Sven Rahmann

	2009
40		Sven Rahmann, Tobias Marschall, Frank Behler, Oliver Kramer: Modeling evolutionary fitness for DNA motif discovery. GECCO 2009: 225-232
39		Tobias Marschall, Sven Rahmann: Efficient exact motif discovery. Bioinformatics 25(12): (2009)
38		Jan Baumbach, Andreas Tauch, Sven Rahmann: Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks. Briefings in Bioinformatics 10(1): 75-83 (2009)
	2008
37		Epameinondas Fritzilas, Yasmin A. Rios-Solis, Sven Rahmann: Structural Identifiability in Low-Rank Matrix Factorization. COCOON 2008: 140-148
36		Tobias Marschall, Sven Rahmann: Probabilistic Arithmetic Automata and Their Application to Pattern Matching Statistics. CPM 2008: 95-106
35		Inke Herms, Sven Rahmann: Computing Alignment Seed Sensitivity with Probabilistic Arithmetic Automata. WABI 2008: 318-329
34		Utz J. Pape, Sven Rahmann, Martin Vingron: Natural similarity measures between position frequency matrices with an application to clustering. Bioinformatics 24(3): 350-357 (2008)
33		Sérgio A. de Carvalho, Jr., Sven Rahmann: Better GeneChip microarray Layouts by Combining Probe Placement and Embedding. J. Bioinformatics and Computational Biology 6(3): 623-641 (2008)
32		Jan Baumbach, Tobias Wittkop, Jochen Weile, Thomas Kohl, Sven Rahmann: MoRAine - A web server for fast computational transcription factor binding motif re-annotation. J. Integrative Bioinformatics 5(2): (2008)
31		Utz J. Pape, Sven Rahmann, Fengzhu Sun, Martin Vingron: Compound Poisson Approximation of the Number of Occurrences of a Position Frequency Matrix (PFM) on Both Strands. Journal of Computational Biology 15(6): 547-564 (2008)
30		Cees H. Elzinga, Sven Rahmann, Hui Wang: Algorithms for subsequence combinatorics. Theor. Comput. Sci. 409(3): 394-404 (2008)
	2007
29		Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, Sven Rahmann: Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing. BMC Bioinformatics 8: (2007)
28		Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert: Integer linear programming approaches for non-unique probe selection. Discrete Applied Mathematics 155(6-7): 840-856 (2007)
27		Jan Baumbach, Alexander Bunkowski, Sita Lange, Timm Oberwahrenbrock, Nils Kleinbölting, Sven Rahmann, Jörg Ingo Baumbach: IMS2 - An integrated medical software system for early lung cancer detection using ion mobility spectrometry data of human breath. J. Integrative Bioinformatics 4(3): (2007)
	2006
26		Sven Rahmann: Subsequence Combinatorics and Applications to Microarray Production, DNA Sequencing and Chaining Algorithms. CPM 2006: 153-164
25		Christian Höner zu Siederdissen, Susanne Ragg, Sven Rahmann: Discovering Biomarkers for Myocardial Infarction from SELDI-TOF Spectra. GfKl 2006: 569-576
24		Alexander Schliep, Sven Rahmann: Decoding non-unique oligonucleotide hybridization experiments of targets related by a phylogenetic tree. ISMB (Supplement of Bioinformatics) 2006: 424-430
23		Hans-Michael Kaltenbach, Sebastian Böcker, Sven Rahmann: Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting. Systems Biology and Computational Proteomics 2006: 29-41
22		Sven Rahmann, Gunnar W. Klau: Integer Linear Programs for Discovering Approximate Gene Clusters. WABI 2006: 298-309
21		Sérgio A. de Carvalho, Sven Rahmann: Improving the Layout of Oligonucleotide Microarrays: Pivot Partitioning. WABI 2006: 321-332
20		Jan Baumbach, Karina Brinkrolf, Tobias Wittkop, Andreas Tauch, Sven Rahmann: CoryneRegNet 2: An Integrative Bioinformatics Approach for Reconstruction and Comparison of Transcriptional Regulatory Networks in Prokaryotes. J. Integrative Bioinformatics 3(2): (2006)
	2005
19		Mathew J. Palakal, Sven Rahmann, Birong Liao: Editorial message: special track on bioinformatics. SAC 2005: 99
18		Stefan Roepcke, Steffen Grossmann, Sven Rahmann, Martin Vingron: T-Reg Comparator: an analysis tool for the comparison of position weight matrices. Nucleic Acids Research 33(Web-Server-Issue): 438-441 (2005)
	2004
17		Christoph Dieterich, Sven Rahmann, Martin Vingron: Functional inference from non-random distributions of conserved predicted transcription factor binding sites. ISMB/ECCB (Supplement of Bioinformatics) 2004: 109-115
16		Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert: Optimal robust non-unique probe selection using Integer Linear Programming. ISMB/ECCB (Supplement of Bioinformatics) 2004: 186-193
15		Benjamin Schuster-Böckler, Jörg Schultz, Sven Rahmann: HMM Logos for visualization of protein families. BMC Bioinformatics 5: 7 (2004)
14		Sven Rahmann, Christine Gräfe: Mean and variance of the Gibbs free energy of oligonucleotides in the nearest neighbor model under varying conditions. Bioinformatics 20(17): 2928-2933 (2004)
	2003
13		Sven Rahmann: Fast and Sensitive Probe Selection for DNA Chips Using Jumps in Matching Statistics. CSB 2003: 57-64
12		Alexander Schliep, David C. Torney, Sven Rahmann: Group Testing With DNA Chips: Generating Designs and Decoding Experiments. CSB 2003: 84-93
11		Sven Rahmann: The shortest common supersequence problem in a microarray production setting. ECCB 2003: 156-161
10		Tobias Müller, Sven Rahmann, Thomas Dandekar, Matthias Wolf: Robust estimation of the phylogeny of Chlorophyceae(Chlorophyta)based on profile distances. German Conference on Bioinformatics 2003: 97-101
9		Sven Rahmann: Dynamic Programming Algorithms for Two Statistical Problems in Computational Biology. WABI 2003: 151-164
8		Sven Rahmann, Eric Rivals: On The Distribution Of The Number Of Missing Words In Random Texts. Combinatorics, Probability & Computing 12(1): (2003)
7		Sven Rahmann: Fast Large Scale Oligonucleotide Selection Using the Longest Common Factor Approach. J. Bioinformatics and Computational Biology 1(2): 343-362 (2003)
6		Eric Rivals, Sven Rahmann: Combinatorics of periods in strings. J. Comb. Theory, Ser. A 104(1): 95-113 (2003)
	2002
5		Sven Rahmann: Rapid Large-Scale Oligonucleotide Selection for Microarrays. CSB 2002: 54-63
4		Sven Rahmann: Rapid Large-Scale Oligonucleotide Selection for Microarrays. WABI 2002: 434
	2001
3		Eric Rivals, Sven Rahmann: Combinatorics of Periods in Strings. ICALP 2001: 615-626
2		Tobias Müller, Sven Rahmann, Marc Rehmsmeier: Non-symmetric score matrices and the detection of homologous transmembrane proteins. ISMB (Supplement of Bioinformatics) 2001: 182-189
	2000
1		Sven Rahmann, Eric Rivals: Exact and Efficient Computation of the Expected Number of Missing and Common Words in Random Texts. CPM 2000: 375-387

