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22Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAdrian K. Arakaki, Ying Huang, Jeffrey Skolnick: EFICAz2: enzyme function inference by a combined approach enhanced by machine learning. BMC Bioinformatics 10: (2009)
21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJeffrey Skolnick, Michal Brylinski: FINDSITE: a combined evolution/structure-based approach to protein function prediction. Briefings in Bioinformatics 10(4): 378-391 (2009)
2008
20Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLShashi Bhushan Pandit, Jeffrey Skolnick: Fr-TM-align: a new protein structural alignment method based on fragment alignments and the TM-score. BMC Bioinformatics 9: (2008)
19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Brylinski, Jeffrey Skolnick: Q-Dock: Low-resolution flexible ligand docking with pocket-specific threading restraints. Journal of Computational Chemistry 29(10): 1574-1588 (2008)
18Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRyangguk Kim, Jeffrey Skolnick: Assessment of programs for ligand binding affinity prediction. Journal of Computational Chemistry 29(8): 1316-1331 (2008)
17Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPiotr Rotkiewicz, Jeffrey Skolnick: Fast procedure for reconstruction of full-atom protein models from reduced representations. Journal of Computational Chemistry 29(9): 1460-1465 (2008)
2007
16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAnna Jagielska, Jeffrey Skolnick: Origin of intrinsic 310-helix versus strand stability in homopolypeptides and its implications for the accuracy of the Amber force field. Journal of Computational Chemistry 28(10): 1648-1657 (2007)
15Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLLiliana Wroblewska, Jeffrey Skolnick: Can a physics-based, all-atom potential find a protein's native structure among misfolded structures? I. Large scale AMBER benchmarking. Journal of Computational Chemistry 28(12): 2059-2066 (2007)
2005
14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEckart Bindewald, Jeffrey Skolnick: A scoring function for docking ligands to low-resolution protein structures. Journal of Computational Chemistry 26(4): 374-383 (2005)
2004
13Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAdrian K. Arakaki, Yang Zhang, Jeffrey Skolnick: Large-scale assessment of the utility of low-resolution protein structures for biochemical function assignment. Bioinformatics 20(7): 1087-1096 (2004)
12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLYang Zhang, Jeffrey Skolnick: SPICKER: A clustering approach to identify near-native protein folds. Journal of Computational Chemistry 25(6): 865-871 (2004)
2003
11no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichal Boniecki, Piotr Rotkiewicz, Jeffrey Skolnick, Andrzej Kolinski: Protein fragment reconstruction using various modeling techniques. Journal of Computer-Aided Molecular Design 17(11): 725-738 (2003)
2002
10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMarek Wojciechowski II, Jeffrey Skolnick: Docking of small ligands to low-resolution and theoretically predicted receptor structures. Journal of Computational Chemistry 23(1): 189-197 (2002)
2001
9no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLYury V. Bukhman, Jeffrey Skolnick: BioMolQuest: integrated database-based retrieval of protein structural and functional information. Bioinformatics 17(5): 468-478 (2001)
8Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMarcos R. Betancourt, Jeffrey Skolnick: Finding the needle in a haystack: educing native folds from ambiguous ab initio protein structure predictions. Journal of Computational Chemistry 22(3): 339-353 (2001)
1999
7Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJeffrey Skolnick, Richard H. Lathrop: Protein Structure Prediction - Session Introduction. Pacific Symposium on Biocomputing 1999: 480-481
1998
6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLBoris A. Reva, Alexei V. Finkelstein, Jeffrey Skolnick: A self-consistent field optimization approach to build energetically and geometrically correct lattice models of proteins. RECOMB 1998: 214-220
5no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLBoris A. Reva, Dmitrii S. Rykunov, Alexei V. Finkelstein, Jeffrey Skolnick: Optimization of Protein Structure on Lattices Using a Self-Consistent Field Approach. Journal of Computational Biology 5(3): 531-538 (1998)
1997
4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMariusz Milik, Andrzej Kolinski, Jeffrey Skolnick: Algorithm for rapid reconstruction of protein backbone from alpha carbon coordinates. Journal of Computational Chemistry 18(1): 80-85 (1997)
1995
3no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMariusz Milik, Jeffrey Skolnick: An Object-Oriented Environment for Artifical Evolution of Protein Sequences: The Example of Rational Design of Transmembrane Sequences. Evolutionary Programming 1995: 603-613
1994
2no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAdam Godzik, Jeffrey Skolnick: Flexible algorithm for direct multiple alignment of protein structures and sequences. Computer Applications in the Biosciences 10(6): 587-596 (1994)
1993
1no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAdam Godzik, Andrzej Kolinski, Jeffrey Skolnick: De novo and inverse folding predictions of protein structure and dynamics. Journal of Computer-Aided Molecular Design 7(4): 397-438 (1993)

Coauthor Index

1Adrian K. Arakaki [13] [22]
2Marcos R. Betancourt [8]
3Eckart Bindewald [14]
4Michal Boniecki [11]
5Michal Brylinski [19] [21]
6Yury V. Bukhman [9]
7Alexei V. Finkelstein [5] [6]
8Adam Godzik [1] [2]
9Ying Huang [22]
10Anna Jagielska [16]
11Ryangguk Kim [18]
12Andrzej Kolinski [1] [4] [11]
13Richard H. Lathrop [7]
14Mariusz Milik [3] [4]
15Shashi Bhushan Pandit [20]
16Boris A. Reva [5] [6]
17Piotr Rotkiewicz [11] [17]
18Dmitrii S. Rykunov [5]
19Marek Wojciechowski II [10]
20Liliana Wroblewska [15]
21Yang Zhang [12] [13]

Colors in the list of coauthors

Copyright © Fri Nov 27 15:43:12 2009 by Michael Ley (ley@uni-trier.de)