Substring Problems.
RECOMB 2008: 396-409 |
| 66 | EE | Baozhen Shan,
Bin Ma,
Kaizhong Zhang,
Gilles Lajoie:
Complexities and Algorithms for Glycan Sequencing Using Tandem Mass Spectrometry.
J. Bioinformatics and Computational Biology 6(1): 77-91 (2008) |
| 2007 |
|---|
| 65 | | Bin Ma,
Kaizhong Zhang:
Combinatorial Pattern Matching, 18th Annual Symposium, CPM 2007, London, Canada, July 9-11, 2007, Proceedings
Springer 2007 |
| 64 | EE | Baozhen Shan,
Bin Ma,
Kaizhong Zhang,
Gilles Lajoie:
Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry.
APBC 2007: 297-306 |
| 63 | EE | Shihyen Chen,
Bin Ma,
Kaizhong Zhang:
The Normalized Similarity Metric and Its Applications.
BIBM 2007: 172-180 |
| 62 | EE | Chin-Wei Eugene Koh,
Hanwu Sun,
Tin Lay Nwe,
Trung Hieu Nguyen,
Bin Ma,
Chng Eng Siong,
Haizhou Li,
Susanto Rahardja:
Speaker Diarization Using Direction of Arrival Estimate and Acoustic Feature Information: The I2R-NTU Submission for the NIST RT 2007 Evaluation.
CLEAR 2007: 484-496 |
| 61 | EE | Lei Xin,
Bin Ma,
Kaizhong Zhang:
A New Quartet Approach for Reconstructing Phylogenetic Trees: Quartet Joining Method.
COCOON 2007: 40-50 |
| 60 | EE | Miklós Csürös,
Bin Ma:
Rapid Homology Search with Neighbor Seeds.
Algorithmica 48(2): 187-202 (2007) |
| 59 | EE | Sriram Chellappan,
Wenjun Gu,
Xiaole Bai,
Dong Xuan,
Bin Ma,
Kaizhong Zhang:
Deploying Wireless Sensor Networks under Limited Mobility Constraints.
IEEE Trans. Mob. Comput. 6(10): 1142-1157 (2007) |
| 58 | EE | Sriram Chellappan,
Xiaole Bai,
Bin Ma,
Dong Xuan,
Changqing Xu:
Mobility Limited Flip-Based Sensor Networks Deployment.
IEEE Trans. Parallel Distrib. Syst. 18(2): 199-211 (2007) |
| 57 | EE | Bin Ma,
Lusheng Wang,
Ming Li:
Near optimal multiple alignment within a band in polynomial time.
J. Comput. Syst. Sci. 73(6): 997-1011 (2007) |
| 56 | EE | Bin Ma,
Ming Li:
On the complexity of the spaced seeds.
J. Comput. Syst. Sci. 73(7): 1024-1034 (2007) |
| 2006 |
|---|
| 55 | | Qiang Huo,
Bin Ma,
Chng Eng Siong,
Haizhou Li:
Chinese Spoken Language Processing, 5th International Symposium, ISCSLP 2006, Singapore, December 13-16, 2006, Proceedings
Springer 2006 |
| 54 | EE | Kong-Aik Lee,
Hanwu Sun,
Rong Tong,
Bin Ma,
Minghui Dong,
Changhuai You,
Donglai Zhu,
Chin-Wei Eugene Koh,
Lei Wang,
Tomi Kinnunen,
Chng Eng Siong,
Haizhou Li:
The IIR Submission to CSLP 2006 Speaker Recognition Evaluation.
ISCSLP 2006: 494-505 |
| 53 | EE | Rong Tong,
Bin Ma,
Kong-Aik Lee,
Changhuai You,
Donglai Zhu,
Tomi Kinnunen,
Hanwu Sun,
Minghui Dong,
Chng Eng Siong,
Haizhou Li:
Fusion of Acoustic and Tokenization Features for Speaker Recognition.
ISCSLP 2006: 566-577 |
| 52 | EE | Ming Li,
Bin Ma,
Louxin Zhang:
Superiority and complexity of the spaced seeds.
SODA 2006: 444-453 |
| 51 | EE | Jian Liu,
Bin Ma,
Ming Li:
Prima: Peptide Robust Identification from Ms/ms Spectra.
J. Bioinformatics and Computational Biology 4(1): 125-138 (2006) |
| 50 | EE | Bin Ma,
Lieyu Wu,
Kaizhong Zhang:
Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures.
J. Bioinformatics and Computational Biology 4(3): 709-720 (2006) |
| 2005 |
|---|
| 49 | EE | Haizhou Li,
Bin Ma:
A Phonotactic Language Model for Spoken Language Identification.
ACL 2005 |
| 48 | EE | Jian Liu,
Bin Ma,
Ming Li:
PRIME: Peptide robust identification from MS/MS spectra.
