 | 2008 |
| 21 |  | Woochang Hwang,
Taehyong Kim,
Murali Ramanathan,
Aidong Zhang:
Bridging centrality: graph mining from element level to group level.
KDD 2008: 336-344 |
| 20 |  | Young-Rae Cho,
Lei Shi,
Murali Ramanathan,
Aidong Zhang:
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge.
BMC Bioinformatics 9: (2008) |
| 19 |  | Woochang Hwang,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions.
BMC Bioinformatics 9: (2008) |
| 2007 |
| 18 |  | Woochang Hwang,
Taehyong Kim,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
SIGN: reliable protein interaction identification by integrating the Similarity In GO and the similarity in protein interaction Networks.
BIBE 2007: 1384-1388 |
| 17 |  | Young-Rae Cho,
Woochang Hwang,
Murali Ramanathan,
Aidong Zhang:
Semantic integration to identify overlapping functional modules in protein interaction networks.
BMC Bioinformatics 8: (2007) |
| 16 |  | Daxin Jiang,
Jian Pei,
Murali Ramanathan,
Chuan Lin,
Chun Tang,
Aidong Zhang:
Mining gene-sample-time microarray data: a coherent gene cluster discovery approach.
Knowl. Inf. Syst. 13(3): 305-335 (2007) |
| 2006 |
| 15 |  | Woochang Hwang,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
A novel functional module detection algorithm for protein-protein interaction networks.
Algorithms for Molecular Biology 1: (2006) |
| 14 |  | Kavitha Bhasi,
Li Zhang,
Daniel Brazeau,
Aidong Zhang,
Murali Ramanathan:
VizStruct for visualization of genome-wide SNP analyses.
Bioinformatics 22(13): 1569-1576 (2006) |
| 2005 |
| 13 |  | Kavitha Bhasi,
Alan Forrest,
Murali Ramanathan:
SPLINDID: a semi-parametric, model-based method for obtaining transcription rates and gene regulation parameters from genomic and proteomic expression profiles.
Bioinformatics 21(20): 3873-3879 (2005) |
| 12 |  | Liangjiang Wang,
Aidong Zhang,
Murali Ramanathan:
BioStar models of clinical and genomic data for biomedical data warehouse design.
IJBRA 1(1): 63-80 (2005) |
| 2004 |
| 11 |  | Daxin Jiang,
Jian Pei,
Murali Ramanathan,
Chun Tang,
Aidong Zhang:
Mining coherent gene clusters from gene-sample-time microarray data.
KDD 2004: 430-439 |
| 10 |  | Li Zhang,
Aidong Zhang,
Murali Ramanathan:
VizStruct: exploratory visualization for gene expression profiling.
Bioinformatics 20(1): 85-92 (2004) |
| 9 |  | Chun Tang,
Aidong Zhang,
Murali Ramanathan:
ESPD: a pattern detection model underlying gene expression profiles.
Bioinformatics 20(6): 829-838 (2004) |
| 2003 |
| 8 |  | Li Zhang,
Aidong Zhang,
Murali Ramanathan:
Enhanced visualization of time series through higher fourier harmonics.
BIOKDD 2003: 49-56 |
| 7 |  | Li Zhang,
Aidong Zhang,
Murali Ramanathan:
Fourier Harmonic Approach for Visualizing Temporal Patterns of Gene Expression Data.
CSB 2003: 137-147 |
| 6 |  | Chun Tang,
Li Zhang,
Aidong Zhang,
Murali Ramanathan:
Interrelated Clustering: An Approach for Gene Expression Data Analysis.
Computational Biology and Genome Informatics 2003: 183-206 |
| 5 |  | Jyotsna Kasturi,
Raj Acharya,
Murali Ramanathan:
An information theoretic approach for analyzing temporal patterns of gene expression.
Bioinformatics 19(4): 449-458 (2003) |
| 4 |  | Li Zhang,
Chun Tang,
Yuqing Song,
Aidong Zhang,
Murali Ramanathan:
VizCluster and its Application on Classifying Gene Expression Data.
Distributed and Parallel Databases 13(1): 73-97 (2003) |
| 2002 |
| 3 |  | Li Zhang,
Aidong Zhang,
Murali Ramanathan:
Visualized Classification of Multiple Sample Types.
BIOKDD 2002: 55-62 |
| 2 |  | Li Zhang,
Chun Tang,
Yong Shi,
Yuqing Song,
Aidong Zhang,
Murali Ramanathan:
VizCluster: An Interactive Visualization Approach to Cluster Analysis and Its Application on Microarray Data.
SDM 2002 |
| 2001 |
| 1 |  | Chun Tang,
Li Zhang,
Aidong Zhang,
Murali Ramanathan:
Interrelated Two-way Clustering: An Unsupervised Approach for Gene Expression Data Analysis.
BIBE 2001: 41-48 |