Nagiza F. Samatova

	2009
36		Wenbin Chen, Matthew C. Schmidt, Wenhong Tian, Nagiza F. Samatova: A Fast, Accurate Algorithm for Identifying Functional Modules Through Pairwise Local Alignment of Protein Interaction Networks. BIOCOMP 2009: 816-821
35		Paul Breimyer, Guruprasad Kora, Nagiza F. Samatova: Web-Enabled R for Large-Scale Collaborative Data Mining: A Survey. IKE 2009: 615-621
34		Paul Breimyer, William Hendrix, Guruprasad Kora, Nagiza F. Samatova: pR: Lightweight, Easy-to-Use Middleware to Plugin Parallel Analytical Computing with R. IKE 2009: 667-673
33		Amit Awekar, Nagiza F. Samatova, Paul Breimyer: Incremental All Pairs Similarity Search for Varying Similarity Thresholds with Reduced I/O Overhead. IKE 2009: 687-693
32		William Hendrix, Matthew C. Schmidt, Paul Breimyer, Nagiza F. Samatova: On perturbation theory and an algorithm for maximal clique enumeration in uncertain and noisy graphs. KDD Workshop on Knowledge Discovery from Uncertain Data 2009: 48-56
31		Amit C. Awekar, Nagiza F. Samatova: Fast Matching for All Pairs Similarity Search. Web Intelligence 2009: 295-300
30		Matthew C. Schmidt, Nagiza F. Samatova, Kevin Thomas, Byung-Hoon Park: A scalable, parallel algorithm for maximal clique enumeration. J. Parallel Distrib. Comput. 69(4): 417-428 (2009)
29		Wenbin Chen, Matthew C. Schmidt, Nagiza F. Samatova: On parameterized complexity of the Multi-MCS problem. Theor. Comput. Sci. 410(21-23): 2024-2032 (2009)
	2008
28		Byung-Hoon Park, Nagiza F. Samatova, Rajesh Munavalli, Ramya Krishnamurthy, Houssain Kettani, Al Geist: Rapid and robust ranking of text documents in a dynamically changing corpus. AICCSA 2008: 149-155
27		Byung-Hoon Park, Matthew C. Schmidt, Kevin Thomas, Tatiana V. Karpinets, Nagiza F. Samatova: Parallel, scalable, memory-efficient backtracking for combinatoria modeling of large-scale biological systems. IPDPS 2008: 1-8
26		Heshan Lin, Xiaosong Ma, Jiangtian Li, Ting Yu, Nagiza F. Samatova: Adaptive Request Scheduling for Parallel Scientific Web Services. SSDBM 2008: 276-294
25		Bing Zhang, Byung-Hoon Park, Tatiana V. Karpinets, Nagiza F. Samatova: From pull-down data to protein interaction networks and complexes with biological relevance. Bioinformatics 24(7): 979-986 (2008)
	2007
24		Faisal N. Abu-Khzam, Nagiza F. Samatova, Mohamad A. Rizk, Michael A. Langston: The Maximum Common Subgraph Problem: Faster Solutions via Vertex Cover. AICCSA 2007: 367-373
23		Byung-Hoon Park, Bing Zhang, Tatiana V. Karpinets, Nagiza F. Samatova: Multi-stage Framework to Infer Protein Functional Modules from Mass Spectrometry Pull-Down Data with Assessment of Biological Relevance. BIBM 2007: 223-229
22		Xiaosong Ma, Jiangtian Li, Nagiza F. Samatova: Automatic Parallelization of Scripting Languages: Toward Transparent Desktop Parallel Computing. IPDPS 2007: 1-6
