Yves Van de Peer

	2009
43		Thomas Abeel, Yves Van de Peer, Yvan Saeys: Toward a gold standard for promoter prediction evaluation. Bioinformatics 25(12): (2009)
42		Anagha Joshi, Riet De Smet, Kathleen Marchal, Yves Van de Peer, Tom Michoel: Module networks revisited: computational assessment and prioritization of model predictions. Bioinformatics 25(4): 490-496 (2009)
	2008
41		Yvan Saeys, Thomas Abeel, Yves Van de Peer: Robust Feature Selection Using Ensemble Feature Selection Techniques. ECML/PKDD (2) 2008: 313-325
40		Thomas Abeel, Yvan Saeys, Pierre Rouzé, Yves Van de Peer: ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles. ISMB 2008: 24-31
39		Rubén Armañanzas, Iñaki Inza, Roberto Santana, Yvan Saeys, Jose Luis Flores, Jose Antonio Lozano, Yves Van de Peer, Rosa Blanco, Víctor Robles, Concha Bielza, Pedro Larrañaga: A review of estimation of distribution algorithms in bioinformatics. BioData Mining 1: (2008)
38		Cedric Simillion, Koen Janssens, Lieven Sterck, Yves Van de Peer: i-ADHoRe 2.0: an improved tool to detect degenerated genomic homology using genomic profiles. Bioinformatics 24(1): 127-128 (2008)
37		Michiel Van Bel, Yvan Saeys, Yves Van de Peer: FunSiP: a modular and extensible classifier for the prediction of functional sites in DNA. Bioinformatics 24(13): 1532-1533 (2008)
36		Athanasia C. Tzika, Raphaël Helaers, Yves Van de Peer, Michel C. Milinkovitch: MANTIS: a phylogenetic framework for multi-species genome comparisons. Bioinformatics 24(2): 151-157 (2008)
35		Anagha Joshi, Yves Van de Peer, Tom Michoel: Analysis of a Gibbs sampler method for model-based clustering of gene expression data. Bioinformatics 24(2): 176-183 (2008)
	2007
34		Yvan Saeys, Thomas Abeel, Sven Degroeve, Yves Van de Peer: Translation initiation site prediction on a genomic scale: beauty in simplicity. ISMB/ECCB (Supplement of Bioinformatics) 2007: 418-423
33		Isis Bonet, María M. García, Yvan Saeys, Yves Van de Peer, Ricardo Grau Ábalo: Predicting Human Immunodeficiency Virus (HIV) Drug Resistance Using Recurrent Neural Networks. IWINAC (1) 2007: 234-243
32		Tineke Casneuf, Yves Van de Peer, Wolfgang Huber: In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation. BMC Bioinformatics 8: (2007)
31		Tom Michoel, Steven Maere, Eric Bonnet, Anagha Joshi, Yvan Saeys, Tim Van den Bulcke, Koenraad Van Leemput, Piet van Remortel, Martin Kuiper, Kathleen Marchal, Yves Van de Peer: Validating module network learning algorithms using simulated data. BMC Bioinformatics 8(S-2): (2007)
30		Yvan Saeys, Pierre Rouzé, Yves Van de Peer: In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists. Bioinformatics 23(4): 414-420 (2007)
	2006
29		Isis Bonet, Yvan Saeys, Ricardo Grau Ábalo, María M. García, Robersy Sanchez, Yves Van de Peer: Feature Extraction Using Clustering of Protein. CIARP 2006: 614-623
28		Philippe Faes, Bram Minnaert, Mark Christiaens, Eric Bonnet, Yvan Saeys, Dirk Stroobandt, Yves Van de Peer: Scalable hardware accelerator for comparing DNA and protein sequences. Infoscale 2006: 33
27		Yvan Saeys, Yves Van de Peer: Enhancing Coding Potential Prediction for Short Sequences Using Complementary Sequence Features and Feature Selection. KDECB 2006: 107-118
	2005