Coauthor Index

1	Jan Baumbach	[20] [27] [29] [32] [38]
2	Jörg Ingo Baumbach	[27]
3	Frank Behler	[40]
4	Sebastian Böcker	[23]
5	Karina Brinkrolf	[20]
6	Alexander Bunkowski	[27]
7	Sérgio A. de Carvalho	[21] [33]
8	Thomas Dandekar	[10]
9	Christoph Dieterich	[17]
10	Cees H. Elzinga	[30]
11	Epameinondas Fritzilas	[37]
12	Christine Gräfe	[14]
13	Steffen Grossmann	[18]
14	Inke Herms	[35]
15	Jr.	[33]
16	Hans-Michael Kaltenbach	[23]
17	Gunnar W. Klau	[16] [22] [28]
18	Nils Kleinbölting	[27]
19	Thomas Kohl	[32]
20	Oliver Kramer	[40]
21	Sita Lange	[27]
22	Birong Liao	[19]
23	Francisco P. Lobo	[29]
24	Tobias Marschall	[36] [39] [40]
25	Tobias Müller	[2] [10]
26	Timm Oberwahrenbrock	[27]
27	Mathew J. Palakal	[19]
28	Utz J. Pape	[31] [34]
29	Susanne Ragg	[25]
30	Marc Rehmsmeier	[2]
31	Knut Reinert	[16] [28]
32	Yasmin A. Rios-Solis	[37]
33	Eric Rivals	[1] [3] [6] [8]
34	Stefan Roepcke	[18]
35	Alexander Schliep	[12] [16] [24] [28]
36	Jörg Schultz	[15]
37	Benjamin Schuster-Böckler	[15]
38	Christian Höner zu Siederdissen	[25]
39	Fengzhu Sun	[31]
40	Andreas Tauch	[20] [38]
41	David C. Torney	[12]
42	Martin Vingron	[16] [17] [18] [28] [31] [34]
43	Hui Wang	[30]
44	Jochen Weile	[32]
45	Tobias Wittkop	[20] [29] [32]
46	Matthias Wolf	[10]

Colors in the list of coauthors