Ron Shamir Coauthor index pubzone.org

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131Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Renana Meller, Martin Kupiec, Ron Shamir: Understanding Gene Sequence Variation in the Context of Transcription Regulation in Yeast. RECOMB 2011: 69
130Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMukul S. Bansal, Ron Shamir: A Note on the Fixed Parameter Tractability of the Gene-Duplication Problem. IEEE/ACM Trans. Comput. Biology Bioinform. 8(3): 848-850 (2011)
129Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: An O(n3/2sqrt(log(n))) algorithm for sorting by reciprocal translocations. J. Discrete Algorithms 9(4): 344-357 (2011)
128Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLArnon Paz, Zippora Brownstein, Yaara Ber, Shani Bialik, Eyal David, Dorit Sagir, Igor Ulitsky, Ran Elkon, Adi Kimchi, Karen B. Avraham, Yosef Shiloh, Ron Shamir: SPIKE: a database of highly curated human signaling pathways. Nucleic Acids Research 39(Database-Issue): 793-799 (2011)
2010
127Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLYonit Halperin, Chaim Linhart, Igor Ulitsky, Ron Shamir: Discovering Transcriptional Modules by Combined Analysis of Expression Profiles and Regulatory Sequences. RECOMB 2010: 578-579
126Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMukul S. Bansal, J. Peter Gogarten, Ron Shamir: Detecting Highways of Horizontal Gene Transfer. RECOMB-CG 2010: 109-120
2009
125Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSharon Bruckner, Falk Hüffner, Richard M. Karp, Ron Shamir, Roded Sharan: Topology-Free Querying of Protein Interaction Networks. RECOMB 2009: 74-89
124Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFiras Swidan, Ron Shamir: Assessing the Quality of Whole Genome Alignments in Bacteria. Adv. Bioinformatics 2009: (2009)
123Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIgor Ulitsky, Ron Shamir: Identifying functional modules using expression profiles and confidence-scored protein interactions. Bioinformatics 25(9): 1158-1164 (2009)
122Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChaim Linhart, Ron Shamir: Matching with don't-cares and a small number of mismatches. Inf. Process. Lett. 109(5): 273-277 (2009)
121Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChaim Linhart, Ron Shamir: Faster pattern matching with character classes using prime number encoding. J. Comput. Syst. Sci. 75(3): 155-162 (2009)
120Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSharon Bruckner, Falk Hüffner, Richard M. Karp, Ron Shamir, Roded Sharan: Torque: topology-free querying of protein interaction networks. Nucleic Acids Research 37(Web-Server-Issue): 106-108 (2009)
2008
119Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIgor Ulitsky, Richard M. Karp, Ron Shamir: Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles. RECOMB 2008: 347-359
118Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: Sorting Cancer Karyotypes by Elementary Operations. RECOMB-CG 2008: 211-225
117Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ziv-Ukelson, Irit Gat-Viks, Ydo Wexler, Ron Shamir: A Faster Algorithm for RNA Co-folding. WABI 2008: 174-185
116Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRan Elkon, Rita Vesterman, Nira Amit, Igor Ulitsky, Idan Zohar, Mali Weisz, Gilad Mass, Nir Orlev, Giora Sternberg, Ran Blekhman, Jackie Assa, Yosef Shiloh, Ron Shamir: SPIKE - a database, visualization and analysis tool of cellular signaling pathways. BMC Bioinformatics 9: (2008)
115Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTamar Barzuza, Jacques S. Beckmann, Ron Shamir, Itsik Pe'er: Computational Problems in Perfect Phylogeny Haplotyping: Typing without Calling the Allele. IEEE/ACM Trans. Comput. Biology Bioinform. 5(1): 101-109 (2008)
114Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: Sorting Genomes with Centromeres by Translocations. Journal of Computational Biology 15(7): 793-812 (2008)
113Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDaniela Raijman, Ron Shamir, Amos Tanay: Evolution and Selection in Yeast Promoters: Analyzing the Combined Effect of Diverse Transcription Factor Binding Sites. PLoS Computational Biology 4(1): (2008)
2007
112Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: Rearrangements in Genomes with Centromeres Part I: Translocations. RECOMB 2007: 339-353
111Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOfir Davidovich, Gad Kimmel, Ron Shamir: GEVALT: An integrated software tool for genotype analysis. BMC Bioinformatics 8: (2007)
110Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSorin Istrail, Pavel A. Pevzner, Ron Shamir: Preface. Discrete Applied Mathematics 155(6-7): 673-674 (2007)
109Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRichard M. Karp, Ming Li, Pavel A. Pevzner, Ron Shamir: Special issue on computational molecular biology. J. Comput. Syst. Sci. 73(7): 1023 (2007)
108Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: Sorting by Reciprocal Translocations via Reversals Theory. Journal of Computational Biology 14(4): 408-422 (2007)
107Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: Improved algorithms for the random cluster graph model. Random Struct. Algorithms 31(4): 418-449 (2007)
2006
106Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: An O(n3/2sqrt(log n)) Algorithm for Sorting by Reciprocal Translocations. CPM 2006: 258-269
105Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: Sorting by Translocations Via Reversals Theory. Comparative Genomics 2006: 87-98
104Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir: Some Computational Challenges in Today's Bio-medicine. ESA 2006: 3
103Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTzvika Hartman, Ron Shamir: A simpler and faster 1.5-approximation algorithm for sorting by transpositions. Inf. Comput. 204(2): 275-290 (2006)
102Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Shamir: A Probabilistic Methodology for Integrating Knowledge and Experiments on Biological Networks. Journal of Computational Biology 13(2): 165-181 (2006)
101Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Richard M. Karp, Ron Shamir, Roded Sharan: Reconstructing Chain Functions in Genetic Networks. SIAM J. Discrete Math. 20(3): 727-740 (2006)
2005
100Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEran Halperin, Gad Kimmel, Ron Shamir: Tag SNP selection in genotype data for maximizing SNP prediction accuracy. ISMB (Supplement of Bioinformatics) 2005: 195-203
99Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Shamir: The Factor Graph Network Model for Biological Systems. RECOMB 2005: 31-47
98Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Adi Maron-Katz, Amos Tanay, Chaim Linhart, Israel Steinfeld, Roded Sharan, Yosef Shiloh, Ran Elkon: EXPANDER - an integrative program suite for microarray data analysis. BMC Bioinformatics 6: 232 (2005)
97Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGideon Dror, Rotem Sorek, Ron Shamir: Accurate identification of alternatively spliced exons using support vector machine. Bioinformatics 21(7): 897-901 (2005)
96Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGad Kimmel, Ron Shamir: The Incomplete Perfect Phylogeny Haplotype Problem. J. Bioinformatics and Computational Biology 3(2): 359-384 (2005)
95Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRichard M. Karp, Ming Li, Pavel A. Pevzner, Ron Shamir: Guest Editors' foreword. J. Comput. Syst. Sci. 70(3): 283- (2005)
94Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGad Kimmel, Ron Shamir: A Block-Free Hidden Markov Model for Genotypes and Its Application to Disease Association. Journal of Computational Biology 12(10): 1243-1260 (2005)
93Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChaim Linhart, Ron Shamir: The Degenerate Primer Design Problem: Theory and Applications. Journal of Computational Biology 12(4): 431-456 (2005)
92Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRoded Sharan, Trey Ideker, Brian P. Kelley, Ron Shamir, Richard M. Karp: Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data. Journal of Computational Biology 12(6): 835-846 (2005)
2004
91Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTamar Barzuza, Jacques S. Beckmann, Ron Shamir, Itsik Pe'er: Computational Problems in Perfect Phylogeny Haplotyping: Xor-Genotypes and Tag SNPs. CPM 2004: 14-31
90Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir: Computational Dissection of Regulatory Networks Using Diverse High-Throughput Data. CSB 2004: 2-3
89Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Ron Shamir, Richard M. Karp, Roded Sharan: Reconstructing Chain Functions in Genetic Networks. Pacific Symposium on Biocomputing 2004: 498-509
88Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGad Kimmel, Ron Shamir: Maximum likelihood resolution of multi-block genotypes. RECOMB 2004: 2-9
87Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRoded Sharan, Trey Ideker, Brian P. Kelley, Ron Shamir, Richard M. Karp: Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. RECOMB 2004: 282-289
86Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Amos Tanay, Ron Shamir: Modeling and Analysis of Heterogeneous Regulation in Biological Networks. Regulatory Genomics 2004: 98-113
85Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNir Orlev, Ron Shamir, Yosef Shiloh: PIVOT: Protein Interacions VisualizatiOn Tool. Bioinformatics 20(3): 424-425 (2004)
84Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Roded Sharan: A fully dynamic algorithm for modular decomposition and recognition of cographs. Discrete Applied Mathematics 136(2-3): 329-340 (2004)
83Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRyan B. Hayward, Ron Shamir: A note on tolerance graph recognition. Discrete Applied Mathematics 143(1-3): 307-311 (2004)
82Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Roded Sharan, Dekel Tsur: Cluster graph modification problems. Discrete Applied Mathematics 144(1-2): 173-182 (2004)
81Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGad Kimmel, Roded Sharan, Ron Shamir: Computational Problems in Noisy SNP and Haplotype Analysis: Block Scores, Block Identification, and Population Stratification. INFORMS Journal on Computing 16(4): 360-370 (2004)
80Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmos Tanay, Ron Shamir: Multilevel Modeling and Inference of Transcription Regulation. Journal of Computational Biology 11(2/3): 357-375 (2004)
79Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Amos Tanay, Ron Shamir: Modeling and Analysis of Heterogeneous Regulation in Biological Networks. Journal of Computational Biology 11(6): 1034-1049 (2004)
78Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Tal Pupko, Ron Shamir, Roded Sharan: Incomplete Directed Perfect Phylogeny. SIAM J. Comput. 33(3): 590-607 (2004)
2003
77Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Ron Shamir: Chain functions and scoring functions in genetic networks. ISMB (Supplement of Bioinformatics) 2003: 108-117
76Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmos Tanay, Ron Shamir: Modeling transcription programs: inferring binding site activity and dose-response model optimization. RECOMB 2003: 301-310
75Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGad Kimmel, Roded Sharan, Ron Shamir: Identifying Blocks and Sub-populations in Noisy SNP Data. WABI 2003: 303-319
74Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRoded Sharan, Adi Maron-Katz, Ron Shamir: CLICK and EXPANDER: a system for clustering and visualizing gene expression data. Bioinformatics 19(14): 1787-1799 (2003)
73Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIrit Gat-Viks, Roded Sharan, Ron Shamir: Scoring clustering solutions by their biological relevance. Bioinformatics 19(18): 2381-2389 (2003)
72Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Ozery-Flato, Ron Shamir: Two Notes on Genome Rearrangement. J. Bioinformatics and Computational Biology 1(1): 71-94 (2003)
71Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmir Ben-Dor, Richard M. Karp, Benno Schwikowski, Ron Shamir: The Restriction Scaffold Problem. Journal of Computational Biology 10(3/4): 385-398 (2003)
70Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEran Halperin, Shay Halperin, Tzvika Hartman, Ron Shamir: Handling Long Targets and Errors in Sequencing by Hybridization. Journal of Computational Biology 10(3/4): 483-497 (2003)
2002
69no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmos Tanay, Roded Sharan, Ron Shamir: Discovering statistically significant biclusters in gene expression data. ISMB 2002: 136-144
68no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChaim Linhart, Ron Shamir: The degenerate primer design problem. ISMB 2002: 172-181
67Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEran Halperin, Shay Halperin, Tzvika Hartman, Ron Shamir: Handling long targets and errors in sequencing by hybridization. RECOMB 2002: 176-185
66Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmir Ben-Dor, Richard M. Karp, Benno Schwikowski, Ron Shamir: The restriction scaffold problem. RECOMB 2002: 58-66
65Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: Improved Algorithms for the Random Cluster Graph Model. SWAT 2002: 230-239
64Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir, Roded Sharan: On the Generality of Phylogenies from Incomplete Directed Characters. SWAT 2002: 358-367
63Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Roded Sharan, Dekel Tsur: Cluster Graph Modification Problems. WG 2002: 379-390
62Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMing Li, Pavel A. Pevzner, Ron Shamir: Foreword. J. Comput. Syst. Sci. 65(3): 441 (2002)
61no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmir Ben-Dor, Itsik Pe'er, Ron Shamir, Roded Sharan: On the Complexity of Positional Sequencing by Hybridization. Journal of Computational Biology 8(4): 361-371 (2002)
60no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: Large Scale Sequencing by Hybridization. Journal of Computational Biology 9(2): 413-428 (2002)
2001
59no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmos Tanay, Ron Shamir: Computational expansion of genetic networks. ISMB (Supplement of Bioinformatics) 2001: 270-278
58Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: Large scale sequencing by hybridization. RECOMB 2001: 269-277
57Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTal Pupko, Roded Sharan, Masami Hasegawa, Ron Shamir, Dan Graur: A Chemical-Distance-Based Test for Positive Darwinian Selection. WABI 2001: 142-155
56Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAssaf Natanzon, Ron Shamir, Roded Sharan: Complexity classification of some edge modification problems. Discrete Applied Mathematics 113(1): 109-128 (2001)
55Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPiotr Berman, Amir Ben-Dor, Itsik Pe'er, Roded Sharan, Ron Shamir: On the Complexity of Positional Sequencing by Hybridization Electronic Colloquium on Computational Complexity (ECCC) 8(54): (2001)
54Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPavol Hell, Ron Shamir, Roded Sharan: A Fully Dynamic Algorithm for Recognizing and Representing Proper Interval Graphs. SIAM J. Comput. 31(1): 289-305 (2001)
2000
53Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir, Roded Sharan: Incomplete Directed Perfect Phylogeny. CPM 2000: 143-153
52no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir: Spectrum Alignment: Efficient Resequencing by Hybridization. ISMB 2000: 260-268
51no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRoded Sharan, Ron Shamir: Center CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis. ISMB 2000: 307-316
50Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSorin Istrail, Pavel A. Pevzner, Ron Shamir: Foreword. Discrete Applied Mathematics 104(1-3): 1-2 (2000)
49Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErez Hartuv, Ron Shamir: A clustering algorithm based on graph connectivity. Inf. Process. Lett. 76(4-6): 175-181 (2000)
