| 2009 | ||
|---|---|---|
| 20 | Daniel L. Rubin, Ion-Florin Talos, Michael Halle, Mark A. Musen, Ron Kikinis: Computational neuroanatomy: ontology-based representation of neural components and connectivity. BMC Bioinformatics 10(S-2): (2009) | |
| 19 | Daniel L. Rubin, Pattanasak Mongkolwat, Vladimir Kleper, Kaustubh Supekar, David S. Channin: Annotation and Image Markup: Accessing and Interoperating with the Semantic Content in Medical Imaging. IEEE Intelligent Systems 24(1): 57-65 (2009) | |
| 18 | Natalya Fridman Noy, Nigam H. Shah, Patricia L. Whetzel, Benjamin Dai, Michael Dorf, Nicholas Griffith, Clement Jonquet, Daniel L. Rubin, Margaret-Anne D. Storey, Christopher G. Chute, Mark A. Musen: BioPortal: ontologies and integrated data resources at the click of a mouse. Nucleic Acids Research 37(Web-Server-Issue): 170-173 (2009) | |
| 2008 | ||
| 17 | Natalya Fridman Noy, Nigam Shah, Benjamin Dai, Michael Dorf, Nicholas Griffith, Clement Jonquet, Michael Montegut, Daniel L. Rubin, Cherie Youn, Mark A. Musen: BioPortal: A Web Repository for Biomedical Ontologies and Data Resources. International Semantic Web Conference (Posters & Demos) 2008 | |
| 16 | Graham L. Poulter, Daniel L. Rubin, Russ B. Altman, Cathal Seoighe: MScanner: a classifier for retrieving Medline citations. BMC Bioinformatics 9: (2008) | |
| 15 | Daniel L. Rubin, Nigam Shah, Natalya Fridman Noy: Biomedical ontologies: a functional perspective. Briefings in Bioinformatics 9(1): 75-90 (2008) | |
| 14 | Daniel L. Rubin: Creating and Curating a Terminology for Radiology: Ontology Modeling and Analysis. J. Digital Imaging 21(4): 355-362 (2008) | |
| 13 | Natalya Fridman Noy, Daniel L. Rubin: Translating the Foundational Model of Anatomy into OWL. J. Web Sem. 6(2): 133-136 (2008) | |
| 12 | Ion-Florin Talos, Daniel L. Rubin, Michael Halle, Mark A. Musen, Ron Kikinis: A prototype symbolic model of canonical functional neuroanatomy of the motor system. Journal of Biomedical Informatics 41(2): 251-263 (2008) | |
| 2007 | ||
| 11 | Woei-Jyh Lee, Louiqa Raschid, Padmini Srinivasan, Nigam Shah, Daniel L. Rubin, Natasha Fridman Noy: Using Annotations from Controlled Vocabularies to Find Meaningful Associations. DILS 2007: 247-263 | |
| 10 | Kaustubh Supekar, Daniel L. Rubin, Natasha F. Noy, Mark A. Musen: Knowledge Zone: A Public Repository of Peer-Reviewed Biomedical Ontologies. MedInfo 2007: 812-816 | |
| 9 | Nigam H. Shah, Daniel L. Rubin, Inigo Espinosa, Kelli Montgomery, Mark A. Musen: Annotation and query of tissue microarray data using the NCI Thesaurus. BMC Bioinformatics 8: (2007) | |
| 2006 | ||
| 8 | Daniel L. Rubin, Olivier Dameron, Yasser Bashir, David Grossman, Parvati Dev, Mark A. Musen: Using ontologies linked with geometric models to reason about penetrating injuries. Artificial Intelligence in Medicine 37(3): 167-176 (2006) | |
| 7 | Charles E. Kahn, David S. Channin, Daniel L. Rubin: An Ontology for PACS Integration. J. Digital Imaging 19(4): 316-327 (2006) | |
| 2004 | ||
| 6 | Elizabeth S. Burnside, Daniel L. Rubin, Ross D. Shachter: Improving a Bayesian network's ability to predict the probability of malignancy of microcalcifications on mammography. CARS 2004: 1021-1026 | |
| 5 | Natalya Fridman Noy, Daniel L. Rubin, Mark A. Musen: Making Biomedical Ontologies and Ontology Repositories Work. IEEE Intelligent Systems 19(6): 78-81 (2004) | |
| 2002 | ||
| 4 | Daniel L. Rubin, Farhad Shafa, Diane E. Oliver, Micheal Hewett, Russ B. Altman: Representing genetic sequence data for pharmacogenomics: an evolutionary approach using ontological and relational models. ISMB 2002: 207-215 | |
| 3 | Diane E. Oliver, Daniel L. Rubin, Joshua M. Stuart, Micheal Hewett, Teri E. Klein, Russ B. Altman: Ontology Development for a Pharmacogenetics Knowledge Base. Pacific Symposium on Biocomputing 2002: 65-76 | |
| 2 | Daniel L. Rubin, Micheal Hewett, Diane E. Oliver, Teri E. Klein, Russ B. Altman: Automating Data Acquisition into Ontologies from Pharmacogenetics Relational Data Sources Using Declarative Object Definitions and XML. Pacific Symposium on Biocomputing 2002: 88-99 | |
| 1 | Micheal Hewett, Diane E. Oliver, Daniel L. Rubin, Katrina L. Easton, Joshua M. Stuart, Russ B. Altman, Teri E. Klein: PharmGKB: the Pharmacogenetics Knowledge Base. Nucleic Acids Research 30(1): 163-165 (2002) | |