26		Sven Degroeve, Yvan Saeys, Bernard De Baets, Pierre Rouzé, Yves Van de Peer: SpliceMachine: predicting splice sites from high-dimensional local context representations. Bioinformatics 21(8): 1332-1338 (2005)
	2004
25		Yvan Saeys, Sven Degroeve, Yves Van de Peer: Digging into Acceptor Splice Site Prediction: An Iterative Feature Selection Approach. PKDD 2004: 386-397
24		Yvan Saeys, Sven Degroeve, Dirk Aeyels, Pierre Rouzé, Yves Van de Peer: Feature selection for splice site prediction: A new method using EDA-based feature ranking. BMC Bioinformatics 5: 64 (2004)
23		Eric Bonnet, Jan Wuyts, Pierre Rouzé, Yves Van de Peer: Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences. Bioinformatics 20(17): 2911-2917 (2004)
22		Jan Wuyts, Guy Perrière, Yves Van de Peer: The European ribosomal RNA database. Nucleic Acids Research 32(Database-Issue): 101-103 (2004)
	2003
21		Yvan Saeys, Sven Degroeve, Dirk Aeyels, Yves Van de Peer, Pierre Rouzé: Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction. ECCB 2003: 179-188
20		Stephane Rombauts, Yves Van de Peer, Pierre Rouzé: AFLPinSilico, simulating AFLP fingerprints. Bioinformatics 19(6): 776-777 (2003)
	2002
19		Sven Degroeve, Bernard De Baets, Yves Van de Peer, Pierre Rouzé: Feature subset selection for splice site prediction. ECCB 2002: 75-83
18		Yves Van de Peer, John Shawe-Taylor, Jayabalan Joseph, Axel Meyer: Wanda: a database of duplicated fish genes. Nucleic Acids Research 30(1): 109-112 (2002)
17		Jan Wuyts, Yves Van de Peer, Tina Winkelmans, Rupert De Wachter: The European database on small subunit ribosomal RNA. Nucleic Acids Research 30(1): 183-185 (2002)
16		Magali Lescot, Patrice Déhais, Gert Thijs, Kathleen Marchal, Yves Moreau, Yves Van de Peer, Pierre Rouzé, Stephane Rombauts: PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Research 30(1): 325-327 (2002)
	2001
15		Jan Wuyts, Peter De Rijk, Yves Van de Peer, Tina Winkelmans, Rupert De Wachter: The European Large Subunit Ribosomal RNA Database. Nucleic Acids Research 29(1): 175-177 (2001)
	2000
14		Yves Van de Peer, Peter De Rijk, Jan Wuyts, Tina Winkelmans, Rupert De Wachter: The European Small Subunit Ribosomal RNA database. Nucleic Acids Research 28(1): 175-176 (2000)
13		Peter De Rijk, Jan Wuyts, Yves Van de Peer, Tina Winkelmans, Rupert De Wachter: The European Large Subunit Ribosomal RNA database. Nucleic Acids Research 28(1): 177-178 (2000)
	1999
12		Peter De Rijk, Elmar Robbrecht, Sybren de Hoog, An Caers, Yves Van de Peer, Rupert De Wachter: Database on the structure of large subunit ribosomal RNA. Nucleic Acids Research 27(1): 174-178 (1999)
11		Yves Van de Peer, Elmar Robbrecht, Sybren de Hoog, An Caers, Peter De Rijk, Rupert De Wachter: Database on the structure of small subunit ribosomal RNA. Nucleic Acids Research 27(1): 179-183 (1999)
	1998
10		Yves Van de Peer, An Caers, Peter De Rijk, Rupert De Wachter: Database on the structure of small ribosomal subunit RNA. Nucleic Acids Research 26(1): 179-182 (1998)
9		Peter De Rijk, An Caers, Yves Van de Peer, Rupert De Wachter: Database on the structure of large ribosomal subunit RNA. Nucleic Acids Research 26(1): 183-186 (1998)
	1997
8		Yves Van de Peer, Rupert De Wachter: Construction of evolutionary distance trees with TREECON for Windows: accounting for variation in nucleotide substitution rate among sites. Computer Applications in the Biosciences 13(3): 227-230 (1997)
