Shoba Ranganathan

	2008
30		Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair J. Nisbet, Shoba Ranganathan: In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer workflow platform with conventional database searches. BMC Bioinformatics 9(S-1): (2008)
29		Shoba Ranganathan, Michael Gribskov, Tin Wee Tan: Bioinformatics research in the Asia Pacific: a 2007 update. BMC Bioinformatics 9(S-1): (2008)
28		Khar Heng Choo, Joo Chuan Tong, Shoba Ranganathan: Modeling Escherichia coli signal peptidase complex with bound substrate: determinants in the mature peptide influencing signal peptide cleavage. BMC Bioinformatics 9(S-1): (2008)
27		Lesheng Kong, Shoba Ranganathan: Tandem duplication, circular permutation, molecular adaptation: how Solanaceae resist pests via inhibitors. BMC Bioinformatics 9(S-1): (2008)
26		Jitendra Gaikwad, Varun Khanna, Subramanyam Vemulpad, Joanne Jamie, Jim Kohen, Shoba Ranganathan: CMKb: a web-based prototype for integrating Australian Aboriginal customary medicinal plant knowledge. BMC Bioinformatics 9(S-12): (2008)
25		Shoba Ranganathan, Wen-Lian Hsu, Ueng-Cheng Yang, Tin Wee Tan: Emerging strengths in Asia Pacific bioinformatics. BMC Bioinformatics 9(S-12): (2008)
24		Khar Heng Choo, Shoba Ranganathan: Flanking signal and mature peptide residues influence signal peptide cleavage. BMC Bioinformatics 9(S-12): (2008)
23		Vladimir Brusic, Shoba Ranganathan: Critical technologies for bioinformatics. Briefings in Bioinformatics 9(4): 261-262 (2008)
	2007
22		Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan: In silico grouping of peptide/HLA class I complexes using structural interaction characteristics. Bioinformatics 23(2): 177-183 (2007)
21		Lawrence J. K. Wee, Tin Wee Tan, Shoba Ranganathan: CASVM: web server for SVM-based prediction of caspase substrates cleavage sites. Bioinformatics 23(23): 3241-3243 (2007)
20		Shivashankar H. Nagaraj, Robin B. Gasser, Shoba Ranganathan: A hitchhiker's guide to expressed sequence tag (EST) analysis. Briefings in Bioinformatics 8(1): 6-21 (2007)
19		Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan: Methods and protocols for prediction of immunogenic epitopes. Briefings in Bioinformatics 8(2): 96-108 (2007)
18		Kanagasabai Rajaraman, Khar Heng Choo, Shoba Ranganathan, Christopher J. O. Baker: A Workflow for Mutation Extraction and Structure Annotation. J. Bioinformatics and Computational Biology 5(6): 1319-1337 (2007)
17		Shivashankar H. Nagaraj, Nandan Deshpande, Robin B. Gasser, Shoba Ranganathan: ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform. Nucleic Acids Research 35(Web-Server-Issue): 143-147 (2007)
	2006
16		Shoba Ranganathan, Martti Tammi, Michael Gribskov, Tin Wee Tan: Establishing bioinformatics research in the Asia Pacific. BMC Bioinformatics 7(S-5): (2006)
15		Joo Chuan Tong, Tin Wee Tan, Animesh A. Sinha, Shoba Ranganathan: Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris. BMC Bioinformatics 7(S-5): (2006)
14		Lawrence J. K. Wee, Tin Wee Tan, Shoba Ranganathan: SVM-based prediction of caspase substrate cleavage sites. BMC Bioinformatics 7(S-5): (2006)
13		Joo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan: Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides. Bioinformatics 22(10): 1232-1238 (2006)
12		Johann Lenffer, Frank W. Nicholas, Kao Castle, Arjun Rao, Stefan Gregory, Michael Poidinger, Matthew D. Mailman, Shoba Ranganathan: OMIA (Online Mendelian Inheritance in Animals): an enhanced platform and integration into the Entrez search interface at NCBI. Nucleic Acids Research 34(Database-Issue): 599-601 (2006)
11		Durgaprasad Bollina, Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan: ASGS: an alternative splicing graph web service. Nucleic Acids Research 34(Web-Server-Issue): 444-447 (2006)
	2005
10		Durgaprasad Bollina, Bernett T. K. Lee, Shoba Ranganathan: MVC Architecture in Bioinformatics web applications and its Java implementation. iiWAS 2005: 759-764
9		Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan: SPdb - a signal peptide database. BMC Bioinformatics 6: 249 (2005)
	2004
8		Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan: DEDB: a database of Drosophila melanogaster exons in splicing graph form. BMC Bioinformatics 5: 189 (2004)
7		Lesheng Kong, Shoba Ranganathan: Delineation of modular proteins: Domain boundary prediction from sequence information. Briefings in Bioinformatics 5(2): 179-192 (2004)
6		Vivek Gopalan, Tin Wee Tan, Bernett T. K. Lee, Shoba Ranganathan: Xpro: database of eukaryotic protein-encoding genes. Nucleic Acids Research 32(Database-Issue): 59-63 (2004)
5		Lesheng Kong, Bernett Teck Kwong Lee, Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan: SDPMOD: an automated comparative modeling server for small disulfide-bonded proteins. Nucleic Acids Research 32(Web-Server-Issue): 356-359 (2004)
	2003
4		Vivek Gopalan, Tin Wee Tan, Shoba Ranganathan: XdomView: protein domain and exon position visualization. Bioinformatics 19(1): 159-160 (2003)
3		Kunde Ramamoorthy Govindarajan, Pandjassarame Kangueane, Tin Wee Tan, Shoba Ranganathan: MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules. Bioinformatics 19(2): 309-310 (2003)
2		Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan: MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences. Nucleic Acids Research 31(13): 3533-3536 (2003)
	2001
1		Russ B. Altman, Alfonso Valencia, Satoru Miyano, Shoba Ranganathan: Challenges for Intelligent Systems in Biology. IEEE Intelligent Systems 16(6): 14-20 (2001)

