Benjamin J. Raphael

	2009
13		Ali Bashir, Qing Lu, Dennis Carson, Benjamin J. Raphael, Yu-Tsueng Liu, Vineet Bafna: Optimizing PCR Assays for DNA Based Cancer Diagnostics. RECOMB 2009: 220-235
12		Suzanne S. Sindi, Benjamin J. Raphael: Identification and Frequency Estimation of Inversion Polymorphisms from Haplotype Data. RECOMB 2009: 418-433
11		Crystal L. Kahn, Shay Mozes, Benjamin J. Raphael: Efficient Algorithms for Analyzing Segmental Duplications, Deletions, and Inversions in Genomes. WABI 2009: 169-180
10		Anna Ritz, Gregory Shakhnarovich, Arthur R. Salomon, Benjamin J. Raphael: Discovery of phosphorylation motif mixtures in phosphoproteomics data. Bioinformatics 25(1): 14-21 (2009)
9		Suzanne S. Sindi, Elena Helman, Ali Bashir, Benjamin J. Raphael: A geometric approach for classification and comparison of structural variants. Bioinformatics 25(12): (2009)
	2008
8		Crystal L. Kahn, Benjamin J. Raphael: Analysis of segmental duplications via duplication distance. ECCB 2008: 133-138
	2007
7		Erik Corona, Benjamin J. Raphael, Eleazar Eskin: Identification of Deletion Polymorphisms from Haplotypes. RECOMB 2007: 354-365
6		Ali Bashir, Yu-Tsueng Liu, Benjamin J. Raphael, Dennis Carson, Vineet Bafna: Optimization of primer design for the detection of variable genomic lesions in cancer. Bioinformatics 23(21): 2807-2815 (2007)
	2006
5		Eleazar Eskin, Trey Ideker, Benjamin J. Raphael, Christopher T. Workman: Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers Springer 2006
4		Neil C. Jones, Degui Zhi, Benjamin J. Raphael: AliWABA: alignment on the web through an A-Bruijn approach. Nucleic Acids Research 34(Web-Server-Issue): 613-616 (2006)
	2004
3		Benjamin J. Raphael, Pavel A. Pevzner: Reconstructing tumor amplisomes. ISMB/ECCB (Supplement of Bioinformatics) 2004: 265-273
2		Benjamin J. Raphael, Lung-Tien Liu, George Varghese: A Uniform Projection Method for Motif Discovery in DNA Sequences. IEEE/ACM Trans. Comput. Biology Bioinform. 1(2): 91-94 (2004)
	2003
1		Benjamin J. Raphael, Stanislav Volik, Colin Collins, Pavel A. Pevzner: Reconstructing tumor genome architectures. ECCB 2003: 162-171

Coauthor Index

1	Vineet Bafna	[6] [13]
2	Ali Bashir	[6] [9] [13]
3	Dennis Carson	[6] [13]
4	Colin Collins	[1]
5	Erik Corona	[7]
6	Eleazar Eskin	[5] [7]
7	Elena Helman	[9]
8	Trey Ideker	[5]
9	Neil C. Jones	[4]
10	Crystal L. Kahn	[8] [11]
11	Lung-Tien Liu	[2]
12	Yu-Tsueng Liu	[6] [13]
13	Qing Lu	[13]
14	Shay Mozes	[11]
15	Pavel A. Pevzner	[1] [3]
16	Anna Ritz	[10]
17	Arthur R. Salomon	[10]
18	Gregory Shakhnarovich	[10]
19	Suzanne S. Sindi	[9] [12]
20	George Varghese	[2]
21	Stanislav Volik	[1]
22	Christopher T. Workman	[5]
23	Degui Zhi	[4]

Colors in the list of coauthors