21		Faisal N. Abu-Khzam, Mohamad A. Rizk, Deema A. Abdallah, Nagiza F. Samatova: The Buffered Work-Pool Approach for Search-Tree Based Optimization Algorithms. PPAM 2007: 170-179
20		Byung-Hoon Park, George Ostrouchov, Nagiza F. Samatova: Sampling streaming data with replacement. Computational Statistics & Data Analysis 52(2): 750-762 (2007)
19		Robert Sisneros, Chad Jones, Jian Huang, Jinzhu Gao, Byung-Hoon Park, Nagiza F. Samatova: A Multi-Level Cache Model for Run-Time Optimization of Remote Visualization. IEEE Trans. Vis. Comput. Graph. 13(5): 991-1003 (2007)
	2006
18		Christopher T. Symons, Nagiza F. Samatova, Ramya Krishnamurthy, Byung-Hoon Park, Tarik Umar, David Buttler, Terence Critchlow, David Hysom: Multi-Criterion Active Learning in Conditional Random Fields. ICTAI 2006: 323-331
17		James M. McCollum, Gregory D. Peterson, Chris D. Cox, Michael L. Simpson, Nagiza F. Samatova: The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior. Computational Biology and Chemistry 30(1): 39-49 (2006)
	2005
16		W. Henry Suters, Faisal N. Abu-Khzam, Yun Zhang, Christopher T. Symons, Nagiza F. Samatova, Michael A. Langston: A New Approach and Faster Exact Methods for the Maximum Common Subgraph Problem. COCOON 2005: 717-727
15		Brandon Thurmon, James M. McCollum, Gregory D. Peterson, Chris D. Cox, Nagiza F. Samatova, Gary Sayler, Michael L. Simpson: Accelerating Exact Stochastic Simulation Using Reconfigurable Computing. ERSA 2005: 105-111
14		Heshan Lin, Xiaosong Ma, Praveen Chandramohan, Al Geist, Nagiza F. Samatova: Efficient Data Access for Parallel BLAST. IPDPS 2005
13		Srikanth B. Yoginath, Nagiza F. Samatova, David Bauer, Guruprasad Kora, George Fann, Al Geist: RScaLAPACK: High-Performance Parallel Statistical Computing with R and ScaLAPACK. ISCA PDCS 2005: 61-67
12		Yun Zhang, Faisal N. Abu-Khzam, Nicole E. Baldwin, Elissa J. Chesler, Michael A. Langston, Nagiza F. Samatova: Genome-Scale Computational Approaches to Memory-Intensive Applications in Systems Biology. SC 2005: 12
11		George Ostrouchov, Nagiza F. Samatova: On FastMap and the Convex Hull of Multivariate Data: Toward Fast and Robust Dimension Reduction. IEEE Trans. Pattern Anal. Mach. Intell. 27(8): 1340-1343 (2005)
	2004
10		Gong-Xin Yu, Byung-Hoon Park, Praveen Chandramohan, Al Geist, Nagiza F. Samatova: In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate Specificity. CSB 2004: 696-697
9		Byung-Hoon Park, George Ostrouchov, Nagiza F. Samatova, Al Geist: Reservoir-Based Random Sampling with Replacement from Data Stream. SDM 2004
	2003
8		Gong-Xin Yu, George Ostrouchov, Al Geist, Nagiza F. Samatova: An SVM-based Algorithm for Identification of Photosynthesis-specific Genome Features. CSB 2003: 235-243
7		Byung-Hoon Park, George Ostrouchov, Gong-Xin Yu, Al Geist, Andrey Gorin, Nagiza F. Samatova: Inference of Protein-Protein Interactions by Unlikely Profile Pair. ICDM 2003: 735-738
