 | 2009 |
| 8 |  | Navdeep Jaitly,
Anoop M. Mayampurath,
Kyle Littlefield,
Joshua N. Adkins,
Gordon A. Anderson,
Richard D. Smith:
Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data.
BMC Bioinformatics 10: (2009) |
| 7 |  | Yuliya V. Karpievitch,
Jeff Stanley,
Thomas Taverner,
Jianhua Huang,
Joshua N. Adkins,
Charles Ansong,
Fred Heffron,
Thomas O. Metz,
Wei-Jun Qian,
Hyunjin Yoon,
Richard D. Smith,
Alan R. Dabney:
A statistical framework for protein quantitation in bottom-up MS-based proteomics.
Bioinformatics 25(16): 2028-2034 (2009) |
| 6 |  | Yuliya V. Karpievitch,
Thomas Taverner,
Joshua N. Adkins,
Stephen J. Callister,
Gordon A. Anderson,
Richard D. Smith,
Alan R. Dabney:
Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition.
Bioinformatics 25(19): 2573-2580 (2009) |
| 2008 |
| 5 |  | Ashoka D. Polpitiya,
Wei-Jun Qian,
Navdeep Jaitly,
Vladislav A. Petyuk,
Joshua N. Adkins,
David G. Camp II,
Gordon A. Anderson,
Richard D. Smith:
DAnTE: a statistical tool for quantitative analysis of -omics data.
Bioinformatics 24(13): 1556-1558 (2008) |
| 4 |  | Anoop M. Mayampurath,
Navdeep Jaitly,
Samuel O. Purvine,
Matthew E. Monroe,
Kenneth J. Auberry,
Joshua N. Adkins,
Richard D. Smith:
DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra.
Bioinformatics 24(7): 1021-1023 (2008) |
| 3 |  | Matthew E. Monroe,
Jason L. Shaw,
Don Simone Daly,
Joshua N. Adkins,
Richard D. Smith:
MASIC: A software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC-MS(/MS) features.
Computational Biology and Chemistry 32(3): 215-217 (2008) |
| 2 |  | Mark L. Benson,
Richard D. Smith,
Nickolay A. Khazanov,
Brandon Dimcheff,
John E. Beaver,
Peter Dresslar,
Jason Nerothin,
Heather A. Carlson:
Binding MOAD, a high-quality protein-ligand database.
Nucleic Acids Research 36(Database-Issue): 674-678 (2008) |
| 2007 |
| 1 |  | Matthew E. Monroe,
Nikola Tolic,
Navdeep Jaitly,
Jason L. Shaw,
Joshua N. Adkins,
Richard D. Smith:
VIPER: an advanced software package to support high-throughput LC-MS peptide identification.
Bioinformatics 23(15): 2021-2023 (2007) |