APBC 2005: 181-190 |
| 47 | EE | Miklós Csürös,
Bin Ma:
Rapid Homology Search with Two-Stage Extension and Daughter Seeds.
COCOON 2005: 104-114 |
| 46 | EE | Bin Ma,
Kaizhong Zhang:
On the Longest Common Rigid Subsequence Problem.
CPM 2005: 11-20 |
| 45 | EE | Bin Ma,
Lieyu Wu,
Kaizhong Zhang:
Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures.
International Conference on Computational Science (2) 2005: 960-967 |
| 44 | EE | Bin Ma,
Haizhou Li:
A phonotactic-semantic paradigm for automatic spoken document classification.
SIGIR 2005: 369-376 |
| 43 | EE | Derek Kisman,
Ming Li,
Bin Ma,
Li Wang:
tPatternHunter: gapped, fast and sensitive translated homology search .
Bioinformatics 21(4): 542-544 (2005) |
| 42 | EE | Yonghua Han,
Bin Ma,
Kaizhong Zhang:
An automata approach to match gapped sequence tags against protein database.
Int. J. Found. Comput. Sci. 16(3): 487-497 (2005) |
| 41 | EE | Yonghua Han,
Bin Ma,
Kaizhong Zhang:
Spider: Software for Protein Identification from Sequence Tags with de Novo Sequencing Error.
J. Bioinformatics and Computational Biology 3(3): 697-716 (2005) |
| 40 | EE | Bin Ma,
Kaizhong Zhang,
Chengzhi Liang:
An effective algorithm for peptide de novo sequencing from MS/MS spectra.
J. Comput. Syst. Sci. 70(3): 418-430 (2005) |
| 2004 |
|---|
| 39 | EE | Xiaolong Yang,
Qianbin Chen,
Youju Mao,
Keping Long,
Bin Ma:
Mobility Prediction-Based Wireless Resource Allocation and Reservation.
AWCC 2004: 1-11 |
| 38 | EE | Yonghua Han,
Bin Ma,
Kaizhong Zhang:
An Automata Approach to Match Gapped Sequence Tags Against Protein Database.
CIAA 2004: 167-177 |
| 37 | EE | Jinbo Xu,
Daniel G. Brown,
Ming Li,
Bin Ma:
Optimizing Multiple Spaced Seeds for Homology Search.
CPM 2004: 47-58 |
| 36 | EE | Yonghua Han,
Bin Ma,
Kaizhong Zhang:
SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error.
CSB 2004: 206-215 |
| 35 | EE | Uri Keich,
Ming Li,
Bin Ma,
John Tromp:
On spaced seeds for similarity search.
Discrete Applied Mathematics 138(3): 253-263 (2004) |
| 34 | EE | Ming Li,
Xin Chen,
Xin Li,
Bin Ma,
Paul M. B. Vitányi:
The similarity metric.
IEEE Transactions on Information Theory 50(12): 3250-3264 (2004) |
| 33 | EE | Ming Li,
Bin Ma,
Derek Kisman,
John Tromp:
Patternhunter Ii: Highly Sensitive and Fast Homology Search.
J. Bioinformatics and Computational Biology 2(3): 417-440 (2004) |
| 32 | EE | Daniel G. Brown,
Ming Li,
Bin Ma:
A Tutorial of Recent Developments in the Seeding of Local Alignment.
J. Bioinformatics and Computational Biology 2(4): 819-842 (2004) |
| 31 | EE | Tao Jiang,
Guohui Lin,
Bin Ma,
Kaizhong Zhang:
The longest common subsequence problem for arc-annotated sequences.
J. Discrete Algorithms 2(2): 257-270 (2004) |
| 2003 |
|---|
| 30 | EE | Bin Ma,
Zhuozhi Wang,
Kaizhong Zhang:
Alignment between Two Multiple Alignments.
CPM 2003: 254-265 |
| 29 | EE | Bin Ma,
Kaizhong Zhang,
Chengzhi Liang:
An Effective Algorithm for the Peptide De Novo Sequencing from MS/MS Spectrum.
CPM 2003: 266-277 |
| 28 | EE | Ming Li,
Xin Chen,
Xin Li,
Bin Ma,
Paul M. B. Vitányi:
The similarity metric.
SODA 2003: 863-872 |
| 27 | | Louxin Zhang,
Bin Ma,
Lusheng Wang,
Ying Xu:
Greedy method for inferring tandem duplication history.
Bioinformatics 19(12): 1497-1504 (2003) |
| 26 | EE | J. Kevin Lanctot,
Ming Li,
Bin Ma,
Shaojiu Wang,
Louxin Zhang:
Distinguishing string selection problems.
Inf. Comput. 185(1): 41-55 (2003) |
| 25 | EE | Xiaotie Deng,
Guojun Li,
Zimao Li,
Bin Ma,
Lusheng Wang:
Genetic Design of Drugs Without Side-Effects.