6		E. Wes Bethel, Greg Abram, John Shalf, Randy Frank, James P. Ahrens, Steve Parker, Nagiza F. Samatova, Mark Miller: Interoperability of Visualization Software and Data Models is NOT an Achievable Goal. IEEE Visualization 2003: 607-610
	2002
5		Thomas E. Potok, Mark T. Elmore, Joel W. Reed, Nagiza F. Samatova: An Ontology-Based HTML to XML Conversion Using Intelligent Agents. HICSS 2002: 120
4		Faisal N. Abu-Khzam, Nagiza F. Samatova, George Ostrouchov, Michael A. Langston, Al Geist: Distributed Dimension Reduction Algorithms for Widely Dispersed Data. IASTED PDCS 2002: 167-174
3		Nagiza F. Samatova, Al Geist, George Ostrouchov, Anatoli V. Melechko: Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways. IPDPS 2002
2		Nagiza F. Samatova, George Ostrouchov, Al Geist, Anatoli V. Melechko: RACHET: An Efficient Cover-Based Merging of Clustering Hierarchies from Distributed Datasets. Distributed and Parallel Databases 11(2): 157-180 (2002)
	2000
1		Thomas E. Potok, Nenad Ivezic, Nagiza F. Samatova: Agent-based Architecture for Flexible Lean Cell Design, Analysis and Evaluation. DIISM 2000: 181-188

Coauthor Index

1	Deema A. Abdallah	[21]
2	Greg Abram	[6]
3	Faisal N. Abu-Khzam	[4] [12] [16] [21] [24]
4	James P. Ahrens	[6]
5	Amit Awekar	[33]
6	Amit C. Awekar	[31]
7	Nicole E. Baldwin	[12]
8	David Bauer	[13]
9	E. Wes Bethel (Wes Bethel)	[6]
10	Paul Breimyer	[32] [33] [34] [35]
11	David Buttler	[18]
12	Praveen Chandramohan	[10] [14]
13	Wenbin Chen	[29] [36]
14	Elissa J. Chesler	[12]
15	Chris D. Cox	[15] [17]
16	Terence Critchlow	[18]
17	Mark T. Elmore	[5]
18	George Fann	[13]
19	Randy Frank	[6]
20	Jinzhu Gao	[19]
21	Al Geist (G. A. Geist II)	[2] [3] [4] [7] [8] [9] [10] [13] [14] [28]
22	Andrey Gorin	[7]
23	William Hendrix	[32] [34]
24	Jian Huang	[19]
25	David Hysom	[18]
26	Nenad Ivezic	[1]
27	Chad Jones	[19]
28	Tatiana V. Karpinets	[23] [25] [27]
29	Houssain Kettani	[28]
30	Guruprasad Kora	[13] [34] [35]
31	Ramya Krishnamurthy	[18] [28]
32	Michael A. Langston	[4] [12] [16] [24]
33	Jiangtian Li	[22] [26]
34	Heshan Lin	[14] [26]
35	Xiaosong Ma	[14] [22] [26]
36	James M. McCollum	[15] [17]
37	Anatoli V. Melechko	[2] [3]
38	Mark Miller	[6]
39	Rajesh Munavalli	[28]
40	George Ostrouchov	[2] [3] [4] [7] [8] [9] [11] [20]
41	Byung-Hoon Park	[7] [9] [10] [18] [19] [20] [23] [25] [27] [28] [30]
42	Steve Parker	[6]
43	Gregory D. Peterson	[15] [17]
44	Thomas E. Potok	[1] [5]
45	Joel W. Reed	[5]
46	Mohamad A. Rizk	[21] [24]
47	Gary Sayler	[15]
48	Matthew C. Schmidt	[27] [29] [30] [32] [36]
49	John Shalf	[6]
50	Michael L. Simpson	[15] [17]
51	Robert Sisneros	[19]
52	W. Henry Suters	[16]
53	Christopher T. Symons	[16] [18]
54	Kevin Thomas	[27] [30]
55	Brandon Thurmon	[15]
56	Wenhong Tian	[36]
57	Tarik Umar	[18]
58	Srikanth B. Yoginath	[13]
59	Gong-Xin Yu	[7] [8] [10]
60	Ting Yu	[26]
61	Bing Zhang	[23] [25]
62	Yun Zhang	[12] [16]

Colors in the list of coauthors