48no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRichard M. Karp, Ron Shamir: Algorithms for Optical Mapping. Journal of Computational Biology 7(1-2): 303-316 (2000)
47no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir: Preface: Special RECOMB 2000 Issue. Journal of Computational Biology 7(3-4): 329-330 (2000)
46no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRichard M. Karp, Itsik Pe'er, Ron Shamir: An Algorithm Combining Discrete and Continuous Methods for Optical Mapping. Journal of Computational Biology 7(5): 745-760 (2000)
45Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAssaf Natanzon, Ron Shamir, Roded Sharan: A Polynomial Approximation Algorithm for the Minimum Fill-In Problem. SIAM J. Comput. 30(4): 1067-1079 (2000)
1999
44Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmir Ben-Dor, Itsik Pe'er, Ron Shamir, Roded Sharan: On the Complexity of Positional Sequencing by Hybridization. CPM 1999: 88-100
43Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPavol Hell, Ron Shamir, Roded Sharan: A Fully Dynamic Algorithm for Recognizing and Representing Proper Interval Graphs. ESA 1999: 527-539
42no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRichard M. Karp, Itsik Pe'er, Ron Shamir: An Algorithm Combining Discrete and Continuous Methods for Optical Mapping. ISMB 1999: 159-168
41Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErez Hartuv, Armin O. Schmitt, Jörg Lange, Sebastian Meier-Ewert, Hans Lehrach, Ron Shamir: An algorithm for clustering cDNAs for gene expression analysis. RECOMB 1999: 188-197
40Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGuy Mayraz, Ron Shamir: Construction of physical maps from oligonucleotide fingerprints data. RECOMB 1999: 268-277
39Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAssaf Natanzon, Ron Shamir, Roded Sharan: Complexity Classification of Some Edge Modification Problems. WG 1999: 65-77
38Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir: Bounded Degree Interval Sandwich Problems. Algorithmica 24(2): 96-104 (1999)
37Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: Faster Subtree Isomorphism. J. Algorithms 33(2): 267-280 (1999)
36no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGuy Mayraz, Ron Shamir: Construction of Physical Maps from Oligonucleotide Fingerprints Data. Journal of Computational Biology 6(2): 237-252 (1999)
35no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAmir Ben-Dor, Ron Shamir, Zohar Yakhini: Clustering Gene Expression Patterns. Journal of Computational Biology 6(3/4): 281-297 (1999)
34Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir, Robert Endre Tarjan: Tractability of Parameterized Completion Problems on Chordal, Strongly Chordal, and Proper Interval Graphs. SIAM J. Comput. 28(5): 1906-1922 (1999)
33Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir, Robert Endre Tarjan: A Faster and Simpler Algorithm for Sorting Signed Permutations by Reversals. SIAM J. Comput. 29(3): 880-892 (1999)
1998
32Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRichard M. Karp, Ron Shamir: Algorithms for optical mapping. RECOMB 1998: 117-124
31Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: The Maximum Subforest Problem: Approximation and Exact Algorithms (Extended Abstract). SODA 1998: 394-399
30Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAssaf Natanzon, Ron Shamir, Roded Sharan: A Polynomial Approximation Algorithm for the Minimum Fill-In Problem. STOC 1998: 41-47
29Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSorin Istrail, Pavel A. Pevzner, Ron Shamir: Foreword. Discrete Applied Mathematics 88(1-3): 3-6 (1998)
28Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir: The median problems for breakpoints are NP-complete Electronic Colloquium on Computational Complexity (ECCC) 5(71): (1998)
1997
27Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Dekel Tsur: Faster subtree isomorphism. ISTCS 1997: 126-131
26Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir, Robert Endre Tarjan: Faster and simpler algorithm for sorting signed permutations by reversals. RECOMB 1997: 163
25Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir, Robert Endre Tarjan: Faster and Simpler Algorithm for Sorting Signed Permutations by Reversals. SODA 1997: 344-351
24Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir: Realizing Interval Graphs with Size and Distance Constraints. SIAM J. Discrete Math. 10(4): 662-687 (1997)
23Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir: Satisfiability Problems on Intervals and Unit Intervals. Theor. Comput. Sci. 175(2): 349-372 (1997)
1996
22no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir: Physical Maps and Interval Sandwich Problems: Bounded Degrees Help. ISTCS 1996: 195-201
21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir: Pathwidth, Bandwidth, and Completion Problems to Proper Interval Graphs with Small Cliques. SIAM J. Comput. 25(3): 540-561 (1996)
1995
20Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLItsik Pe'er, Ron Shamir: Interval Graphs with Side (and Size) Constraints. ESA 1995: 142-154
19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMartin Charles Golumbic, Haim Kaplan, Ron Shamir: Graph Sandwich Problems. J. Algorithms 19(3): 449-473 (1995)
18no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaul W. Goldberg, Martin Charles Golumbic, Haim Kaplan, Ron Shamir: Four Strikes Against Physical Mapping of DNA. Journal of Computational Biology 2(1): 139-152 (1995)
1994
17Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir, Robert Endre Tarjan: Tractability of parameterized completion problems on chordal and interval graphs: Minimum Fill-in and Physical Mapping FOCS 1994: 780-791
16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLYaron Pinto, Ron Shamir: Efficient Algorithms for Minimum-Cost Flow Problems with Piecewise-Linear Convex Costs. Algorithmica 11(3): 256-276 (1994)
15no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEndre Boros, Peter L. Hammer, Mark E. Hartmann, Ron Shamir: Balancing Problems in Acyclic Networks. Discrete Applied Mathematics 49(1-3): 77-93 (1994)
14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaim Kaplan, Ron Shamir: The Domatic Number Problem on Some Perfect Graph Families. Inf. Process. Lett. 49(1): 51-56 (1994)
1993
13Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMartin Charles Golumbic, Haim Kaplan, Ron Shamir: Algorithms and Complexity of Sandwich Problems in Graphs (Extended Abstract). WG 1993: 57-69
12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIlan Adler, Alan J. Hoffman, Ron Shamir: Monge and Feasibility Sequences in General Flow Problems. Discrete Applied Mathematics 44(1-3): 21-38 (1993)
11Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir: A fast algorithm for constructing monge sequences in transportation problems with forbidden arcs. Discrete Mathematics 114(1-3): 435-444 (1993)
10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMartin Charles Golumbic, Ron Shamir: Complexity and Algorithms for Reasoning about Time: A Graph-Theoretic Approach. J. ACM 40(5): 1108-1133 (1993)
9Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIlan Adler, Ron Shamir: A randomized scheme for speeding up algorithms for linear and convex programming problems with high constraints-to-variables ratio. Math. Program. 61: 39-52 (1993)
1992
8no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMartin Charles Golumbic, Ron Shamir: Algorithms and Complexity for Reasoning about Time. AAAI 1992: 741-747
7Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMartin Charles Golumbic, Ron Shamir: Interval Graphs, Interval Orders and the Consistency of Temporal Events. ISTCS 1992: 32-42
6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEndre Boros, Peter L. Hammer, Ron Shamir: A Polynomial Algorithm for Balancing Acyclic Data Flow Graphs. IEEE Trans. Computers 41(11): 1380-1385 (1992)
5Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDorit S. Hochbaum, Ron Shamir, J. George Shanthikumar: A polynomial algorithm for an integer quadratic non-separable transportation problem. Math. Program. 55: 359-371 (1992)
1990
4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRon Shamir, Brenda L. Dietrich: Characterization and Algorithms for Greedily Solvable Transportation Problems. SODA 1990: 358-366
3Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDorit S. Hochbaum, Ron Shamir: Minimizing the number of tardy job units under release time constraints. Discrete Applied Mathematics 28(1): 45-57 (1990)
1989
2Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDorit S. Hochbaum, Ron Shamir: An O(n log2 n) Algorithm for the Maximum Weighted Tardiness Problem. Inf. Process. Lett. 31(4): 215-219 (1989)
1987
1Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIlan Adler, Richard M. Karp, Ron Shamir: A simplex variant solving an m times d linear program in O(min(m2, d2) expected number of pivot steps. J. Complexity 3(4): 372-387 (1987)

Coauthor Index

1Ilan Adler [1] [9] [12]
2Nira Amit [116]
3Jackie Assa [116]
4Karen B. Avraham [128]
5Mukul S. Bansal [126] [130]
6Tamar Barzuza [91] [115]
7Jacques S. Beckmann [91] [115]
8Amir Ben-Dor [35] [44] [55] [61] [66] [71]
9Yaara Ber [128]
10Piotr Berman [55]
11Shani Bialik [128]
12Ran Blekhman [116]
13Endre Boros [6] [15]
14Zippora Brownstein [128]
15Sharon Bruckner [120] [125]
16Eyal David [128]
17Ofir Davidovich [111]
18Brenda L. Dietrich [4]
19Gideon Dror [97]
20Ran Elkon [98] [116] [128]
21Irit Gat-Viks [73] [77] [79] [86] [89] [99] [101] [102] [117] [131]
22J. Peter Gogarten (Johann Peter Gogarten) [126]
23Paul W. Goldberg [18]
24Martin Charles Golumbic [7] [8] [10] [13] [18] [19]
25Dan Graur [57]
26Eran Halperin [67] [70] [100]
27Shay Halperin [67] [70]
28Yonit Halperin [127]
29Peter L. Hammer (Peter Ladislaw Hammer) [6] [15]
30Tzvika Hartman [67] [70] [103]
31Mark E. Hartmann [15]
32Erez Hartuv [41] [49]
33Masami Hasegawa [57]
34Ryan B. Hayward (Ryan Hayward) [83]
35Pavol Hell [43] [54]
36Dorit S. Hochbaum [2] [3] [5]
37Alan J. Hoffman [12]
38Falk Hüffner [120] [125]
39Trey Ideker [87] [92]
40Sorin Istrail [29] [50] [110]
41Haim Kaplan [13] [14] [17] [18] [19] [21] [22] [25] [26] [33] [34] [38]
42Richard M. Karp [1] [32] [42] [46] [48] [66] [71] [87] [89] [92] [95] [101] [109] [119] [120] [125]
43Brian P. Kelley [87] [92]
44Adi Kimchi [128]
45Gad Kimmel [75] [81] [88] [94] [96] [100] [111]
46Martin Kupiec [131]
47Jörg Lange [41]
48Hans Lehrach [41]
49Ming Li [62] [95] [109]
50Chaim Linhart [68] [93] [98] [121] [122] [127]
51Adi Maron-Katz [74] [98]
52Gilad Mass [116]
53Guy Mayraz [36] [40]
54Sebastian Meier-Ewert [41]
55Renana Meller [131]
56Assaf Natanzon [30] [39] [45] [56]
57Nir Orlev [85] [116]
58Michal Ozery-Flato [72] [105] [106] [108] [112] [114] [118] [129]
59Arnon Paz [128]
60Itsik Pe'er [20] [23] [24] [28] [42] [44] [46] [52] [53] [55] [61] [64] [78] [91] [115]
61Pavel A. Pevzner [29] [50] [62] [95] [109] [110]
62Yaron Pinto [16]
63Tal Pupko [57] [78]
64Daniela Raijman [99] [102] [113]
65Dorit Sagir [128]
66Armin O. Schmitt [41]
67Benno Schwikowski [66] [71]
68J. George Shanthikumar [5]
69Roded Sharan [30] [39] [43] [44] [45] [51] [53] [54] [55] [56] [57] [61] [63] [64] [69] [73] [74] [75] [78] [81] [82] [84] [87] [89] [92] [98] [101] [120] [125]
70Yosef Shiloh [85] [98] [116] [128]
71Rotem Sorek [97]
72Israel Steinfeld [98]
73Giora Sternberg [116]
74Firas Swidan [124]
75Amos Tanay [59] [69] [76] [79] [80] [86] [98] [99] [102] [113]
76Robert Endre Tarjan [17] [25] [26] [33] [34]
77Dekel Tsur [27] [31] [37] [58] [60] [63] [65] [82] [107]
78Igor Ulitsky [116] [119] [123] [127] [128]
79Rita Vesterman [116]
80Mali Weisz [116]
81Ydo Wexler [117]
82Zohar Yakhini [35]
83Michal Ziv-Ukelson [117]
84Idan Zohar [116]

Colors in the list of coauthors

Last update Fri May 25 01:42:58 2012 CET by the DBLP TeamThis material is Open Data Data released under the ODC-BY 1.0 license — See also our legal information page