SIAM J. Comput. 32(4): 1073-1090 (2003) |
| 2002 |
|---|
| 24 | EE | Xiaotie Deng,
Guojun Li,
Zimao Li,
Bin Ma,
Lusheng Wang:
A PTAS for Distinguishing (Sub)string Selection.
ICALP 2002: 740-751 |
| 23 | EE | Louxin Zhang,
Bin Ma,
Lusheng Wang:
Efficient Methods for Inferring Tandem Duplication History.
WABI 2002: 97-111 |
| 22 | | Xin Chen,
Ming Li,
Bin Ma,
John Tromp:
DNACompress: fast and effective DNA sequence compression.
Bioinformatics 18(12): 1696-1698 (2002) |
| 21 | | Bin Ma,
John Tromp,
Ming Li:
PatternHunter: faster and more sensitive homology search.
Bioinformatics 18(3): 440-445 (2002) |
| 20 | EE | Ming Li,
Bin Ma,
Lusheng Wang:
On the closest string and substring problems.
J. ACM 49(2): 157-171 (2002) |
| 19 | EE | Ming Li,
Bin Ma,
Lusheng Wang:
Finding Similar Regions in Many Sequences.
J. Comput. Syst. Sci. 65(1): 73-96 (2002) |
| 18 | EE | Deep Jaitly,
Paul E. Kearney,
Guo-Hui Lin,
Bin Ma:
Methods for reconstructing the history of tandem repeats and their application to the human genome.
J. Comput. Syst. Sci. 65(3): 494-507 (2002) |
| 17 | | Tao Jiang,
Guohui Lin,
Bin Ma,
Kaizhong Zhang:
A General Edit Distance between RNA Structures.
Journal of Computational Biology 9(2): 371-388 (2002) |
| 16 | EE | Bin Ma,
Lusheng Wang,
Kaizhong Zhang:
Computing similarity between RNA structures.
Theor. Comput. Sci. 276(1-2): 111-132 (2002) |
| 2001 |
|---|
| 15 | EE | Guohui Lin,
Bin Ma,
Kaizhong Zhang:
Edit distance between two RNA structures.
RECOMB 2001: 211-220 |
| 14 | EE | Ming Li,
Xin Chen,
Xin Li,
Bin Ma,
Paul M. B. Vitányi:
The similarity metric
CoRR cs.CC/0111054: (2001) |
| 2000 |
|---|
| 13 | EE | Tao Jiang,
Guohui Lin,
Bin Ma,
Kaizhong Zhang:
The Longest Common Subsequence Problem for Arc-Annotated Sequences.
CPM 2000: 154-165 |
| 12 | EE | Bin Ma:
A Polynominal Time Approximation Scheme for the Closest Substring Problem.
CPM 2000: 99-107 |
| 11 | EE | Ming Li,
Bin Ma,
Lusheng Wang:
Near optimal multiple alignment within a band in polynomial time.
STOC 2000: 425-434 |
| 10 | EE | Ming Li,
Bin Ma,
Lusheng Wang:
On The Closest String and Substring Problems
CoRR cs.CE/0002012: (2000) |
| 9 | | Lusheng Wang,
Bin Ma,
Ming Li:
Fixed topology alignment with recombination.
Discrete Applied Mathematics 104(1-3): 281-300 (2000) |
| 8 | | Bin Ma,
Lusheng Wang:
On the Inapproximability of Disjoint Paths and Minimum Steiner Forest with Bandwidth Constraints.
J. Comput. Syst. Sci. 60(1): 1-12 (2000) |
| 7 | EE | Bin Ma,
Ming Li,
Louxin Zhang:
From Gene Trees to Species Trees.
SIAM J. Comput. 30(3): 729-752 (2000) |
| 1999 |
|---|
| 6 | EE | Kaizhong Zhang,
Lusheng Wang,
Bin Ma:
Computing Similarity between RNA Structures.
CPM 1999: 281-293 |
| 5 | EE | J. Kevin Lanctot,
Ming Li,
Bin Ma,
Shaojiu Wang,
Louxin Zhang:
Distinguishing String Selection Problems.
SODA 1999: 633-642 |
| 4 | EE | Ming Li,
Bin Ma,
Lusheng Wang:
Finding Similar Regions in Many Strings.
STOC 1999: 473-482 |
| 3 | | Bin Ma,
Lusheng Wang,
Louxin Zhang:
Fitting Distances by Tree Metrics with Increment Error.
J. Comb. Optim. 3(2-3): 213-225 (1999) |
| 1998 |
|---|
| 2 | | Bin Ma,
Lusheng Wang,
Ming Li:
Fixed Topology Alignment with Recombination.
CPM 1998: 174-188 |
| 1 | EE | Bin Ma,
Ming Li,
Louxin Zhang:
On reconstructing species trees from gene trees in term of duplications and losses.
RECOMB 1998: 182-191 |