7		Yves Van de Peer, Jan Jansen, Peter De Rijk, Rupert De Wachter: Database on the structure of small ribosomal subunit RNA. Nucleic Acids Research 25(1): 111-116 (1997)
6		Peter De Rijk, Yves Van de Peer, Rupert De Wachter: Database on the structure of large ribosomal subunit RNA. Nucleic Acids Research 25(1): 117-122 (1997)
	1996
5		Yves Van de Peer, Stefan Nicolaï, Peter De Rijk, Rupert De Wachter: Database on the structure of small ribosomal subunit RNA. Nucleic Acids Research 24(1): 86-91 (1996)
4		Peter De Rijk, Yves Van de Peer, Rupert De Wachter: Database on the structure of large ribosomal subunit RNA. Nucleic Acids Research 24(1): 92-97 (1996)
	1994
3		Yves Van de Peer, Rupert De Wachter: TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Computer Applications in the Biosciences 10(5): 569-570 (1994)
	1993
2		Yves Van de Peer, Rupert De Wachter: TREECON: a software package for the construction and drawing of evolutionary trees. Computer Applications in the Biosciences 9(2): 177-182 (1993)
1		Jean-Marc Neefs, Yves Van de Peer, Peter De Rijk, Sabine Chapelle, Rupert De Wachter: Compilation of small ribosomal subunit RNA structures. Nucleic Acids Research 21(13): 3025-3049 (1993)

Coauthor Index

1	Ricardo Grau Ábalo	[29] [33]
2	Thomas Abeel	[34] [40] [41] [43]
3	Dirk Aeyels	[21] [24]
4	Rubén Armañanzas	[39]
5	Bernard De Baets	[19] [26]
6	Michiel Van Bel	[37]
7	Concha Bielza	[39]
8	Rosa Blanco	[39]
9	Isis Bonet	[29] [33]
10	Eric Bonnet	[23] [28] [31]
11	Tim Van den Bulcke	[31]
12	An Caers	[9] [10] [11] [12]
13	Tineke Casneuf	[32]
14	Sabine Chapelle	[1]
15	Mark Christiaens	[28]
16	Sven Degroeve	[19] [21] [24] [25] [26] [34]
17	Patrice Déhais	[16]
18	Philippe Faes	[28]
19	Jose Luis Flores	[39]
20	María M. García	[29] [33]
21	Raphaël Helaers	[36]
22	Sybren de Hoog	[11] [12]
23	Wolfgang Huber	[32]
24	Iñaki Inza	[39]
25	Jan Jansen	[7]
26	Koen Janssens	[38]
27	Jayabalan Joseph	[18]
28	Anagha Joshi	[31] [35] [42]
29	Martin Kuiper	[31]
30	Pedro Larrañaga	[39]
31	Koenraad Van Leemput (Koen Van Leemput)	[31]
32	Magali Lescot	[16]
33	José Antonio Lozano (Jose Antonio Lozano)	[39]
34	Steven Maere	[31]
35	Kathleen Marchal	[16] [31] [42]
36	Axel Meyer	[18]
37	Tom Michoel	[31] [35] [42]
38	Michel C. Milinkovitch	[36]
39	Bram Minnaert	[28]
40	Yves Moreau	[16]
41	Jean-Marc Neefs	[1]
42	Stefan Nicolaï	[5]
43	Guy Perrière	[22]
44	Piet van Remortel	[31]
45	Peter De Rijk	[1] [4] [5] [6] [7] [9] [10] [11] [12] [13] [14] [15]
46	Elmar Robbrecht	[11] [12]
47	Víctor Robles (Victor Robles, Víctor Robles Forcada)	[39]
48	Stephane Rombauts	[16] [20]
49	Pierre Rouzé	[16] [19] [20] [21] [23] [24] [26] [30] [40]
50	Yvan Saeys	[21] [24] [25] [26] [27] [28] [29] [30] [31] [33] [34] [37] [39] [40] [41] [43]
51	Robersy Sanchez	[29]
52	Roberto Santana	[39]
53	John Shawe-Taylor	[18]
54	Cedric Simillion	[38]
55	Riet De Smet	[42]
56	Lieven Sterck	[38]
57	Dirk Stroobandt	[28]
58	Gert Thijs	[16]
59	Athanasia C. Tzika	[36]
60	Rupert De Wachter	[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [17]
61	Tina Winkelmans	[13] [14] [15] [17]
62	Jan Wuyts	[13] [14] [15] [17] [22] [23]

Colors in the list of coauthors