Coauthor Index

1	Russ B. Altman	[1]
2	J. Thomas August	[13]
3	Christopher J. O. Baker	[18]
4	Durgaprasad Bollina	[10] [11]
5	Vladimir Brusic	[13] [23]
6	Kao Castle	[12]
7	Khar Heng Choo	[9] [18] [24] [28]
8	Nandan Deshpande	[17]
9	Jitendra Gaikwad	[26]
10	Robin B. Gasser	[17] [20] [30]
11	Vivek Gopalan	[4] [6]
12	Kunde Ramamoorthy Govindarajan	[3]
13	Stefan Gregory	[12]
14	Michael Gribskov	[16] [29]
15	Wen-Lian Hsu	[25]
16	Joanne Jamie	[26]
17	Pandjassarame Kangueane	[3]
18	Varun Khanna	[26]
19	Jim Kohen	[26]
20	Lesheng Kong	[5] [7] [27]
21	Bernett T. K. Lee	[2] [6] [8] [10] [11]
22	Bernett Teck Kwong Lee	[5]
23	Johann Lenffer	[12]
24	Matthew D. Mailman	[12]
25	Satoru Miyano	[1]
26	Shivashankar H. Nagaraj	[17] [20] [30]
27	Frank W. Nicholas	[12]
28	Alasdair J. Nisbet	[30]
29	Michael Poidinger	[12]
30	Kanagasabai Rajaraman	[18]
31	Arjun Rao	[12]
32	Animesh A. Sinha	[15]
33	Martti Tammi	[16]
34	Tin Wee Tan	[2] [3] [4] [5] [6] [8] [9] [11] [13] [14] [15] [16] [19] [21] [22] [25] [29]
35	Joo Chuan Tong	[5] [13] [15] [19] [22] [28]
36	Alfonso Valencia	[1]
37	Subramanyam Vemulpad	[26]
38	Lawrence J. K. Wee	[14] [21]
39	Ueng-Cheng Yang	[25]
40	Guanglan Zhang	[13]

Colors in the list of coauthors